RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 CCNE1P24864 410 aa21.1■□□□□ 0.97
CBX1-202ENST00000393408 KRT83P78385 493 aa21.1■□□□□ 0.97
CBX1-202ENST00000393408 PAPD7Q5XG87 772 aaKnown RBP21.1■□□□□ 0.97
CBX1-202ENST00000393408 CABP7Q86V35 215 aa21.1■□□□□ 0.97
CBX1-202ENST00000393408 NBPF5PQ86XG9 351 aaPredicted RBP21.1■□□□□ 0.97
CBX1-202ENST00000393408 P2RX5Q93086 422 aa21.1■□□□□ 0.97
CBX1-202ENST00000393408 TMEM47Q9BQJ4 181 aa21.1■□□□□ 0.97
CBX1-202ENST00000393408 NUP58Q9BVL2 599 aa21.1■□□□□ 0.97
CBX1-202ENST00000393408 TFR2Q9UP52 801 aa21.1■□□□□ 0.97
CBX1-202ENST00000393408 ATP1A1P05023 1023 aaKnown RBP21.09■□□□□ 0.97
CBX1-202ENST00000393408 RETREG2Q8NC44 543 aa21.09■□□□□ 0.97
CBX1-202ENST00000393408 TRIM9Q9C026 710 aa21.09■□□□□ 0.97
CBX1-202ENST00000393408 ZMYND12Q9H0C1 365 aa21.09■□□□□ 0.97
CBX1-202ENST00000393408 AGPAT5Q9NUQ2 364 aa21.09■□□□□ 0.97
CBX1-202ENST00000393408 LDHBP07195 334 aaKnown RBP21.09■□□□□ 0.97
CBX1-202ENST00000393408 OR52Z1P0C646 297 aa21.09■□□□□ 0.97
CBX1-202ENST00000393408 TXNRD1Q16881 649 aa21.09■□□□□ 0.97
CBX1-202ENST00000393408 SLC44A5Q8NCS7 719 aa21.09■□□□□ 0.97
CBX1-202ENST00000393408 SETDB2Q96T68 719 aa21.09■□□□□ 0.97
CBX1-202ENST00000393408 LZTS2Q9BRK4 669 aa21.09■□□□□ 0.97
CBX1-202ENST00000393408 VPS18Q9P253 973 aa21.09■□□□□ 0.97
CBX1-202ENST00000393408 BICDL2A1A5D9 508 aa21.08■□□□□ 0.97
CBX1-202ENST00000393408 N4BP1O75113 896 aaKnown RBP21.08■□□□□ 0.97
CBX1-202ENST00000393408 TM4SF1P30408 202 aa21.08■□□□□ 0.97
CBX1-202ENST00000393408 ANKRD40Q6AI12 368 aa21.08■□□□□ 0.97
CBX1-202ENST00000393408 ZNF444Q8N0Y2 327 aaPredicted RBP21.08■□□□□ 0.97
CBX1-202ENST00000393408 CCDC24Q8N4L8 307 aa21.08■□□□□ 0.97
CBX1-202ENST00000393408 JAKMIP2Q96AA8 810 aa21.08■□□□□ 0.97
CBX1-202ENST00000393408 CNOT6LQ96LI5 555 aaKnown RBP21.08■□□□□ 0.97
CBX1-202ENST00000393408 C7orf25Q9BPX7 421 aa21.08■□□□□ 0.97
CBX1-202ENST00000393408 NARFQ9UHQ1 456 aa21.08■□□□□ 0.97
CBX1-202ENST00000393408 MTMR7Q9Y216 660 aa21.08■□□□□ 0.97
CBX1-202ENST00000393408 SAR1BQ9Y6B6 198 aa21.08■□□□□ 0.97
CBX1-202ENST00000393408 CYLC1P35663 651 aaPredicted RBP21.08■□□□□ 0.96
CBX1-202ENST00000393408 KLK7P49862 253 aa21.08■□□□□ 0.96
CBX1-202ENST00000393408 USP14P54578 494 aa21.08■□□□□ 0.96
CBX1-202ENST00000393408 ZBED6P86452 979 aa21.08■□□□□ 0.96
CBX1-202ENST00000393408 PDE4DQ08499 809 aa21.08■□□□□ 0.96
CBX1-202ENST00000393408 BARGINQ6ZT62 677 aa21.08■□□□□ 0.96
CBX1-202ENST00000393408 KRT25Q7Z3Z0 450 aa21.08■□□□□ 0.96
CBX1-202ENST00000393408 KIAA1328Q86T90 577 aa21.08■□□□□ 0.96
CBX1-202ENST00000393408 EHBP1Q8NDI1 1231 aa21.08■□□□□ 0.96
CBX1-202ENST00000393408 CCDC47Q96A33 483 aaKnown RBP21.08■□□□□ 0.96
CBX1-202ENST00000393408 SRP68Q9UHB9 627 aaKnown RBP21.08■□□□□ 0.96
CBX1-202ENST00000393408 GOLGA8HP0CJ92 632 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 TRIM21P19474 475 aaKnown RBP21.07■□□□□ 0.96
CBX1-202ENST00000393408 LMAN1P49257 510 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 TBC1D8BQ0IIM8 1120 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 STK4Q13043 487 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 AMOTL1Q8IY63 956 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 WDR66Q8TBY9 1149 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 MMS19Q96T76 1030 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 SPZ1Q9BXG8 430 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 NHEJ1Q9H9Q4 299 aaPredicted RBP21.07■□□□□ 0.96
CBX1-202ENST00000393408 STX8Q9UNK0 236 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 RCCD1A6NED2 376 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 EIF3CLB5ME19 914 aaKnown RBP21.07■□□□□ 0.96
CBX1-202ENST00000393408 KLRF2D3W0D1 207 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 TULP2O00295 520 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 KRT86O43790 486 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 RASA1P20936 1047 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 PPP4CP60510 307 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 FAM114A1Q8IWE2 563 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 CCDC170Q8IYT3 715 aa21.07■□□□□ 0.96
CBX1-202ENST00000393408 EIF3CQ99613 913 aaKnown RBP21.07■□□□□ 0.96
CBX1-202ENST00000393408 ZNHIT6Q9NWK9 470 aaKnown RBP21.07■□□□□ 0.96
CBX1-202ENST00000393408 ASIC1P78348 528 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 DIXDC1Q155Q3 683 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 ZSCAN26Q16670 478 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 MIIPQ5JXC2 388 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 EEF2KMTQ96G04 330 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 LACRTQ9GZZ8 138 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 CDK5RAP2Q96SN8 1893 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 LRRIQ3A6PVS8 624 aaPredicted RBP21.06■□□□□ 0.96
CBX1-202ENST00000393408 CCNT1O60563 726 aaKnown RBP21.06■□□□□ 0.96
CBX1-202ENST00000393408 SRGAP2O75044 1071 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 PPP1R2P41236 205 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 NAPAP54920 295 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 NONOQ15233 471 aaKnown RBP eCLIP21.06■□□□□ 0.96
CBX1-202ENST00000393408 GRIK5Q16478 980 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 LETM2Q2VYF4 491 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 ZSCAN29Q8IWY8 852 aaPredicted RBP21.06■□□□□ 0.96
CBX1-202ENST00000393408 TGFBRAP1Q8WUH2 860 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 FAN1Q9Y2M0 1017 aa21.06■□□□□ 0.96
CBX1-202ENST00000393408 BAG3O95817 575 aa21.05■□□□□ 0.96
CBX1-202ENST00000393408 FCER1AP12319 257 aa21.05■□□□□ 0.96
CBX1-202ENST00000393408 GSTO1P78417 241 aa21.05■□□□□ 0.96
CBX1-202ENST00000393408 FIGNQ5HY92 759 aa21.05■□□□□ 0.96
CBX1-202ENST00000393408 ERGIC2Q96RQ1 377 aa21.05■□□□□ 0.96
CBX1-202ENST00000393408 CPVLQ9H3G5 476 aa21.05■□□□□ 0.96
CBX1-202ENST00000393408 A0A1W2PQJ5 194 aa21.05■□□□□ 0.96
CBX1-202ENST00000393408 MTIF2P46199 727 aaKnown RBP21.05■□□□□ 0.96
CBX1-202ENST00000393408 CDK17Q00537 523 aa21.05■□□□□ 0.96
CBX1-202ENST00000393408 COBLL1Q53SF7 1204 aa21.05■□□□□ 0.96
CBX1-202ENST00000393408 TPTE2Q6XPS3 522 aa21.05■□□□□ 0.96
CBX1-202ENST00000393408 RPGRIP1Q96KN7 1286 aa21.05■□□□□ 0.96
CBX1-202ENST00000393408 PURBQ96QR8 312 aaKnown RBP21.05■□□□□ 0.96
CBX1-202ENST00000393408 TNRC6CQ9HCJ0 1690 aaKnown RBP21.04■□□□□ 0.96
CBX1-202ENST00000393408 SNED1Q8TER0 1413 aa21.04■□□□□ 0.96
CBX1-202ENST00000393408 GOLGA5Q8TBA6 731 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms