RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 HTATIP2Q9BUP3 242 aa10.06□□□□□ -0.8
TRAV17-201ENST00000390445 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRAV17-201ENST00000390445 PUS7LQ9H0K6 701 aaKnown RBP10.06□□□□□ -0.8
TRAV17-201ENST00000390445 CHMP4BQ9H444 224 aaKnown RBP10.06□□□□□ -0.8
TRAV17-201ENST00000390445 RABGAP1Q9Y3P9 1069 aa10.06□□□□□ -0.8
TRAV17-201ENST00000390445 USP17L12C9JPN9 530 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 USP17L21D6R901 530 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 ZKSCAN1P17029 563 aaPredicted RBP10.05□□□□□ -0.8
TRAV17-201ENST00000390445 CCND3P30281 292 aaPredicted RBP10.05□□□□□ -0.8
TRAV17-201ENST00000390445 MAPK4P31152 587 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 CDK8P49336 464 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 PRR20EP86478 221 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 PRR20CP86479 221 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 PRR20DP86480 221 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 PRR20BP86481 221 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 PRR20AP86496 221 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 CACNB2Q08289 660 aaPredicted RBP10.05□□□□□ -0.8
TRAV17-201ENST00000390445 MAP3K21Q5TCX8 1036 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 SIAH1Q8IUQ4 282 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 STK11IPQ8N1F8 1099 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 SOCS4Q8WXH5 440 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 FLRT1Q9NZU1 646 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 MAP4K5Q9Y4K4 846 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 SLC4A4Q9Y6R1 1079 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 LCTP09848 1927 aa10.05□□□□□ -0.8
TRAV17-201ENST00000390445 XRCC5P13010 732 aaKnown RBP10.04□□□□□ -0.8
TRAV17-201ENST00000390445 RGS2P41220 211 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 GRM5P41594 1212 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 UBE3CQ15386 1083 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 C12orf60Q5U649 245 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 LBX2Q6XYB7 198 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 TMEM179Q6ZVK1 233 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 VASH1Q7L8A9 365 aaPredicted RBP10.04□□□□□ -0.8
TRAV17-201ENST00000390445 SPICE1Q8N0Z3 855 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 NPLOC4Q8TAT6 608 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 GTF3C2Q8WUA4 911 aaPredicted RBP10.04□□□□□ -0.8
TRAV17-201ENST00000390445 CALR3Q96L12 384 aaKnown RBP10.04□□□□□ -0.8
TRAV17-201ENST00000390445 UCN2Q96RP3 112 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 APBA2Q99767 749 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 TANGO6Q9C0B7 1094 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 DCTPP1Q9H773 170 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 CWC22Q9HCG8 908 aaKnown RBP10.04□□□□□ -0.8
TRAV17-201ENST00000390445 ATP8A2Q9NTI2 1148 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 ECHDC1Q9NTX5 307 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 TOR4AQ9NXH8 423 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 SWAP70Q9UH65 585 aa10.04□□□□□ -0.8
TRAV17-201ENST00000390445 PIK3CDO00329 1044 aa10.03□□□□□ -0.8
TRAV17-201ENST00000390445 ICA1Q05084 483 aa10.03□□□□□ -0.8
TRAV17-201ENST00000390445 CTR9Q6PD62 1173 aa10.03□□□□□ -0.8
TRAV17-201ENST00000390445 C16orf86Q6ZW13 317 aa10.03□□□□□ -0.8
TRAV17-201ENST00000390445 NECAB2Q7Z6G3 386 aa10.03□□□□□ -0.8
TRAV17-201ENST00000390445 C7orf61Q8IZ16 206 aa10.03□□□□□ -0.8
TRAV17-201ENST00000390445 OTUD7AQ8TE49 926 aaPredicted RBP10.03□□□□□ -0.8
TRAV17-201ENST00000390445 KCTD15Q96SI1 283 aaPredicted RBP10.03□□□□□ -0.8
TRAV17-201ENST00000390445 PFASO15067 1338 aa10.03□□□□□ -0.8
TRAV17-201ENST00000390445 ESPNB1AK53 854 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 J3QL48 77 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 M0R2C6 588 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 FLOT1O75955 427 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 ADH1CP00326 375 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 EEF2P13639 858 aaKnown RBP10.02□□□□□ -0.81
TRAV17-201ENST00000390445 FSHRP23945 695 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 MCCD1P59942 119 aaPredicted RBP10.02□□□□□ -0.81
TRAV17-201ENST00000390445 CCNA1P78396 465 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 ATP2B2Q01814 1243 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 GRB14Q14449 540 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 COG2Q14746 738 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 NBPF20Q3BBV1 942 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 SNIP1Q8TAD8 396 aaKnown RBP10.02□□□□□ -0.81
TRAV17-201ENST00000390445 OSBP2Q969R2 916 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 ATG4CQ96DT6 458 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 STRBPQ96SI9 672 aaKnown RBP10.02□□□□□ -0.81
TRAV17-201ENST00000390445 MOV10L1Q9BXT6 1211 aaKnown RBP10.02□□□□□ -0.81
TRAV17-201ENST00000390445 PRO3102Q9H379 93 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 VCPKMTQ9H867 229 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 OGDHLQ9ULD0 1010 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 ZMYND8Q9ULU4 1186 aaPredicted RBP10.02□□□□□ -0.81
TRAV17-201ENST00000390445 TMX2Q9Y320 296 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 NR2E3Q9Y5X4 410 aa10.02□□□□□ -0.81
TRAV17-201ENST00000390445 LAMA4Q16363 1823 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 SLC15A5A6NIM6 579 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 GSG1L2A8MUP6 293 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 SYN1P17600 705 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 ERCC3P19447 782 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 CYP2C19P33261 490 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 PLS1Q14651 629 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 INTS6LQ5JSJ4 861 aaKnown RBP10.01□□□□□ -0.81
TRAV17-201ENST00000390445 ZSCAN25Q6NSZ9 544 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 CYP4X1Q8N118 509 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 PHTF2Q8N3S3 785 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 KBTBD3Q8NAB2 608 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 TRPV1Q8NER1 839 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 SEC62Q99442 399 aaKnown RBP10.01□□□□□ -0.81
TRAV17-201ENST00000390445 SPATC1LQ9H0A9 340 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 C11orf49Q9H6J7 331 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 ARHGEF10LQ9HCE6 1279 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 EPB41L4AQ9HCS5 686 aaPredicted RBP10.01□□□□□ -0.81
TRAV17-201ENST00000390445 FBXO28Q9NVF7 368 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 STAP2Q9UGK3 403 aa10.01□□□□□ -0.81
TRAV17-201ENST00000390445 CDV3Q9UKY7 258 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms