RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 AK8Q96MA6 479 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 KNDC1Q76NI1 1749 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 HARSP12081 509 aaKnown RBP15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 ARHGEF16Q5VV41 709 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 MCF2L2Q86YR7 1114 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 MYOCDQ8IZQ8 938 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 MRFAP1L1Q96HT8 127 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 TACC1O75410 805 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 ADKP55263 362 aaKnown RBP15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 CLEC10AQ8IUN9 316 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 CALCOCO1Q9P1Z2 691 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 F5H6K3 240 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 NOP56O00567 594 aaKnown RBP15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 GCFC2P16383 781 aaKnown RBP15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 KLRC3Q07444 240 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 MORC3Q14149 939 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 GRM4Q14833 912 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 SUPT20HL1Q3ZLR7 823 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 ANKRD35Q8N283 1001 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 POLLQ9UGP5 575 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 ZBTB12Q9Y330 459 aaPredicted RBP15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 ANKRD26Q9UPS8 1709 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 DKC1O60832 514 aaKnown RBP eCLIP15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 CTDNEP1O95476 244 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 FDPSP14324 419 aaKnown RBP15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 FAM26FQ5R3K3 315 aa15.78■□□□□ 0.12
SHROOM1-203ENST00000378679 ARHGAP6O43182 974 aa15.77■□□□□ 0.12
SHROOM1-203ENST00000378679 HOXA13P31271 388 aaPredicted RBP15.77■□□□□ 0.12
SHROOM1-203ENST00000378679 ELF2Q15723 593 aa15.77■□□□□ 0.12
SHROOM1-203ENST00000378679 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.12
SHROOM1-203ENST00000378679 CRACR2AQ9BSW2 395 aa15.77■□□□□ 0.12
SHROOM1-203ENST00000378679 ZNF341Q9BYN7 854 aa15.77■□□□□ 0.12
SHROOM1-203ENST00000378679 WTIPA6NIX2 430 aaPredicted RBP15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 PABPC4Q13310 644 aaKnown RBP eCLIP15.77■□□□□ 0.114e-10■■■□□ 17.1
SHROOM1-203ENST00000378679 TRIM14Q14142 442 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 CCDC122Q5T0U0 273 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 LARP4BQ92615 738 aaKnown RBP15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 IMPG2Q9BZV3 1241 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 FAM207AQ9NSI2 230 aaPredicted RBP15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 NRBP1Q9UHY1 535 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 PCDHB13Q9Y5F0 798 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 CTAGE9A4FU28 777 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 KCNJ18B7U540 433 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 USP17L10C9JJH3 530 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 EXOC3O60645 756 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 SLU7O95391 586 aaKnown RBP15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 TUBB4AP04350 444 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 KCNJ12Q14500 433 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 GADL1Q6ZQY3 521 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 GOLPH3LQ9H4A5 285 aa15.77■□□□□ 0.11
SHROOM1-203ENST00000378679 PSDA5PKW4 1024 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 GOLGA6L10A6NI86 522 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 GRIPAP1Q4V328 841 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 LRCH2Q5VUJ6 765 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 ARL6IP4Q66PJ3 421 aaKnown RBP15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 CCDC84Q86UT8 332 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 IFT74Q96LB3 600 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 OSBPL5Q9H0X9 879 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 SH3GLB2Q9NR46 395 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 USP17L15C9J2P7 530 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 USP17L13C9JLJ4 530 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 USP17L11C9JVI0 530 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 USP17L18D6R9N7 530 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 USP17L22D6RA61 530 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 USP17L17D6RBQ6 530 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 USP17L19D6RCP7 530 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 USP17L20D6RJB6 530 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 ZBTB5O15062 677 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 USP17L24Q0WX57 530 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 USP17L6PQ6QN14 398 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 FMR1NBQ8N0W7 255 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 RDH13Q8NBN7 331 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 RIOK1Q9BRS2 568 aaKnown RBP15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 PRM3Q9NNZ6 103 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 MAN1B1Q9UKM7 699 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 GPR75-ASB3A0A0A6YYF3 556 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 CALUO43852 315 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 DESP17661 470 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 MCM6Q14566 821 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 IFI16Q16666 785 aaKnown RBP15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 GNPTABQ3T906 1256 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 CDC42EP5Q6NZY7 148 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 PANK4Q9NVE7 773 aa15.76■□□□□ 0.11
SHROOM1-203ENST00000378679 ERCC5P28715 1186 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 CUEDC2Q9H467 287 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 RESP18Q5W5W9 173 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 MTMR4Q9NYA4 1195 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 HPS5Q9UPZ3 1129 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 CTAGE15A4D2H0 777 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 SORBS3O60504 671 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 CTAGE8P0CG41 777 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 RASA1P20936 1047 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 SETQ01105 290 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 TAF3Q5VWG9 929 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 CTAGE6Q86UF2 777 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 CTAGE4Q8IX94 777 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 TSPYL1Q9H0U9 437 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 NLRC4Q9NPP4 1024 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 GINS2Q9Y248 185 aa15.75■□□□□ 0.11
SHROOM1-203ENST00000378679 PLCG1P19174 1290 aa15.74■□□□□ 0.11
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