RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 GJD2Q9UKL4 321 aa8.33□□□□□ -1.08
TRAV12-3-201ENST00000390442 TAF6LQ9Y6J9 622 aa8.33□□□□□ -1.08
TRAV12-3-201ENST00000390442 USP17L15C9J2P7 530 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 USP17L13C9JLJ4 530 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 USP17L11C9JVI0 530 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 USP17L18D6R9N7 530 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 USP17L22D6RA61 530 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 USP17L17D6RBQ6 530 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 USP17L19D6RCP7 530 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 USP17L20D6RJB6 530 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 HIP1O00291 1037 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 MPHOSPH10O00566 681 aaKnown RBP8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 NMT2O60551 498 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 IGHA2P01877 340 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 SYN1P17600 705 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 BMP8BP34820 402 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 PSEN2P49810 448 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 USP14P54578 494 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 MARSP56192 900 aaKnown RBP8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 HERVK_113P62684 666 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 ICA1Q05084 483 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 USP17L24Q0WX57 530 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 ZYXQ15942 572 aaKnown RBP8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 FAM47AQ5JRC9 791 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 SWT1Q5T5J6 900 aaKnown RBP8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 RCSD1Q6JBY9 416 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 ANKRD13CQ8N6S4 541 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 REPS2Q8NFH8 660 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 STAG1Q8WVM7 1258 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 COA7Q96BR5 231 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 GDF15Q99988 308 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 SCUBE2Q9NQ36 999 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 BTBD7Q9P203 1132 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 SEPT9Q9UHD8 586 aaPredicted RBP8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 STXBP5LQ9Y2K9 1186 aa8.32□□□□□ -1.08
TRAV12-3-201ENST00000390442 NEDD4P46934 1319 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 RAD50Q92878 1312 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 ZNFX1Q9P2E3 1918 aaKnown RBP8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 F5H6K3 240 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 MAGEA10P43363 369 aaPredicted RBP8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 GCLCP48506 637 aaPredicted RBP8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 HAND2P61296 217 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 TFAP4Q01664 338 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 KLRC3Q07444 240 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 ERICH6BQ5W0A0 696 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 RASGRP2Q7LDG7 609 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 NPAS4Q8IUM7 802 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 AMOTL1Q8IY63 956 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 TDHQ8IZJ6 230 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 ANKLE1Q8NAG6 615 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 GIPC2Q8TF65 315 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 SREK1Q8WXA9 508 aaKnown RBP8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 LPAR1Q92633 364 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 USP6NLQ92738 828 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 MAP4K1Q92918 833 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 DRC1Q96MC2 740 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 LSG1Q9H089 658 aaKnown RBP8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 PORCNQ9H237 461 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 RPAP3Q9H6T3 665 aaPredicted RBP8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 DIAPH3Q9NSV4 1193 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 TCP11L1Q9NUJ3 509 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 FBXO28Q9NVF7 368 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 TMOD4Q9NZQ9 345 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 SYNPO2Q9UMS6 1093 aa8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 LAMA2P24043 3122 aaKnown RBP8.31□□□□□ -1.08
TRAV12-3-201ENST00000390442 WDR46O15213 610 aaKnown RBP8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 NDUFB10O96000 172 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 HMGCRP04035 888 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 CYP21A2P08686 494 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 ERVK-9P63128 1117 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 ERVK-24P63145 666 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 PDE4BQ07343 736 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 LRIT3Q3SXY7 679 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 AKNAD1Q5T1N1 836 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 DESI1Q6ICB0 168 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 STOX1Q6ZVD7 989 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 ZNF444Q8N0Y2 327 aaPredicted RBP8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 SPICE1Q8N0Z3 855 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 GMCL1P1Q8NEA9 526 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 C1orf216Q8TAB5 229 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 ZNF592Q92610 1267 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 ANKS1AQ92625 1134 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 CCDC136Q96JN2 1154 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 NUP88Q99567 741 aaPredicted RBP8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 COL25A1Q9BXS0 654 aaPredicted RBP8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 UBE2OQ9C0C9 1292 aaKnown RBP8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 MKNK2Q9HBH9 465 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 ARHGEF10LQ9HCE6 1279 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 MTMR10Q9NXD2 777 aa8.3□□□□□ -1.08
TRAV12-3-201ENST00000390442 VCANP13611 3396 aa8.29□□□□□ -1.08
TRAV12-3-201ENST00000390442 ZBBXA8MT70 800 aa8.29□□□□□ -1.08
TRAV12-3-201ENST00000390442 LZTS3O60299 673 aaPredicted RBP8.29□□□□□ -1.08
TRAV12-3-201ENST00000390442 TTLL1O95922 423 aa8.29□□□□□ -1.08
TRAV12-3-201ENST00000390442 SNHG28P0DPA3 235 aa8.29□□□□□ -1.08
TRAV12-3-201ENST00000390442 PCP11498 1178 aaKnown RBP8.29□□□□□ -1.08
TRAV12-3-201ENST00000390442 SKIP12755 728 aa8.29□□□□□ -1.08
TRAV12-3-201ENST00000390442 HOXB1P14653 301 aaPredicted RBP8.29□□□□□ -1.08
TRAV12-3-201ENST00000390442 PABPC4Q13310 644 aaKnown RBP eCLIP8.29□□□□□ -1.08
TRAV12-3-201ENST00000390442 COG2Q14746 738 aa8.29□□□□□ -1.08
TRAV12-3-201ENST00000390442 SWI5Q1ZZU3 235 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms