RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 NSMFQ6X4W1 530 aa31.15■■■□□ 2.58
NPHP3-202ENST00000383282 SEMA6BQ9H3T3 888 aa31.15■■■□□ 2.58
NPHP3-202ENST00000383282 CYP39A1Q9NYL5 469 aa31.15■■■□□ 2.58
NPHP3-202ENST00000383282 TBX21Q9UL17 535 aa31.15■■■□□ 2.58
NPHP3-202ENST00000383282 C11orf97A0A1B0GVM6 126 aaPredicted RBP31.14■■■□□ 2.58
NPHP3-202ENST00000383282 HSPD1P10809 573 aaKnown RBP31.14■■■□□ 2.58
NPHP3-202ENST00000383282 CDK7P50613 346 aa31.14■■■□□ 2.58
NPHP3-202ENST00000383282 NKX3-2P78367 333 aa31.14■■■□□ 2.58
NPHP3-202ENST00000383282 AAMPQ13685 434 aa31.14■■■□□ 2.58
NPHP3-202ENST00000383282 LNPKQ9C0E8 428 aa31.14■■■□□ 2.58
NPHP3-202ENST00000383282 RANBP17Q9H2T7 1088 aaKnown RBP31.14■■■□□ 2.58
NPHP3-202ENST00000383282 TCP11L1Q9NUJ3 509 aa31.14■■■□□ 2.58
NPHP3-202ENST00000383282 ZMYM6O95789 1325 aa31.14■■■□□ 2.58
NPHP3-202ENST00000383282 MCM3APO60318 1980 aa31.14■■■□□ 2.57
NPHP3-202ENST00000383282 TLK2Q86UE8 772 aa31.13■■■□□ 2.57
NPHP3-202ENST00000383282 RILPL2Q969X0 211 aa31.13■■■□□ 2.57
NPHP3-202ENST00000383282 CDX2Q99626 313 aaPredicted RBP31.13■■■□□ 2.57
NPHP3-202ENST00000383282 AP5M1Q9H0R1 490 aa31.13■■■□□ 2.57
NPHP3-202ENST00000383282 ZEB2O60315 1214 aa31.12■■■□□ 2.57
NPHP3-202ENST00000383282 CABYRO75952 493 aa31.12■■■□□ 2.57
NPHP3-202ENST00000383282 PCP11498 1178 aaKnown RBP31.12■■■□□ 2.57
NPHP3-202ENST00000383282 BEX3Q00994 111 aa31.12■■■□□ 2.57
NPHP3-202ENST00000383282 NMIQ13287 307 aaPredicted RBP31.12■■■□□ 2.57
NPHP3-202ENST00000383282 SYDE2Q5VT97 1194 aa31.12■■■□□ 2.57
NPHP3-202ENST00000383282 MFSD5Q6N075 450 aa31.12■■■□□ 2.57
NPHP3-202ENST00000383282 BTNL9Q6UXG8 535 aa31.12■■■□□ 2.57
NPHP3-202ENST00000383282 TMEM47Q9BQJ4 181 aa31.12■■■□□ 2.57
NPHP3-202ENST00000383282 GNEQ9Y223 722 aaKnown RBP31.12■■■□□ 2.57
NPHP3-202ENST00000383282 CCDC171Q6TFL3 1326 aa31.12■■■□□ 2.57
NPHP3-202ENST00000383282 TMEM265A0A087WTH1 108 aa31.11■■■□□ 2.57
NPHP3-202ENST00000383282 CTAGE5O15320 804 aa31.11■■■□□ 2.57
NPHP3-202ENST00000383282 SLC16A2P36021 539 aa31.11■■■□□ 2.57
NPHP3-202ENST00000383282 MFAP1P55081 439 aaKnown RBP31.11■■■□□ 2.57
NPHP3-202ENST00000383282 PPIGQ13427 754 aaKnown RBP eCLIP31.11■■■□□ 2.578e-7■■■□□ 14.9
NPHP3-202ENST00000383282 TTBK2Q6IQ55 1244 aa31.11■■■□□ 2.57
NPHP3-202ENST00000383282 ZNF589Q86UQ0 364 aaPredicted RBP31.11■■■□□ 2.57
NPHP3-202ENST00000383282 FRMPD2Q68DX3 1309 aaPredicted RBP31.1■■■□□ 2.57
NPHP3-202ENST00000383282 HAND2P61296 217 aa31.1■■■□□ 2.57
NPHP3-202ENST00000383282 FSCN1Q16658 493 aaKnown RBP31.1■■■□□ 2.57
NPHP3-202ENST00000383282 IQSEC1Q6DN90 963 aa31.1■■■□□ 2.57
NPHP3-202ENST00000383282 MFSD6Q6ZSS7 791 aa31.1■■■□□ 2.57
NPHP3-202ENST00000383282 EEPD1Q7L9B9 569 aa31.1■■■□□ 2.57
NPHP3-202ENST00000383282 FAM126BQ8IXS8 530 aa31.1■■■□□ 2.57
NPHP3-202ENST00000383282 TMEM199Q8N511 208 aa31.1■■■□□ 2.57
NPHP3-202ENST00000383282 RWDD1Q9H446 243 aaPredicted RBP31.1■■■□□ 2.57
NPHP3-202ENST00000383282 VTA1Q9NP79 307 aa31.1■■■□□ 2.57
NPHP3-202ENST00000383282 ADD3Q9UEY8 706 aaKnown RBP31.1■■■□□ 2.57
NPHP3-202ENST00000383282 PNMA2Q9UL42 364 aa31.1■■■□□ 2.57
NPHP3-202ENST00000383282 ASTN1O14525 1302 aa31.09■■■□□ 2.57
NPHP3-202ENST00000383282 HSFX4A0A1B0GTS1 333 aaPredicted RBP31.09■■■□□ 2.57
NPHP3-202ENST00000383282 HSFX3A0A1B0GWH4 333 aaPredicted RBP31.09■■■□□ 2.57
NPHP3-202ENST00000383282 DYNC1LI2O43237 492 aaPredicted RBP31.09■■■□□ 2.57
NPHP3-202ENST00000383282 AKNAD1Q5T1N1 836 aa31.09■■■□□ 2.57
NPHP3-202ENST00000383282 PHF6Q8IWS0 365 aaKnown RBP eCLIP31.09■■■□□ 2.57
NPHP3-202ENST00000383282 FBXO16Q8IX29 292 aaPredicted RBP31.09■■■□□ 2.57
NPHP3-202ENST00000383282 RNF41Q9H4P4 317 aaPredicted RBP31.09■■■□□ 2.57
NPHP3-202ENST00000383282 GPCPD1Q9NPB8 672 aa31.09■■■□□ 2.57
NPHP3-202ENST00000383282 A0A0C4DFX4 3053 aa31.09■■■□□ 2.57
NPHP3-202ENST00000383282 SMPD1P17405 629 aa31.08■■■□□ 2.57
NPHP3-202ENST00000383282 CXCL17Q6UXB2 119 aa31.08■■■□□ 2.57
NPHP3-202ENST00000383282 TTC14Q96N46 770 aa31.08■■■□□ 2.57
NPHP3-202ENST00000383282 TTYH1Q9H313 450 aaPredicted RBP31.08■■■□□ 2.57
NPHP3-202ENST00000383282 Q9Y3F1 56 aa31.08■■■□□ 2.57
NPHP3-202ENST00000383282 PDHBP11177 359 aa31.07■■■□□ 2.56
NPHP3-202ENST00000383282 BAATQ14032 418 aaPredicted RBP31.07■■■□□ 2.56
NPHP3-202ENST00000383282 B4GALNT3Q6L9W6 998 aa31.07■■■□□ 2.56
NPHP3-202ENST00000383282 TAPT1Q6NXT6 567 aa31.07■■■□□ 2.56
NPHP3-202ENST00000383282 KIAA1211Q6ZU35 1233 aa31.07■■■□□ 2.56
NPHP3-202ENST00000383282 SEZ6LQ9BYH1 1024 aa31.07■■■□□ 2.56
NPHP3-202ENST00000383282 PPP1R12CQ9BZL4 782 aa31.07■■■□□ 2.56
NPHP3-202ENST00000383282 PDGFCQ9NRA1 345 aa31.07■■■□□ 2.56
NPHP3-202ENST00000383282 PTPDC1A2A3K4 754 aa31.06■■■□□ 2.56
NPHP3-202ENST00000383282 SMC5Q8IY18 1101 aa31.06■■■□□ 2.56
NPHP3-202ENST00000383282 MORC4Q8TE76 937 aa31.06■■■□□ 2.56
NPHP3-202ENST00000383282 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.06■■■□□ 2.56
NPHP3-202ENST00000383282 DDX49Q9Y6V7 483 aaKnown RBP31.06■■■□□ 2.56
NPHP3-202ENST00000383282 LOC102724159A0A0B4J2E5 919 aa31.05■■■□□ 2.56
NPHP3-202ENST00000383282 ALDH5A1P51649 535 aaPredicted RBP31.05■■■□□ 2.56
NPHP3-202ENST00000383282 ITGA7Q13683 1181 aa31.05■■■□□ 2.56
NPHP3-202ENST00000383282 PWP2Q15269 919 aaKnown RBP31.05■■■□□ 2.56
NPHP3-202ENST00000383282 MYLIPQ8WY64 445 aa31.05■■■□□ 2.56
NPHP3-202ENST00000383282 ESR2Q92731 530 aa31.05■■■□□ 2.56
NPHP3-202ENST00000383282 PURBQ96QR8 312 aaKnown RBP31.05■■■□□ 2.56
NPHP3-202ENST00000383282 NFIBO00712 420 aa31.04■■■□□ 2.56
NPHP3-202ENST00000383282 CSF2RAP15509 400 aa31.04■■■□□ 2.56
NPHP3-202ENST00000383282 SDSP20132 328 aa31.04■■■□□ 2.56
NPHP3-202ENST00000383282 SLC43A3Q8NBI5 491 aa31.04■■■□□ 2.56
NPHP3-202ENST00000383282 MAFAQ8NHW3 353 aaPredicted RBP31.04■■■□□ 2.56
NPHP3-202ENST00000383282 CD4P01730 458 aa31.03■■■□□ 2.56
NPHP3-202ENST00000383282 DNAJB2P25686 324 aa31.03■■■□□ 2.56
NPHP3-202ENST00000383282 ZNF543Q08ER8 600 aa31.03■■■□□ 2.56
NPHP3-202ENST00000383282 PSRC1Q6PGN9 363 aaPredicted RBP31.03■■■□□ 2.56
NPHP3-202ENST00000383282 CHD1LQ86WJ1 897 aa31.03■■■□□ 2.56
NPHP3-202ENST00000383282 TBC1D10CQ8IV04 446 aa31.03■■■□□ 2.56
NPHP3-202ENST00000383282 MPHOSPH6Q99547 160 aaKnown RBP31.03■■■□□ 2.56
NPHP3-202ENST00000383282 ZNF213O14771 459 aa31.02■■■□□ 2.56
NPHP3-202ENST00000383282 FOSL2P15408 326 aa31.02■■■□□ 2.56
NPHP3-202ENST00000383282 NT5C2P49902 561 aa31.02■■■□□ 2.56
NPHP3-202ENST00000383282 TMEM240Q5SV17 173 aa31.02■■■□□ 2.56
NPHP3-202ENST00000383282 LRRC37A2A6NM11 1700 aa31.01■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms