RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 BCAS4Q8TDM0 211 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 PDS5AQ29RF7 1337 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 FAM205AQ6ZU69 1335 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 MYH8P13535 1937 aa19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 EBAG9O00559 213 aa19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 AARSP49588 968 aaKnown RBP eCLIP19.79■□□□□ 0.761e-7■□□□□ 8.5
SQSTM1-202ENST00000389805 SLC35G1Q2M3R5 365 aa19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 FILIP1LQ4L180 1135 aa19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 EP400NLQ6ZTU2 488 aa19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 CNGA4Q8IV77 575 aa19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 FNBP4Q8N3X1 1017 aaPredicted RBP19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 FAM76AQ8TAV0 307 aa19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 IRAK1P51617 712 aa19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 SPATA1Q5VX52 437 aa19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 SPTY2D1Q68D10 685 aaPredicted RBP19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 KANK3Q6NY19 840 aa19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 COG1Q8WTW3 980 aa19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 BTAF1O14981 1849 aa19.79■□□□□ 0.76
SQSTM1-202ENST00000389805 GOLGA6CA6NDK9 693 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 ATP1A1P05023 1023 aaKnown RBP19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 GOLGA6DP0CG33 693 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 GOLGA8HP0CJ92 632 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 PBX1P40424 430 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 TUBB4BP68371 445 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 FKBP15Q5T1M5 1219 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 CXorf56Q9H5V9 222 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 POLD4Q9HCU8 107 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 GOLGA6AQ9NYA3 693 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 STX8Q9UNK0 236 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 ZC3H4Q9UPT8 1303 aaKnown RBP19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 AGPSO00116 658 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 N4BP3O15049 544 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 GPSM2P81274 684 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 ATP2C1P98194 919 aaPredicted RBP19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 CT47A1Q5JQC4 288 aaPredicted RBP19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 FERMT2Q96AC1 680 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 ABHD10Q9NUJ1 306 aa19.78■□□□□ 0.76
SQSTM1-202ENST00000389805 CHRM1P11229 460 aaPredicted RBP19.77■□□□□ 0.76
SQSTM1-202ENST00000389805 KCNV1Q6PIU1 500 aa19.77■□□□□ 0.76
SQSTM1-202ENST00000389805 WDR66Q8TBY9 1149 aa19.77■□□□□ 0.76
SQSTM1-202ENST00000389805 TNRC6CQ9HCJ0 1690 aaKnown RBP19.77■□□□□ 0.76
SQSTM1-202ENST00000389805 RGL2O15211 777 aa19.77■□□□□ 0.76
SQSTM1-202ENST00000389805 KRT9P35527 623 aa19.77■□□□□ 0.76
SQSTM1-202ENST00000389805 SH3RF1Q7Z6J0 888 aa19.77■□□□□ 0.76
SQSTM1-202ENST00000389805 MTRQ99707 1265 aa19.77■□□□□ 0.76
SQSTM1-202ENST00000389805 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.77■□□□□ 0.75
SQSTM1-202ENST00000389805 TSPY3P0CV98 308 aa19.77■□□□□ 0.75
SQSTM1-202ENST00000389805 TSPY8P0CW00 308 aa19.77■□□□□ 0.75
SQSTM1-202ENST00000389805 ERCC5P28715 1186 aaPredicted RBP19.77■□□□□ 0.75
SQSTM1-202ENST00000389805 DPYDQ12882 1025 aa19.77■□□□□ 0.75
SQSTM1-202ENST00000389805 PRR5LQ6MZQ0 368 aa19.77■□□□□ 0.75
SQSTM1-202ENST00000389805 TMTC1Q8IUR5 882 aa19.77■□□□□ 0.75
SQSTM1-202ENST00000389805 SELENOOQ9BVL4 669 aa19.77■□□□□ 0.75
SQSTM1-202ENST00000389805 VIPAS39Q9H9C1 493 aa19.77■□□□□ 0.75
SQSTM1-202ENST00000389805 TAB2Q9NYJ8 693 aa19.77■□□□□ 0.75
SQSTM1-202ENST00000389805 ZNF185O15231 689 aa19.76■□□□□ 0.75
SQSTM1-202ENST00000389805 CYTH3O43739 400 aa19.76■□□□□ 0.75
SQSTM1-202ENST00000389805 MAP9Q49MG5 647 aa19.76■□□□□ 0.75
SQSTM1-202ENST00000389805 TRIML1Q8N9V2 468 aa19.76■□□□□ 0.75
SQSTM1-202ENST00000389805 CTNND2Q9UQB3 1225 aa19.76■□□□□ 0.75
SQSTM1-202ENST00000389805 TUBBP07437 444 aa19.76■□□□□ 0.75
SQSTM1-202ENST00000389805 KIF5BP33176 963 aa19.76■□□□□ 0.75
SQSTM1-202ENST00000389805 MAP2K2P36507 400 aa19.76■□□□□ 0.75
SQSTM1-202ENST00000389805 ANKRD20A12PQ8NF67 263 aa19.76■□□□□ 0.75
SQSTM1-202ENST00000389805 CAGE1Q8TC20 777 aa19.76■□□□□ 0.75
SQSTM1-202ENST00000389805 MAD2L2Q9UI95 211 aa19.76■□□□□ 0.75
SQSTM1-202ENST00000389805 LEMD3Q9Y2U8 911 aa19.76■□□□□ 0.75
SQSTM1-202ENST00000389805 XDHP47989 1333 aa19.75■□□□□ 0.75
SQSTM1-202ENST00000389805 GNGT1P63211 74 aa19.75■□□□□ 0.75
SQSTM1-202ENST00000389805 UFL1O94874 794 aa19.75■□□□□ 0.75
SQSTM1-202ENST00000389805 PSEN1P49768 467 aa19.75■□□□□ 0.75
SQSTM1-202ENST00000389805 SWT1Q5T5J6 900 aaKnown RBP19.75■□□□□ 0.75
SQSTM1-202ENST00000389805 CYP26C1Q6V0L0 522 aa19.75■□□□□ 0.75
SQSTM1-202ENST00000389805 TRAPPC11Q7Z392 1133 aa19.75■□□□□ 0.75
SQSTM1-202ENST00000389805 BLIDQ8IZY5 108 aa19.75■□□□□ 0.75
SQSTM1-202ENST00000389805 ZNF444Q8N0Y2 327 aaPredicted RBP19.75■□□□□ 0.75
SQSTM1-202ENST00000389805 CEP89Q96ST8 783 aa19.75■□□□□ 0.75
SQSTM1-202ENST00000389805 REXO2Q9Y3B8 237 aaKnown RBP19.75■□□□□ 0.75
SQSTM1-202ENST00000389805 GOLGA6BA6NDN3 693 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 PES1O00541 588 aaKnown RBP19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 IBSPP21815 317 aaPredicted RBP19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 INPP5BP32019 993 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 CUL4BQ13620 913 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 DGKHQ86XP1 1220 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 ZNF831Q5JPB2 1677 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 KRT31Q15323 416 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 RPGRQ92834 1020 aaKnown RBP19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 CAPS2Q9BXY5 557 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 MAPK8IP1Q9UQF2 711 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 SAR1BQ9Y6B6 198 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 PP2D1A8MPX8 630 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 PPP1R3GB7ZBB8 358 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 HEATR3Q7Z4Q2 680 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 ZNF804AQ7Z570 1209 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 PLIN2Q99541 437 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 TMEM47Q9BQJ4 181 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 CD209Q9NNX6 404 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 CAPN7Q9Y6W3 813 aa19.74■□□□□ 0.75
SQSTM1-202ENST00000389805 BAG3O95817 575 aa19.73■□□□□ 0.75
SQSTM1-202ENST00000389805 BMP15O95972 392 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms