RNA–Protein interactions for RNA: ENST00000386847.1

SNORA48-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48-201ENST00000386847 TOP1P11387 765 aaKnown RBP11.23□□□□□ -0.61
SNORA48-201ENST00000386847 DNAJB2P25686 324 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 NT5C2P49902 561 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 RRP1P56182 461 aaKnown RBP11.23□□□□□ -0.61
SNORA48-201ENST00000386847 AAMPQ13685 434 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 PWP2Q15269 919 aaKnown RBP11.23□□□□□ -0.61
SNORA48-201ENST00000386847 CCSAPQ6IQ19 270 aaPredicted RBP11.23□□□□□ -0.61
SNORA48-201ENST00000386847 MFSD6Q6ZSS7 791 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 KIAA1211Q6ZU35 1233 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 MYLIPQ8WY64 445 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 SYMPKQ92797 1274 aaKnown RBP11.23□□□□□ -0.61
SNORA48-201ENST00000386847 TIFAQ96CG3 184 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 GAS2L1Q99501 681 aaPredicted RBP11.23□□□□□ -0.61
SNORA48-201ENST00000386847 PPP1R12CQ9BZL4 782 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 VTA1Q9NP79 307 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 CYP39A1Q9NYL5 469 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 MSRAQ9UJ68 235 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 ANAPC4Q9UJX5 808 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 TBX21Q9UL17 535 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 MYADML2A6NDP7 307 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 SUPT20HL2P0C7V6 817 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 ITGB8P26012 769 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 CPT1AP50416 773 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 CDK7P50613 346 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 BEX3Q00994 111 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 ALX1Q15699 326 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 RAB30Q15771 203 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 CXCL17Q6UXB2 119 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 EEPD1Q7L9B9 569 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 FAM126BQ8IXS8 530 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 RPUSD2Q8IZ73 545 aaKnown RBP11.22□□□□□ -0.61
SNORA48-201ENST00000386847 OTUD7AQ8TE49 926 aaPredicted RBP11.22□□□□□ -0.61
SNORA48-201ENST00000386847 RILPL2Q969X0 211 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 TTC14Q96N46 770 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 HIPK3Q9H422 1215 aa11.22□□□□□ -0.61
SNORA48-201ENST00000386847 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.22□□□□□ -0.61
SNORA48-201ENST00000386847 ZNF536O15090 1300 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 NMT2O60551 498 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 CSF2RAP15509 400 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 PDE1AP54750 535 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 EPHB4P54760 987 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 PDE4DQ08499 809 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 HDAC1Q13547 482 aaPredicted RBP11.21□□□□□ -0.61
SNORA48-201ENST00000386847 CCDC178Q5BJE1 867 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 SYDE2Q5VT97 1194 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 IQCA1Q86XH1 822 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 FBXO16Q8IX29 292 aaPredicted RBP11.21□□□□□ -0.61
SNORA48-201ENST00000386847 ESR2Q92731 530 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.21□□□□□ -0.61
SNORA48-201ENST00000386847 RANBP17Q9H2T7 1088 aaKnown RBP11.21□□□□□ -0.61
SNORA48-201ENST00000386847 TTYH1Q9H313 450 aaPredicted RBP11.21□□□□□ -0.61
SNORA48-201ENST00000386847 RWDD1Q9H446 243 aaPredicted RBP11.21□□□□□ -0.61
SNORA48-201ENST00000386847 ZNF576Q9H609 170 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 IL17RBQ9NRM6 502 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 POLR3EQ9NVU0 708 aa11.21□□□□□ -0.61
SNORA48-201ENST00000386847 GNEQ9Y223 722 aaKnown RBP11.21□□□□□ -0.61
SNORA48-201ENST00000386847 SMCHD1A6NHR9 2005 aa11.21□□□□□ -0.62
SNORA48-201ENST00000386847 FRMPD2Q68DX3 1309 aaPredicted RBP11.2□□□□□ -0.62
SNORA48-201ENST00000386847 SOWAHBA6NEL2 793 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 HIP1O00291 1037 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 ZNF213O14771 459 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 FGAP02671 866 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 FGBP02675 491 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 SMPD1P17405 629 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 CALML3P27482 149 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 SLC16A2P36021 539 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 SNAP25P60880 206 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 NKX3-2P78367 333 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 BAATQ14032 418 aaPredicted RBP11.2□□□□□ -0.62
SNORA48-201ENST00000386847 MUM1L1Q5H9M0 696 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 GPATCH4Q5T3I0 446 aaKnown RBP11.2□□□□□ -0.62
SNORA48-201ENST00000386847 VPS53Q5VIR6 699 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 RNF207Q6ZRF8 634 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 IL27Q8NEV9 243 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 FGD4Q96M96 766 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 TMEM47Q9BQJ4 181 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 COL25A1Q9BXS0 654 aaPredicted RBP11.2□□□□□ -0.62
SNORA48-201ENST00000386847 SLC28A3Q9HAS3 691 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 GPCPD1Q9NPB8 672 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 IL23AQ9NPF7 189 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 TCP11L1Q9NUJ3 509 aa11.2□□□□□ -0.62
SNORA48-201ENST00000386847 LAMA2P24043 3122 aaKnown RBP11.19□□□□□ -0.62
SNORA48-201ENST00000386847 ZMYM6O95789 1325 aa11.19□□□□□ -0.62
SNORA48-201ENST00000386847 CCDC171Q6TFL3 1326 aa11.19□□□□□ -0.62
SNORA48-201ENST00000386847 A0A0C4DFX4 3053 aa11.19□□□□□ -0.62
SNORA48-201ENST00000386847 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.19□□□□□ -0.62
SNORA48-201ENST00000386847 NKRFO15226 690 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNORA48-201ENST00000386847 ADCY6O43306 1168 aa11.19□□□□□ -0.62
SNORA48-201ENST00000386847 KPNA6O60684 536 aa11.19□□□□□ -0.62
SNORA48-201ENST00000386847 ACRP10323 421 aa11.19□□□□□ -0.62
SNORA48-201ENST00000386847 HSPD1P10809 573 aaKnown RBP11.19□□□□□ -0.62
SNORA48-201ENST00000386847 ACTN1P12814 892 aa11.19□□□□□ -0.62
SNORA48-201ENST00000386847 CYP2C18P33260 490 aa11.19□□□□□ -0.62
SNORA48-201ENST00000386847 ALDH5A1P51649 535 aaPredicted RBP11.19□□□□□ -0.62
SNORA48-201ENST00000386847 PPP2R5BQ15173 497 aa11.19□□□□□ -0.62
SNORA48-201ENST00000386847 DUSP28Q4G0W2 176 aa11.19□□□□□ -0.62
SNORA48-201ENST00000386847 TMEM240Q5SV17 173 aa11.19□□□□□ -0.62
SNORA48-201ENST00000386847 AKNAD1Q5T1N1 836 aa11.19□□□□□ -0.62
SNORA48-201ENST00000386847 BTNL9Q6UXG8 535 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms