RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 RPN1P04843 607 aaKnown RBP12.79□□□□□ -0.36
PDCD4-202ENST00000393104 FAM153BP0C7A2 387 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 UBXN1Q04323 297 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 WTAPQ15007 396 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 FAM153CQ494X1 144 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 RRAGBQ5VZM2 374 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 ZSCAN29Q8IWY8 852 aaPredicted RBP12.79□□□□□ -0.36
PDCD4-202ENST00000393104 IQCKQ8N0W5 287 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 CCDC148Q8NFR7 591 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 EEF2KMTQ96G04 330 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 NHEJ1Q9H9Q4 299 aaPredicted RBP12.79□□□□□ -0.36
PDCD4-202ENST00000393104 ARHGAP20Q9P2F6 1191 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 FAM153AQ9UHL3 310 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 TNRC6CQ9HCJ0 1690 aaKnown RBP12.79□□□□□ -0.36
PDCD4-202ENST00000393104 GTPBP6O43824 516 aaPredicted RBP12.79□□□□□ -0.36
PDCD4-202ENST00000393104 ZBTB48P10074 688 aaPredicted RBP12.79□□□□□ -0.36
PDCD4-202ENST00000393104 LIG3P49916 1009 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 WASF1Q92558 559 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 RIOK1Q9BRS2 568 aaKnown RBP12.79□□□□□ -0.36
PDCD4-202ENST00000393104 PAGR1Q9BTK6 254 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 TOMM22Q9NS69 142 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 SNX12Q9UMY4 172 aa12.79□□□□□ -0.36
PDCD4-202ENST00000393104 BHMG1C9JSJ3 638 aaPredicted RBP12.78□□□□□ -0.36
PDCD4-202ENST00000393104 HNRNPH3P31942 346 aaKnown RBP12.78□□□□□ -0.36
PDCD4-202ENST00000393104 SLC7A5Q01650 507 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 MFSD6Q6ZSS7 791 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 GBP3Q9H0R5 595 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 LRRC4CQ9HCJ2 640 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 V9GY48 417 aaPredicted RBP12.78□□□□□ -0.36
PDCD4-202ENST00000393104 ZSCAN5CA6NGD5 496 aaPredicted RBP12.78□□□□□ -0.36
PDCD4-202ENST00000393104 ITIH3Q06033 890 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 CEP89Q96ST8 783 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 FAM184BQ9ULE4 1060 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 NMT2O60551 498 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 ECHS1P30084 290 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 CCDC122Q5T0U0 273 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 CPLX2Q6PUV4 134 aaKnown RBP12.78□□□□□ -0.36
PDCD4-202ENST00000393104 FBXO41Q8TF61 875 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 SDR42E1Q8WUS8 393 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 KRT23Q9C075 422 aa12.78□□□□□ -0.36
PDCD4-202ENST00000393104 B4DLN1 442 aa12.77□□□□□ -0.36
PDCD4-202ENST00000393104 TRIM14Q14142 442 aa12.77□□□□□ -0.36
PDCD4-202ENST00000393104 SH2D3CQ8N5H7 860 aa12.77□□□□□ -0.36
PDCD4-202ENST00000393104 GIMAP8Q8ND71 665 aaPredicted RBP12.77□□□□□ -0.36
PDCD4-202ENST00000393104 NAPBQ9H115 298 aa12.77□□□□□ -0.36
PDCD4-202ENST00000393104 TMEM60Q9H2L4 133 aa12.77□□□□□ -0.36
PDCD4-202ENST00000393104 CNNM2Q9H8M5 875 aa12.77□□□□□ -0.36
PDCD4-202ENST00000393104 MLXIPQ9HAP2 919 aa12.77□□□□□ -0.36
PDCD4-202ENST00000393104 ATXN2Q99700 1313 aaKnown RBP12.77□□□□□ -0.36
PDCD4-202ENST00000393104 PLSCR1O15162 318 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 KRT2P35908 639 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 TTC38Q5R3I4 469 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 C6orf89Q6UWU4 347 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 SPATA4Q8NEY3 305 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 KBTBD4Q9NVX7 518 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 SIK3Q9Y2K2 1263 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 ANO9A1A5B4 782 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 TNFRSF8P28908 595 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 CDK17Q00537 523 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 SKIDA1Q1XH10 827 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 MCTP2Q6DN12 878 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 FAM228AQ86W67 206 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 CAVIN3Q969G5 261 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 TLR10Q9BXR5 811 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 CCNL1Q9UK58 526 aaPredicted RBP12.77□□□□□ -0.37
PDCD4-202ENST00000393104 CEP131Q9UPN4 1083 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 SAMM50Q9Y512 469 aa12.77□□□□□ -0.37
PDCD4-202ENST00000393104 MYO1FO00160 1098 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 GLI1P08151 1106 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 BYSLQ13895 437 aaKnown RBP12.76□□□□□ -0.37
PDCD4-202ENST00000393104 KCTD19Q17RG1 926 aaPredicted RBP12.76□□□□□ -0.37
PDCD4-202ENST00000393104 TMTC3Q6ZXV5 915 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 TNNT3P45378 269 aaPredicted RBP12.76□□□□□ -0.37
PDCD4-202ENST00000393104 PPFIA1Q13136 1202 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 NFRKBQ6P4R8 1299 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 MIGA1Q8NAN2 632 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 ZIM3Q96PE6 472 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 MAST2Q6P0Q8 1798 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 H7C1D1 291 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 EDIL3O43854 480 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 KRT14P02533 472 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 RCSD1Q6JBY9 416 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 SH2D4AQ9H788 454 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 LRWD1Q9UFC0 647 aa12.76□□□□□ -0.37
PDCD4-202ENST00000393104 GOLGA6CA6NDK9 693 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 RHOBTB3O94955 611 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 GOLGA6DP0CG33 693 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 GPTP24298 496 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 BCAMP50895 628 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 APBA1Q02410 837 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 SAFBQ15424 915 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDCD4-202ENST00000393104 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
PDCD4-202ENST00000393104 ANKRD40Q6AI12 368 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 TRIM22Q8IYM9 498 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 GOLGA6AQ9NYA3 693 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 KAT6BQ8WYB5 2073 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 GOLGA6BA6NDN3 693 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 PRLRP16471 622 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms