RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 SRGNP10124 158 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 PLCG1P19174 1290 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 GNA11P29992 359 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 PPP1R2P41236 205 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 AMPD3Q01432 767 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 NONOQ15233 471 aaKnown RBP eCLIP18.28■□□□□ 0.52
VPS16-203ENST00000380469 LETM2Q2VYF4 491 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 ZNF804AQ7Z570 1209 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 SLC44A5Q8NCS7 719 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 SPZ1Q9BXG8 430 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 SAP30BPQ9UHR5 308 aaKnown RBP18.28■□□□□ 0.52
VPS16-203ENST00000380469 B4DLN1 442 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 EIF3JO75822 258 aaKnown RBP18.28■□□□□ 0.52
VPS16-203ENST00000380469 RASA1P20936 1047 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 CCNE1P24864 410 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 AMPD2Q01433 879 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 PDE4DQ08499 809 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 MAPKAPK5Q8IW41 473 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 RETREG2Q8NC44 543 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 P2RX5Q93086 422 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 SMCO2A6NFE2 343 aa18.27■□□□□ 0.52
VPS16-203ENST00000380469 PSMD14O00487 310 aa18.27■□□□□ 0.52
VPS16-203ENST00000380469 TRIM21P19474 475 aaKnown RBP18.27■□□□□ 0.52
VPS16-203ENST00000380469 CYLC1P35663 651 aaPredicted RBP18.27■□□□□ 0.52
VPS16-203ENST00000380469 TBC1D8BQ0IIM8 1120 aa18.27■□□□□ 0.52
VPS16-203ENST00000380469 MCM6Q14566 821 aa18.27■□□□□ 0.52
VPS16-203ENST00000380469 TXNRD1Q16881 649 aa18.27■□□□□ 0.52
VPS16-203ENST00000380469 CCDC122Q5T0U0 273 aa18.27■□□□□ 0.52
VPS16-203ENST00000380469 SOGA3Q5TF21 947 aa18.27■□□□□ 0.52
VPS16-203ENST00000380469 KIAA1328Q86T90 577 aa18.27■□□□□ 0.52
VPS16-203ENST00000380469 CERS3Q8IU89 383 aa18.27■□□□□ 0.52
VPS16-203ENST00000380469 EHBP1Q8NDI1 1231 aa18.27■□□□□ 0.52
VPS16-203ENST00000380469 RRP36Q96EU6 259 aaKnown RBP18.27■□□□□ 0.52
VPS16-203ENST00000380469 DUSP9Q99956 384 aaKnown RBP18.27■□□□□ 0.52
VPS16-203ENST00000380469 ABCB6Q9NP58 842 aa18.27■□□□□ 0.52
VPS16-203ENST00000380469 IPO7O95373 1038 aaKnown RBP18.27■□□□□ 0.51
VPS16-203ENST00000380469 ASIC1P78348 528 aa18.27■□□□□ 0.51
VPS16-203ENST00000380469 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.51
VPS16-203ENST00000380469 WDR59Q6PJI9 974 aa18.27■□□□□ 0.51
VPS16-203ENST00000380469 PCMTD1Q96MG8 357 aaPredicted RBP18.27■□□□□ 0.51
VPS16-203ENST00000380469 C7orf25Q9BPX7 421 aa18.27■□□□□ 0.51
VPS16-203ENST00000380469 TRIM9Q9C026 710 aa18.27■□□□□ 0.51
VPS16-203ENST00000380469 TRIM10Q9UDY6 481 aa18.27■□□□□ 0.51
VPS16-203ENST00000380469 SEC63Q9UGP8 760 aaKnown RBP18.27■□□□□ 0.51
VPS16-203ENST00000380469 RTCBQ9Y3I0 505 aaKnown RBP18.27■□□□□ 0.51
VPS16-203ENST00000380469 TFRCP02786 760 aaKnown RBP18.26■□□□□ 0.51
VPS16-203ENST00000380469 ST5P78524 1137 aa18.26■□□□□ 0.51
VPS16-203ENST00000380469 MSL3Q8N5Y2 521 aaKnown RBP18.26■□□□□ 0.51
VPS16-203ENST00000380469 EYA3Q99504 573 aa18.26■□□□□ 0.51
VPS16-203ENST00000380469 L1RE1Q9UN81 338 aa18.26■□□□□ 0.51
VPS16-203ENST00000380469 FLT1P17948 1338 aa18.26■□□□□ 0.51
VPS16-203ENST00000380469 COL24A1Q17RW2 1714 aa18.26■□□□□ 0.51
VPS16-203ENST00000380469 KRT86O43790 486 aa18.26■□□□□ 0.51
VPS16-203ENST00000380469 MTIF2P46199 727 aaKnown RBP18.26■□□□□ 0.51
VPS16-203ENST00000380469 MEA1Q16626 185 aa18.26■□□□□ 0.51
VPS16-203ENST00000380469 NCAPH2Q6IBW4 605 aa18.26■□□□□ 0.51
VPS16-203ENST00000380469 ZNF662Q6ZS27 426 aa18.26■□□□□ 0.51
VPS16-203ENST00000380469 TRAPPC11Q7Z392 1133 aa18.26■□□□□ 0.51
VPS16-203ENST00000380469 NEK8Q86SG6 692 aa18.26■□□□□ 0.51
VPS16-203ENST00000380469 LRRC15Q8TF66 581 aa18.26■□□□□ 0.51
VPS16-203ENST00000380469 CDK8P49336 464 aa18.25■□□□□ 0.51
VPS16-203ENST00000380469 HERVK_113P62684 666 aa18.25■□□□□ 0.51
VPS16-203ENST00000380469 VSNL1P62760 191 aa18.25■□□□□ 0.51
VPS16-203ENST00000380469 ZBED6P86452 979 aa18.25■□□□□ 0.51
VPS16-203ENST00000380469 GRAPQ13588 217 aa18.25■□□□□ 0.51
VPS16-203ENST00000380469 ANKRD40Q6AI12 368 aa18.25■□□□□ 0.51
VPS16-203ENST00000380469 CCDC170Q8IYT3 715 aa18.25■□□□□ 0.51
VPS16-203ENST00000380469 GRAPLQ8TC17 118 aaPredicted RBP18.25■□□□□ 0.51
VPS16-203ENST00000380469 CALML4Q96GE6 196 aa18.25■□□□□ 0.51
VPS16-203ENST00000380469 CNOT6LQ96LI5 555 aaKnown RBP18.25■□□□□ 0.51
VPS16-203ENST00000380469 PDE11AQ9HCR9 933 aa18.25■□□□□ 0.51
VPS16-203ENST00000380469 TECP42680 631 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 GRIK5Q16478 980 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 CNNM4Q6P4Q7 775 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 JAKMIP2Q96AA8 810 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 NOC4LQ9BVI4 516 aaKnown RBP18.24■□□□□ 0.51
VPS16-203ENST00000380469 SAR1BQ9Y6B6 198 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 H3BQF6 201 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 SMARCA1P28370 1054 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 STK4Q13043 487 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 C16orf86Q6ZW13 317 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 NOA1Q8NC60 698 aaKnown RBP18.24■□□□□ 0.51
VPS16-203ENST00000380469 NEDD1Q8NHV4 660 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 EXOC4Q96A65 974 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 CPVLQ9H3G5 476 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 NHEJ1Q9H9Q4 299 aaPredicted RBP18.24■□□□□ 0.51
VPS16-203ENST00000380469 AGPAT5Q9NUQ2 364 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 NAV1Q8NEY1 1877 aa18.24■□□□□ 0.51
VPS16-203ENST00000380469 ENC1O14682 589 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 ORC2Q13416 577 aaPredicted RBP18.23■□□□□ 0.51
VPS16-203ENST00000380469 FKBP15Q5T1M5 1219 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 ARHGEF1Q92888 912 aaKnown RBP18.23■□□□□ 0.51
VPS16-203ENST00000380469 RTFDC1Q9BY42 306 aaPredicted RBP18.23■□□□□ 0.51
VPS16-203ENST00000380469 TTYH3Q9C0H2 523 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 VAT1LQ9HCJ6 419 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 ADAM21Q9UKJ8 722 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 EIF3CLB5ME19 914 aaKnown RBP18.23■□□□□ 0.51
VPS16-203ENST00000380469 MCM3P25205 808 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 BTDP43251 543 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 WDR93Q6P2C0 686 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms