RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 FANCBQ8NB91 859 aa15.46■□□□□ 0.07
SDC1-202ENST00000381150 LRRC1Q9BTT6 524 aa15.46■□□□□ 0.07
SDC1-202ENST00000381150 TUBB2BQ9BVA1 445 aa15.46■□□□□ 0.07
SDC1-202ENST00000381150 RNF41Q9H4P4 317 aaPredicted RBP15.46■□□□□ 0.07
SDC1-202ENST00000381150 SRP68Q9UHB9 627 aaKnown RBP15.46■□□□□ 0.07
SDC1-202ENST00000381150 DMGDHQ9UI17 866 aaKnown RBP15.46■□□□□ 0.07
SDC1-202ENST00000381150 PDE2AO00408 941 aaPredicted RBP15.46■□□□□ 0.06
SDC1-202ENST00000381150 HSF2BPO75031 334 aa15.46■□□□□ 0.06
SDC1-202ENST00000381150 CCDC172P0C7W6 258 aa15.46■□□□□ 0.06
SDC1-202ENST00000381150 TM4SF1P30408 202 aa15.46■□□□□ 0.06
SDC1-202ENST00000381150 IFT88Q13099 833 aa15.46■□□□□ 0.06
SDC1-202ENST00000381150 KRT26Q7Z3Y9 468 aa15.46■□□□□ 0.06
SDC1-202ENST00000381150 SHISA4Q96DD7 197 aa15.46■□□□□ 0.06
SDC1-202ENST00000381150 LACRTQ9GZZ8 138 aa15.46■□□□□ 0.06
SDC1-202ENST00000381150 PPANQ9NQ55 473 aaKnown RBP15.46■□□□□ 0.06
SDC1-202ENST00000381150 CEP131Q9UPN4 1083 aa15.46■□□□□ 0.06
SDC1-202ENST00000381150 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.46■□□□□ 0.06
SDC1-202ENST00000381150 DUOX1Q9NRD9 1551 aa15.46■□□□□ 0.06
SDC1-202ENST00000381150 FAM170AA1A519 330 aa15.45■□□□□ 0.06
SDC1-202ENST00000381150 SEC24CP53992 1094 aa15.45■□□□□ 0.06
SDC1-202ENST00000381150 APBA1Q02410 837 aa15.45■□□□□ 0.06
SDC1-202ENST00000381150 E2F5Q15329 346 aa15.45■□□□□ 0.06
SDC1-202ENST00000381150 OR8K1Q8NGG5 319 aa15.45■□□□□ 0.06
SDC1-202ENST00000381150 RPS8P62241 208 aaKnown RBP15.45■□□□□ 0.06
SDC1-202ENST00000381150 TUBB4BP68371 445 aa15.45■□□□□ 0.06
SDC1-202ENST00000381150 CKAP4Q07065 602 aaKnown RBP15.45■□□□□ 0.06
SDC1-202ENST00000381150 CAVIN4Q5BKX8 364 aa15.45■□□□□ 0.06
SDC1-202ENST00000381150 WDR93Q6P2C0 686 aa15.45■□□□□ 0.06
SDC1-202ENST00000381150 ZNF654Q8IZM8 581 aa15.45■□□□□ 0.06
SDC1-202ENST00000381150 BRIP1Q9BX63 1249 aa15.45■□□□□ 0.06
SDC1-202ENST00000381150 DLEC1Q9Y238 1755 aa15.45■□□□□ 0.06
SDC1-202ENST00000381150 IRS2Q9Y4H2 1338 aa15.45■□□□□ 0.06
SDC1-202ENST00000381150 KCNV1Q6PIU1 500 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 CCNI2Q6ZMN8 369 aaPredicted RBP15.44■□□□□ 0.06
SDC1-202ENST00000381150 MAATS1Q7Z4T9 603 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 NSUN4Q96CB9 384 aaKnown RBP15.44■□□□□ 0.06
SDC1-202ENST00000381150 TRIM47Q96LD4 638 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 MAGEC2Q9UBF1 373 aaPredicted RBP15.44■□□□□ 0.06
SDC1-202ENST00000381150 AGPSO00116 658 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 MCM7P33993 719 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 FUT2Q10981 343 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 PAK1Q13153 545 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 PTPROQ16827 1216 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 WASF1Q92558 559 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 MYH6P13533 1939 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 MYH13Q9UKX3 1938 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 CYP2D7A0A087X1C5 515 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 SCP2P22307 547 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 KIF5AQ12840 1032 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 CUL4BQ13620 913 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 POTEDQ86YR6 584 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 TRIML1Q8N9V2 468 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 CEP83Q9Y592 693 aa15.44■□□□□ 0.06
SDC1-202ENST00000381150 PDS5AQ29RF7 1337 aaKnown RBP15.43■□□□□ 0.06
SDC1-202ENST00000381150 EIF3HO15372 352 aaKnown RBP eCLIP15.43■□□□□ 0.061e-11■■■□□ 17.8
SDC1-202ENST00000381150 SARSP49591 514 aaKnown RBP15.43■□□□□ 0.06
SDC1-202ENST00000381150 KLK7P49862 253 aa15.43■□□□□ 0.06
SDC1-202ENST00000381150 TRAPPC11Q7Z392 1133 aa15.43■□□□□ 0.06
SDC1-202ENST00000381150 FNBP4Q8N3X1 1017 aaPredicted RBP15.43■□□□□ 0.06
SDC1-202ENST00000381150 ENAHQ8N8S7 591 aaPredicted RBP15.43■□□□□ 0.06
SDC1-202ENST00000381150 CABS1Q96KC9 395 aa15.43■□□□□ 0.06
SDC1-202ENST00000381150 HAUS4Q9H6D7 363 aa15.43■□□□□ 0.06
SDC1-202ENST00000381150 AGPAT5Q9NUQ2 364 aa15.43■□□□□ 0.06
SDC1-202ENST00000381150 REXO2Q9Y3B8 237 aaKnown RBP15.43■□□□□ 0.06
SDC1-202ENST00000381150 TNKSO95271 1327 aa15.43■□□□□ 0.06
SDC1-202ENST00000381150 SEMA3EO15041 775 aa15.43■□□□□ 0.06
SDC1-202ENST00000381150 RPSAP08865 295 aaKnown RBP15.43■□□□□ 0.06
SDC1-202ENST00000381150 NF2P35240 595 aa15.43■□□□□ 0.06
SDC1-202ENST00000381150 AMPD2Q01433 879 aa15.43■□□□□ 0.06
SDC1-202ENST00000381150 EVX2Q03828 476 aa15.43■□□□□ 0.06
SDC1-202ENST00000381150 ODF2Q5BJF6 829 aa15.43■□□□□ 0.06
SDC1-202ENST00000381150 APTXQ7Z2E3 356 aaKnown RBP15.43■□□□□ 0.06
SDC1-202ENST00000381150 FOXP1Q9H334 677 aaPredicted RBP15.43■□□□□ 0.06
SDC1-202ENST00000381150 SRPRBQ9Y5M8 271 aaKnown RBP15.43■□□□□ 0.06
SDC1-202ENST00000381150 TAF1LQ8IZX4 1826 aa15.43■□□□□ 0.06
SDC1-202ENST00000381150 GOLGB1Q14789 3259 aaKnown RBP15.42■□□□□ 0.06
SDC1-202ENST00000381150 B4DLN1 442 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 DEXIO95424 95 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 SPA17Q15506 151 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 SUGP1Q8IWZ8 645 aaKnown RBP15.42■□□□□ 0.06
SDC1-202ENST00000381150 ESR2Q92731 530 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 CEP89Q96ST8 783 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 SLC24A3Q9HC58 644 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 E7EVH7 732 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 NCK2O43639 380 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 TOM1O60784 492 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 SLC4A8Q2Y0W8 1093 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 N4BP2L2Q92802 583 aaPredicted RBP15.42■□□□□ 0.06
SDC1-202ENST00000381150 CCDC51Q96ER9 411 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 CCDC114Q96M63 670 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 C8orf37Q96NL8 207 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 NLRP3Q96P20 1036 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 SETDB2Q96T68 719 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 NYXQ9GZU5 481 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 LRWD1Q9UFC0 647 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 NHSQ6T4R5 1651 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 RCCD1A6NED2 376 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 PPP1R3GB7ZBB8 358 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 OPA1O60313 960 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 MECOMQ03112 1051 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms