RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 NUP62CLQ9H1M0 184 aa22.39■■□□□ 1.18
CCM2-202ENST00000381112 CLSTN2Q9H4D0 955 aa22.39■■□□□ 1.18
CCM2-202ENST00000381112 GRIN1Q05586 938 aa22.39■■□□□ 1.17
CCM2-202ENST00000381112 C4orf32Q8N8J7 132 aa22.39■■□□□ 1.17
CCM2-202ENST00000381112 TBCKQ8TEA7 893 aa22.39■■□□□ 1.17
CCM2-202ENST00000381112 RPAP3Q9H6T3 665 aaPredicted RBP22.39■■□□□ 1.17
CCM2-202ENST00000381112 CSADQ9Y600 493 aa22.39■■□□□ 1.17
CCM2-202ENST00000381112 PFKFB1P16118 471 aa22.38■■□□□ 1.17
CCM2-202ENST00000381112 TAL1P17542 331 aaPredicted RBP22.38■■□□□ 1.17
CCM2-202ENST00000381112 CCDC174Q6PII3 467 aa22.38■■□□□ 1.17
CCM2-202ENST00000381112 NEK8Q86SG6 692 aa22.38■■□□□ 1.17
CCM2-202ENST00000381112 GAS2L3Q86XJ1 694 aa22.38■■□□□ 1.17
CCM2-202ENST00000381112 FERMT2Q96AC1 680 aa22.38■■□□□ 1.17
CCM2-202ENST00000381112 TANGO6Q9C0B7 1094 aa22.38■■□□□ 1.17
CCM2-202ENST00000381112 HPSEQ9Y251 543 aa22.38■■□□□ 1.17
CCM2-202ENST00000381112 FSD2A1L4K1 749 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 MEIS2O14770 477 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 OPLAHO14841 1288 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 HMGCS2P54868 508 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 MAP3K11Q16584 847 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 PAPPA2Q9BXP8 1791 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 USP17L15C9J2P7 530 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 USP17L13C9JLJ4 530 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 USP17L11C9JVI0 530 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 USP17L18D6R9N7 530 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 USP17L22D6RA61 530 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 USP17L17D6RBQ6 530 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 USP17L19D6RCP7 530 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 USP17L20D6RJB6 530 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 POTEIP0CG38 1075 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 POTEJP0CG39 1038 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 USP17L24Q0WX57 530 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 USP17L6PQ6QN14 398 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 PPP1R9AQ9ULJ8 1098 aa22.37■■□□□ 1.17
CCM2-202ENST00000381112 FLOT1O75955 427 aa22.36■■□□□ 1.17
CCM2-202ENST00000381112 CAMK4Q16566 473 aa22.36■■□□□ 1.17
CCM2-202ENST00000381112 LETM2Q2VYF4 491 aa22.36■■□□□ 1.17
CCM2-202ENST00000381112 SAMD1Q6SPF0 538 aaPredicted RBP22.36■■□□□ 1.17
CCM2-202ENST00000381112 LRSAM1Q6UWE0 723 aa22.36■■□□□ 1.17
CCM2-202ENST00000381112 TEX2Q8IWB9 1127 aa22.36■■□□□ 1.17
CCM2-202ENST00000381112 RBM46Q8TBY0 533 aaKnown RBP22.36■■□□□ 1.17
CCM2-202ENST00000381112 CLEC11AQ9Y240 323 aa22.36■■□□□ 1.17
CCM2-202ENST00000381112 EDIL3O43854 480 aa22.35■■□□□ 1.17
CCM2-202ENST00000381112 KINO60870 393 aaKnown RBP22.35■■□□□ 1.17
CCM2-202ENST00000381112 SH3D19Q5HYK7 790 aa22.35■■□□□ 1.17
CCM2-202ENST00000381112 ARL6IP4Q66PJ3 421 aaKnown RBP22.35■■□□□ 1.17
CCM2-202ENST00000381112 MOB2Q70IA6 237 aa22.35■■□□□ 1.17
CCM2-202ENST00000381112 ANKRD13AQ8IZ07 590 aa22.35■■□□□ 1.17
CCM2-202ENST00000381112 CSRNP2Q9H175 543 aa22.35■■□□□ 1.17
CCM2-202ENST00000381112 TNMDQ9H2S6 317 aa22.35■■□□□ 1.17
CCM2-202ENST00000381112 PHIPQ8WWQ0 1821 aa22.35■■□□□ 1.17
CCM2-202ENST00000381112 ZNF536O15090 1300 aa22.35■■□□□ 1.17
CCM2-202ENST00000381112 ICAM1P05362 532 aa22.34■■□□□ 1.17
CCM2-202ENST00000381112 ORC2Q13416 577 aaPredicted RBP22.34■■□□□ 1.17
CCM2-202ENST00000381112 MCTP2Q6DN12 878 aa22.34■■□□□ 1.17
CCM2-202ENST00000381112 LDHDQ86WU2 507 aa22.34■■□□□ 1.17
CCM2-202ENST00000381112 SLC38A10Q9HBR0 1119 aa22.34■■□□□ 1.17
CCM2-202ENST00000381112 PIK3CDO00329 1044 aa22.34■■□□□ 1.17
CCM2-202ENST00000381112 CCNT1O60563 726 aaKnown RBP22.34■■□□□ 1.17
CCM2-202ENST00000381112 AP3B2Q13367 1082 aa22.34■■□□□ 1.17
CCM2-202ENST00000381112 SPECC1Q5M775 1068 aa22.34■■□□□ 1.17
CCM2-202ENST00000381112 RBM43Q6ZSC3 357 aaKnown RBP22.34■■□□□ 1.17
CCM2-202ENST00000381112 CNKSR2Q8WXI2 1034 aa22.34■■□□□ 1.17
CCM2-202ENST00000381112 TMOD4Q9NZQ9 345 aa22.34■■□□□ 1.17
CCM2-202ENST00000381112 ABCB11O95342 1321 aa22.33■■□□□ 1.17
CCM2-202ENST00000381112 GOLGA6L3A6NEY3 463 aa22.33■■□□□ 1.17
CCM2-202ENST00000381112 LAD1O00515 517 aa22.33■■□□□ 1.17
CCM2-202ENST00000381112 ZNF202O95125 648 aa22.33■■□□□ 1.17
CCM2-202ENST00000381112 TTLL12Q14166 644 aaPredicted RBP22.33■■□□□ 1.17
CCM2-202ENST00000381112 IL17AQ16552 155 aa22.33■■□□□ 1.17
CCM2-202ENST00000381112 MAP1SQ66K74 1059 aaPredicted RBP22.33■■□□□ 1.17
CCM2-202ENST00000381112 CLMNQ96JQ2 1002 aa22.33■■□□□ 1.17
CCM2-202ENST00000381112 P2RX7Q99572 595 aaKnown RBP22.33■■□□□ 1.17
CCM2-202ENST00000381112 TMEM60Q9H2L4 133 aa22.33■■□□□ 1.17
CCM2-202ENST00000381112 RRAGCQ9HB90 399 aa22.33■■□□□ 1.17
CCM2-202ENST00000381112 MRPL11Q9Y3B7 192 aaKnown RBP22.33■■□□□ 1.17
CCM2-202ENST00000381112 SYKP43405 635 aa22.32■■□□□ 1.16
CCM2-202ENST00000381112 AGBL1Q96MI9 1066 aa22.32■■□□□ 1.16
CCM2-202ENST00000381112 ELP3Q9H9T3 547 aa22.32■■□□□ 1.16
CCM2-202ENST00000381112 KCNH3Q9ULD8 1083 aa22.32■■□□□ 1.16
CCM2-202ENST00000381112 VWA3AA6NCI4 1184 aa22.32■■□□□ 1.16
CCM2-202ENST00000381112 FDX1P10109 184 aa22.32■■□□□ 1.16
CCM2-202ENST00000381112 PPATQ06203 517 aa22.32■■□□□ 1.16
CCM2-202ENST00000381112 ARMC9Q7Z3E5 817 aa22.32■■□□□ 1.16
CCM2-202ENST00000381112 ERO1BQ86YB8 467 aa22.32■■□□□ 1.16
CCM2-202ENST00000381112 ANO3Q9BYT9 981 aa22.32■■□□□ 1.16
CCM2-202ENST00000381112 FAM13BQ9NYF5 915 aa22.32■■□□□ 1.16
CCM2-202ENST00000381112 CCPG1Q9ULG6 757 aa22.32■■□□□ 1.16
CCM2-202ENST00000381112 SPDYE5A6NIY4 337 aa22.31■■□□□ 1.16
CCM2-202ENST00000381112 CTAGE5O15320 804 aa22.31■■□□□ 1.16
CCM2-202ENST00000381112 NEMFO60524 1076 aa22.31■■□□□ 1.16
CCM2-202ENST00000381112 FOSP01100 380 aaPredicted RBP22.31■■□□□ 1.16
CCM2-202ENST00000381112 PRPHP41219 470 aa22.31■■□□□ 1.16
CCM2-202ENST00000381112 USP49Q70CQ1 688 aa22.31■■□□□ 1.16
CCM2-202ENST00000381112 OTOFQ9HC10 1997 aa22.31■■□□□ 1.16
CCM2-202ENST00000381112 TRAF5O00463 557 aa22.3■■□□□ 1.16
CCM2-202ENST00000381112 VWA5AO00534 786 aa22.3■■□□□ 1.16
CCM2-202ENST00000381112 LDLRAD1Q5T700 205 aa22.3■■□□□ 1.16
CCM2-202ENST00000381112 PPP4R3AQ6IN85 833 aa22.3■■□□□ 1.16
CCM2-202ENST00000381112 CATSPERGQ6ZRH7 1159 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms