RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 LNPKQ9C0E8 428 aa13.06□□□□□ -0.32
TRAV3-201ENST00000390425 RANBP17Q9H2T7 1088 aaKnown RBP13.06□□□□□ -0.32
TRAV3-201ENST00000390425 SCN10AQ9Y5Y9 1956 aa13.06□□□□□ -0.32
TRAV3-201ENST00000390425 ELP1O95163 1332 aa13.06□□□□□ -0.32
TRAV3-201ENST00000390425 SPTBN5Q9NRC6 3674 aaKnown RBP13.06□□□□□ -0.32
TRAV3-201ENST00000390425 TTC28Q96AY4 2481 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 SCN5AQ14524 2016 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 HSPD1P10809 573 aaKnown RBP13.05□□□□□ -0.32
TRAV3-201ENST00000390425 SLC16A2P36021 539 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 BEX3Q00994 111 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 FPGSQ05932 587 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 CCDC96Q2M329 555 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 BTNL9Q6UXG8 535 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 TBC1D10CQ8IV04 446 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 PCSK9Q8NBP7 692 aaKnown RBP13.05□□□□□ -0.32
TRAV3-201ENST00000390425 DCAF4Q8WV16 495 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 RNPC3Q96LT9 517 aaKnown RBP13.05□□□□□ -0.32
TRAV3-201ENST00000390425 GLT1D1Q96MS3 346 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 TMEM47Q9BQJ4 181 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 CYP39A1Q9NYL5 469 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 CCPG1Q9ULG6 757 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 GNEQ9Y223 722 aaKnown RBP13.05□□□□□ -0.32
TRAV3-201ENST00000390425 CCDC171Q6TFL3 1326 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 KIAA1217Q5T5P2 1943 aa13.05□□□□□ -0.32
TRAV3-201ENST00000390425 DCDC2CA8MYV0 355 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 ARVCFO00192 962 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 TIMP1P01033 207 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 ICAM1P05362 532 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 SMPD1P17405 629 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 HAND2P61296 217 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 TNFAIP2Q03169 654 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 MCMDC2Q4G0Z9 681 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 RRP12Q5JTH9 1297 aaKnown RBP13.04□□□□□ -0.32
TRAV3-201ENST00000390425 GNASQ5JWF2 1037 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 TAPT1Q6NXT6 567 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 FBXO16Q8IX29 292 aaPredicted RBP13.04□□□□□ -0.32
TRAV3-201ENST00000390425 FAM126BQ8IXS8 530 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 SMC5Q8IY18 1101 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 CDX2Q99626 313 aaPredicted RBP13.04□□□□□ -0.32
TRAV3-201ENST00000390425 SEMA6BQ9H3T3 888 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 PDGFCQ9NRA1 345 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 TCP11L1Q9NUJ3 509 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 MROH7Q68CQ1 1323 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 TANC1Q9C0D5 1861 aa13.04□□□□□ -0.32
TRAV3-201ENST00000390425 A0A0U1RQG5 324 aaPredicted RBP13.03□□□□□ -0.32
TRAV3-201ENST00000390425 ASB14A6NK59 587 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 NFIBO00712 420 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 PDHBP11177 359 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 TOP1P11387 765 aaKnown RBP13.03□□□□□ -0.32
TRAV3-201ENST00000390425 SYDE2Q5VT97 1194 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 CXCL17Q6UXB2 119 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 NSMFQ6X4W1 530 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 C16orf59Q7L2K0 433 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 TLK2Q86UE8 772 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 MORC4Q8TE76 937 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAV3-201ENST00000390425 SPC25Q9HBM1 224 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 TOMM22Q9NS69 142 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
TRAV3-201ENST00000390425 GRIN2DO15399 1336 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 NEDD4P46934 1319 aa13.03□□□□□ -0.32
TRAV3-201ENST00000390425 FRMPD2Q68DX3 1309 aaPredicted RBP13.03□□□□□ -0.32
TRAV3-201ENST00000390425 CD4P01730 458 aa13.02□□□□□ -0.33
TRAV3-201ENST00000390425 SNHG28P0DPA3 235 aa13.02□□□□□ -0.33
TRAV3-201ENST00000390425 FSCN1Q16658 493 aaKnown RBP13.02□□□□□ -0.33
TRAV3-201ENST00000390425 MFSD5Q6N075 450 aa13.02□□□□□ -0.33
TRAV3-201ENST00000390425 EEPD1Q7L9B9 569 aa13.02□□□□□ -0.33
TRAV3-201ENST00000390425 TICAM2Q86XR7 235 aa13.02□□□□□ -0.33
TRAV3-201ENST00000390425 SLC43A3Q8NBI5 491 aa13.02□□□□□ -0.33
TRAV3-201ENST00000390425 CLEC4DQ8WXI8 215 aa13.02□□□□□ -0.33
TRAV3-201ENST00000390425 MYLIPQ8WY64 445 aa13.02□□□□□ -0.33
TRAV3-201ENST00000390425 PPP1R12CQ9BZL4 782 aa13.02□□□□□ -0.33
TRAV3-201ENST00000390425 GPCPD1Q9NPB8 672 aa13.02□□□□□ -0.33
TRAV3-201ENST00000390425 CHD7Q9P2D1 2997 aa13.02□□□□□ -0.33
TRAV3-201ENST00000390425 TET1Q8NFU7 2136 aa13.01□□□□□ -0.33
TRAV3-201ENST00000390425 TRIM6-TRIM34B2RNG4 842 aa13.01□□□□□ -0.33
TRAV3-201ENST00000390425 ALDH5A1P51649 535 aaPredicted RBP13.01□□□□□ -0.33
TRAV3-201ENST00000390425 ZNF543Q08ER8 600 aa13.01□□□□□ -0.33
TRAV3-201ENST00000390425 BAATQ14032 418 aaPredicted RBP13.01□□□□□ -0.33
TRAV3-201ENST00000390425 TMEM240Q5SV17 173 aa13.01□□□□□ -0.33
TRAV3-201ENST00000390425 AKNAD1Q5T1N1 836 aa13.01□□□□□ -0.33
TRAV3-201ENST00000390425 RASIP1Q5U651 963 aa13.01□□□□□ -0.33
TRAV3-201ENST00000390425 B4GALNT3Q6L9W6 998 aa13.01□□□□□ -0.33
TRAV3-201ENST00000390425 SLC30A10Q6XR72 485 aa13.01□□□□□ -0.33
TRAV3-201ENST00000390425 PLEKHM2Q8IWE5 1019 aa13.01□□□□□ -0.33
TRAV3-201ENST00000390425 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRAV3-201ENST00000390425 VTA1Q9NP79 307 aa13.01□□□□□ -0.33
TRAV3-201ENST00000390425 UMODL1Q5DID0 1318 aa13.01□□□□□ -0.33
TRAV3-201ENST00000390425 TRIP12Q14669 1992 aaPredicted RBP13.01□□□□□ -0.33
TRAV3-201ENST00000390425 PTPRSQ13332 1948 aa13□□□□□ -0.33
TRAV3-201ENST00000390425 TMEM265A0A087WTH1 108 aa13□□□□□ -0.33
TRAV3-201ENST00000390425 DYNC1LI2O43237 492 aaPredicted RBP13□□□□□ -0.33
TRAV3-201ENST00000390425 IGHDP01880 384 aa13□□□□□ -0.33
TRAV3-201ENST00000390425 CSF2RAP15509 400 aa13□□□□□ -0.33
TRAV3-201ENST00000390425 SDSP20132 328 aa13□□□□□ -0.33
TRAV3-201ENST00000390425 DNAJB2P25686 324 aa13□□□□□ -0.33
TRAV3-201ENST00000390425 CYP2C18P33260 490 aa13□□□□□ -0.33
TRAV3-201ENST00000390425 NOL8Q76FK4 1167 aaKnown RBP13□□□□□ -0.33
TRAV3-201ENST00000390425 MAFAQ8NHW3 353 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms