RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 ROBO3Q96MS0 1386 aa13.08□□□□□ -0.32
PITRM1-202ENST00000380989 RAD21O60216 631 aa13.08□□□□□ -0.32
PITRM1-202ENST00000380989 PDIA4P13667 645 aaKnown RBP13.08□□□□□ -0.32
PITRM1-202ENST00000380989 VSNL1P62760 191 aa13.08□□□□□ -0.32
PITRM1-202ENST00000380989 NCAPH2Q6IBW4 605 aa13.08□□□□□ -0.32
PITRM1-202ENST00000380989 LRRC47Q8N1G4 583 aaKnown RBP13.08□□□□□ -0.32
PITRM1-202ENST00000380989 STAG2Q8N3U4 1231 aa13.08□□□□□ -0.32
PITRM1-202ENST00000380989 FANCBQ8NB91 859 aa13.08□□□□□ -0.32
PITRM1-202ENST00000380989 NOA1Q8NC60 698 aaKnown RBP13.08□□□□□ -0.32
PITRM1-202ENST00000380989 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
PITRM1-202ENST00000380989 HDAC9Q9UKV0 1011 aa13.08□□□□□ -0.32
PITRM1-202ENST00000380989 ENC1O14682 589 aa13.08□□□□□ -0.32
PITRM1-202ENST00000380989 HDLBPQ00341 1268 aaKnown RBP13.08□□□□□ -0.32
PITRM1-202ENST00000380989 MYL5Q02045 173 aa13.08□□□□□ -0.32
PITRM1-202ENST00000380989 TROAPQ12815 778 aa13.08□□□□□ -0.32
PITRM1-202ENST00000380989 RNF181Q9P0P0 153 aa13.08□□□□□ -0.32
PITRM1-202ENST00000380989 KIF2AO00139 706 aaPredicted RBP13.07□□□□□ -0.32
PITRM1-202ENST00000380989 FAM193AP78312 1265 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 KIF23Q02241 960 aaPredicted RBP13.07□□□□□ -0.32
PITRM1-202ENST00000380989 RTN1Q16799 776 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 IDI2Q9BXS1 227 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 ARFGEF1Q9Y6D6 1849 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 RSRC2Q7L4I2 434 aaKnown RBP13.07□□□□□ -0.32
PITRM1-202ENST00000380989 CCDC84Q86UT8 332 aaPredicted RBP13.07□□□□□ -0.32
PITRM1-202ENST00000380989 TXLNBQ8N3L3 684 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 AGBL3Q8NEM8 1001 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 TMEM47Q9BQJ4 181 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 MRIQ9BWK5 157 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 KCNJ14Q9UNX9 436 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 CNTNAP1P78357 1384 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 SIPA1L1O43166 1804 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 MYO3BQ8WXR4 1341 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 LOC102724159A0A0B4J2E5 919 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 RNF225M0QZC1 329 aaPredicted RBP13.07□□□□□ -0.32
PITRM1-202ENST00000380989 EPS15P42566 896 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 PWP2Q15269 919 aaKnown RBP13.07□□□□□ -0.32
PITRM1-202ENST00000380989 ZNF569Q5MCW4 686 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 TRPM4Q8TD43 1214 aa13.07□□□□□ -0.32
PITRM1-202ENST00000380989 NOP2P46087 812 aaKnown RBP13.06□□□□□ -0.32
PITRM1-202ENST00000380989 TNIP1Q15025 636 aa13.06□□□□□ -0.32
PITRM1-202ENST00000380989 CATIPQ7Z7H3 387 aa13.06□□□□□ -0.32
PITRM1-202ENST00000380989 PNMA1Q8ND90 353 aa13.06□□□□□ -0.32
PITRM1-202ENST00000380989 CNNM3Q8NE01 707 aa13.06□□□□□ -0.32
PITRM1-202ENST00000380989 HDAC6Q9UBN7 1215 aa13.06□□□□□ -0.32
PITRM1-202ENST00000380989 PCNTO95613 3336 aa13.06□□□□□ -0.32
PITRM1-202ENST00000380989 LRRIQ3A6PVS8 624 aaPredicted RBP13.06□□□□□ -0.32
PITRM1-202ENST00000380989 SRGAP2O75044 1071 aa13.06□□□□□ -0.32
PITRM1-202ENST00000380989 HLA-DOAP06340 250 aa13.06□□□□□ -0.32
PITRM1-202ENST00000380989 LMNB1P20700 586 aa13.06□□□□□ -0.32
PITRM1-202ENST00000380989 IBSPP21815 317 aaPredicted RBP13.06□□□□□ -0.32
PITRM1-202ENST00000380989 CHMP4BP1P59074 171 aa13.06□□□□□ -0.32
PITRM1-202ENST00000380989 VPS33BQ9H267 617 aa13.06□□□□□ -0.32
PITRM1-202ENST00000380989 KAT14Q9H8E8 782 aa13.06□□□□□ -0.32
PITRM1-202ENST00000380989 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
PITRM1-202ENST00000380989 USP17L2Q6R6M4 530 aa13.05□□□□□ -0.32
PITRM1-202ENST00000380989 MYH15Q9Y2K3 1946 aa13.05□□□□□ -0.32
PITRM1-202ENST00000380989 AFMP43652 599 aa13.05□□□□□ -0.32
PITRM1-202ENST00000380989 SRBD1Q8N5C6 995 aaKnown RBP13.05□□□□□ -0.32
PITRM1-202ENST00000380989 GPATCH11Q8N954 259 aa13.05□□□□□ -0.32
PITRM1-202ENST00000380989 SHISA4Q96DD7 197 aa13.05□□□□□ -0.32
PITRM1-202ENST00000380989 FRMPD2Q68DX3 1309 aaPredicted RBP13.05□□□□□ -0.32
PITRM1-202ENST00000380989 LTBP3Q9NS15 1303 aa13.05□□□□□ -0.32
PITRM1-202ENST00000380989 FAM205CA6NFA0 338 aa13.05□□□□□ -0.32
PITRM1-202ENST00000380989 POLR2DO15514 142 aaKnown RBP13.05□□□□□ -0.32
PITRM1-202ENST00000380989 CCT6AP40227 531 aaKnown RBP13.05□□□□□ -0.32
PITRM1-202ENST00000380989 GPR162Q16538 588 aa13.05□□□□□ -0.32
PITRM1-202ENST00000380989 KCND1Q9NSA2 647 aa13.05□□□□□ -0.32
PITRM1-202ENST00000380989 PI4KBQ9UBF8 816 aa13.05□□□□□ -0.32
PITRM1-202ENST00000380989 NRDCO43847 1150 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 BEND6Q5SZJ8 279 aaPredicted RBP13.04□□□□□ -0.32
PITRM1-202ENST00000380989 C9orf131Q5VYM1 1079 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 GPR161Q8N6U8 529 aaKnown RBP13.04□□□□□ -0.32
PITRM1-202ENST00000380989 LLPHQ9BRT6 129 aaKnown RBP13.04□□□□□ -0.32
PITRM1-202ENST00000380989 ALG1Q9BT22 464 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 MAPK8IP1Q9UQF2 711 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 PCP11498 1178 aaKnown RBP13.04□□□□□ -0.32
PITRM1-202ENST00000380989 RBL2Q08999 1139 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 SLC35G1Q2M3R5 365 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 NEDD1Q8NHV4 660 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 KCNG4Q8TDN1 519 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 TMOD2Q9NZR1 351 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 V9GY48 417 aaPredicted RBP13.04□□□□□ -0.32
PITRM1-202ENST00000380989 SBF1O95248 1867 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 ACTN2P35609 894 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 NR5A1Q13285 461 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 RASA3Q14644 834 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 SEPT2Q15019 361 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 DNAJC21Q5F1R6 531 aaKnown RBP13.04□□□□□ -0.32
PITRM1-202ENST00000380989 KRT40Q6A162 431 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 SLC35F6Q8N357 371 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 POLR3EQ9NVU0 708 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 SERTAD1Q9UHV2 236 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 HACL1Q9UJ83 578 aa13.04□□□□□ -0.32
PITRM1-202ENST00000380989 MYH8P13535 1937 aa13.03□□□□□ -0.32
PITRM1-202ENST00000380989 A0A1W2PQ27 194 aa13.03□□□□□ -0.32
PITRM1-202ENST00000380989 A0A1W2PQ64 194 aa13.03□□□□□ -0.32
PITRM1-202ENST00000380989 A0A1W2PQD8 194 aa13.03□□□□□ -0.32
PITRM1-202ENST00000380989 USP17L5A8MUK1 530 aa13.03□□□□□ -0.32
PITRM1-202ENST00000380989 ADAMTS3O15072 1205 aa13.03□□□□□ -0.32
PITRM1-202ENST00000380989 ARHGAP6O43182 974 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms