RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 TULP4Q9NRJ4 1543 aa8.38□□□□□ -1.07
VTI1A-201ENST00000393077 SNRPA1P09661 255 aaKnown RBP8.38□□□□□ -1.07
VTI1A-201ENST00000393077 MLH1P40692 756 aa8.38□□□□□ -1.07
VTI1A-201ENST00000393077 RNASE9P60153 205 aaKnown RBP8.38□□□□□ -1.07
VTI1A-201ENST00000393077 ADCK5Q3MIX3 580 aa8.38□□□□□ -1.07
VTI1A-201ENST00000393077 CFAP221Q4G0U5 840 aa8.38□□□□□ -1.07
VTI1A-201ENST00000393077 BEND3Q5T5X7 828 aa8.38□□□□□ -1.07
VTI1A-201ENST00000393077 KANK3Q6NY19 840 aa8.38□□□□□ -1.07
VTI1A-201ENST00000393077 MIER3Q7Z3K6 550 aa8.38□□□□□ -1.07
VTI1A-201ENST00000393077 PHLDB2Q86SQ0 1253 aa8.38□□□□□ -1.07
VTI1A-201ENST00000393077 AGAP11Q8TF27 550 aa8.38□□□□□ -1.07
VTI1A-201ENST00000393077 DRC3Q9H069 523 aa8.38□□□□□ -1.07
VTI1A-201ENST00000393077 VPS16Q9H269 839 aa8.38□□□□□ -1.07
VTI1A-201ENST00000393077 STOML1Q9UBI4 398 aa8.38□□□□□ -1.07
VTI1A-201ENST00000393077 AATKQ6ZMQ8 1374 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 KRT38O76015 456 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 RPS6KB1P23443 525 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 SERPINB3P29508 390 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 SKOR1P84550 965 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 UBXN1Q04323 297 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 TRIM14Q14142 442 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 HSP90AA5PQ58FG0 334 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 DDX46Q7L014 1031 aaKnown RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 ST13P4Q8IZP2 240 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 NME8Q8N427 588 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 RRP36Q96EU6 259 aaKnown RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 NAP1L3Q99457 506 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 YIPF2Q9BWQ6 316 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 ECT2Q9H8V3 914 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 KCNK9Q9NPC2 374 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 INTS9Q9NV88 658 aaKnown RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 NFU1Q9UMS0 254 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 PCDHGA4Q9Y5G9 962 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 NEXMIFQ5QGS0 1516 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 PHF20L1A8MW92 1017 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 IPO5O00410 1097 aaKnown RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 ZSCAN9O15535 394 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 PFKFB1P16118 471 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 DMPKQ09013 629 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 SPTY2D1Q68D10 685 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 CDCA2Q69YH5 1023 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 RAB3IL1Q8TBN0 382 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 WDR60Q8WVS4 1066 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 TEKT1Q969V4 418 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 KIFC2Q96AC6 838 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 IQCDQ96DY2 449 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 CHMP6Q96FZ7 201 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 NGLY1Q96IV0 654 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 UIMC1Q96RL1 719 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 NUDCD1Q96RS6 583 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 RANBP17Q9H2T7 1088 aaKnown RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 GOLPH3LQ9H4A5 285 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 DIP2BQ9P265 1576 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 NPHP4O75161 1426 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 A0A1W2PQ27 194 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 A0A1W2PQ64 194 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 A0A1W2PQD8 194 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 DPPA5A6NC42 116 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 HEXIM1O94992 359 aaKnown RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 STARD3NLO95772 234 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 TCP1P17987 556 aaKnown RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 RFC1P35251 1148 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 RFC5P40937 340 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 ANKRD13DQ6ZTN6 518 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 SREK1Q8WXA9 508 aaKnown RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 ATP6V0A1Q93050 837 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 MCUR1Q96AQ8 359 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 EVI5LQ96CN4 794 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 BORCS6Q96GS4 357 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 ANKRD27Q96NW4 1050 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 ZIM3Q96PE6 472 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 CNOT10Q9H9A5 744 aaKnown RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 TUBA8Q9NY65 449 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-201ENST00000393077 PLAAQ9Y263 795 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 ABCC4O15439 1325 aa8.37□□□□□ -1.07
VTI1A-201ENST00000393077 TCHHQ07283 1943 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 TXNDC9O14530 226 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 ZNF131P52739 623 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 TDRD12Q587J7 1177 aaKnown RBP8.36□□□□□ -1.07
VTI1A-201ENST00000393077 KLHL7Q8IXQ5 586 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 BOLA2Q9H3K6 86 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 DMAP1Q9NPF5 467 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-201ENST00000393077 GGA2Q9UJY4 613 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 RABGAP1Q9Y3P9 1069 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 CLTCQ00610 1675 aaKnown RBP8.36□□□□□ -1.07
VTI1A-201ENST00000393077 PPP2R2AP63151 447 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 RESTQ13127 1097 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 GALNT17Q6IS24 598 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 MTHFD1LQ6UB35 978 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 GET4Q7L5D6 327 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-201ENST00000393077 RHPN1Q8TCX5 695 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 OLFM3Q96PB7 478 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 CNNM1Q9NRU3 951 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 ECHDC1Q9NTX5 307 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 TMCO1Q9UM00 188 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 UNC5CLQ8IV45 518 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 PHC3Q8NDX5 983 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 LRRC8CQ8TDW0 803 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 KIFAP3Q92845 792 aa8.36□□□□□ -1.07
VTI1A-201ENST00000393077 RBM17Q96I25 401 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms