RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 TTLL13PA6NNM8 815 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 STMND1H3BQB6 276 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 ADAMTS2O95450 1211 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 IDEP14735 1019 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 TATP17735 454 aaPredicted RBP6.28□□□□□ -1.4
RFC1-202ENST00000381897 MX2P20592 715 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 EPS15P42566 896 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 MMP14P50281 582 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 MAP2K1Q02750 393 aaPredicted RBP6.28□□□□□ -1.4
RFC1-202ENST00000381897 SLC35F6Q8N357 371 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 ENOX1Q8TC92 643 aaKnown RBP6.28□□□□□ -1.4
RFC1-202ENST00000381897 EFHD2Q96C19 240 aaPredicted RBP6.28□□□□□ -1.4
RFC1-202ENST00000381897 NUP58Q9BVL2 599 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 GOLPH3LQ9H4A5 285 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 PFDN4Q9NQP4 134 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 FAM184BQ9ULE4 1060 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 SALL3Q9BXA9 1300 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 BTBD11A6QL63 1104 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 GOLGA8AA7E2F4 631 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 MAP2K7O14733 419 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 ZNF213O14771 459 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 TMOD1P28289 359 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 HNRNPH1P31943 449 aaKnown RBP6.28□□□□□ -1.4
RFC1-202ENST00000381897 TMPRSS15P98073 1019 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 SCRN1Q12765 414 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 C8orf74Q6P047 294 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 TRIM50Q86XT4 487 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 ACSBG1Q96GR2 724 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 IFT74Q96LB3 600 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 LRRC2Q9BYS8 371 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 ZCWPW1Q9H0M4 648 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 ZWILCHQ9H900 591 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 BATF3Q9NR55 127 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 SEPT10Q9P0V9 454 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 TLR3O15455 904 aaKnown RBP6.28□□□□□ -1.4
RFC1-202ENST00000381897 DTNBO60941 627 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 TNNC1P63316 161 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 SH3D19Q5HYK7 790 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 BEND6Q5SZJ8 279 aaPredicted RBP6.28□□□□□ -1.4
RFC1-202ENST00000381897 SLFN12Q8IYM2 578 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 GDAP1L1Q96MZ0 367 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 SH3GL3Q99963 347 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 CHRAC1Q9NRG0 131 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 GTF2A1LQ9UNN4 478 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 MAP3K2Q9Y2U5 619 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 ZC3H13Q5T200 1668 aaKnown RBP6.28□□□□□ -1.4
RFC1-202ENST00000381897 ABCC3O15438 1527 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 INO80Q9ULG1 1556 aaPredicted RBP6.28□□□□□ -1.4
RFC1-202ENST00000381897 CRYMQ14894 314 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 MTHFSDQ2M296 383 aaKnown RBP6.28□□□□□ -1.4
RFC1-202ENST00000381897 CCDC96Q2M329 555 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 CCDC57Q2TAC2 916 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 REXO1L1PQ8IX06 675 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 LRRC45Q96CN5 670 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 TUBB1Q9H4B7 451 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 PRDM11Q9NQV5 511 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 STK32BQ9NY57 414 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 RAB21Q9UL25 225 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 FLT4P35916 1363 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 CARMIL3Q8ND23 1372 aa6.28□□□□□ -1.4
RFC1-202ENST00000381897 GRM8O00222 908 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 LACTBP83111 547 aaPredicted RBP6.27□□□□□ -1.41
RFC1-202ENST00000381897 UBXN1Q04323 297 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 MAP3K12Q12852 859 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 TCIRG1Q13488 830 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 TOB2Q14106 344 aaPredicted RBP6.27□□□□□ -1.41
RFC1-202ENST00000381897 SLC39A14Q15043 492 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 IFI16Q16666 785 aaKnown RBP6.27□□□□□ -1.41
RFC1-202ENST00000381897 EMBQ6PCB8 327 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 CROCCP2Q86T23 111 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 LMNTD2Q8IXW0 634 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 COG1Q8WTW3 980 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 SELENOSQ9BQE4 189 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 CNNM1Q9NRU3 951 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 SAMD15Q9P1V8 674 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 MAPK8IP1Q9UQF2 711 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 SPDYE16A6NNV3 312 aaPredicted RBP6.27□□□□□ -1.41
RFC1-202ENST00000381897 NBNO60934 754 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 FOSL1P15407 271 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 KIF11P52732 1056 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 PNOCQ13519 176 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 HLTFQ14527 1009 aaKnown RBP eCLIP6.27□□□□□ -1.411e-6■■■□□ 14.6
RFC1-202ENST00000381897 GPR162Q16538 588 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 CCDC40Q4G0X9 1142 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 SPATA1Q5VX52 437 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 WDR93Q6P2C0 686 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 PGM2L1Q6PCE3 622 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 PPP1R21Q6ZMI0 780 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 CEP128Q6ZU80 1094 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 TOGARAM2Q6ZUX3 1019 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 DNAJB7Q7Z6W7 309 aaPredicted RBP6.27□□□□□ -1.41
RFC1-202ENST00000381897 C11orf74Q86VG3 221 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 GATAD2AQ86YP4 633 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 CACNA2D3Q8IZS8 1091 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 CCDC155Q8N6L0 562 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.27□□□□□ -1.413e-6■■■■■ 50.8
RFC1-202ENST00000381897 RNF25Q96BH1 459 aaPredicted RBP6.27□□□□□ -1.41
RFC1-202ENST00000381897 VMP1Q96GC9 406 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 NIF3L1Q9GZT8 377 aa6.27□□□□□ -1.41
RFC1-202ENST00000381897 LCMT1Q9UIC8 334 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms