RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 GALNT17Q6IS24 598 aa18.12■□□□□ 0.49
CCDC107-204ENST00000378409 MB21D1Q8N884 522 aa18.12■□□□□ 0.49
CCDC107-204ENST00000378409 PTPN18Q99952 460 aa18.12■□□□□ 0.49
CCDC107-204ENST00000378409 RASSF10A6NK89 507 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 CYP2C8P10632 490 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 ALAS1P13196 640 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 OAZ1P54368 228 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 NR5A1Q13285 461 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 TMEM132BQ14DG7 1078 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 DEFB115Q30KQ5 88 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 SNRNP48Q6IEG0 339 aaKnown RBP18.11■□□□□ 0.49
CCDC107-204ENST00000378409 LBX2Q6XYB7 198 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 BLIDQ8IZY5 108 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 DAGLBQ8NCG7 672 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 BICD2Q8TD16 824 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 TNPO1Q92973 898 aaKnown RBP18.11■□□□□ 0.49
CCDC107-204ENST00000378409 CUL5Q93034 780 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 PAGR1Q9BTK6 254 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 FOXP1Q9H334 677 aaPredicted RBP18.11■□□□□ 0.49
CCDC107-204ENST00000378409 ZSCAN16Q9H4T2 348 aaPredicted RBP18.11■□□□□ 0.49
CCDC107-204ENST00000378409 PSTPIP2Q9H939 334 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 RIC8AQ9NPQ8 531 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 PNMA2Q9UL42 364 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 MRPL11Q9Y3B7 192 aaKnown RBP18.11■□□□□ 0.49
CCDC107-204ENST00000378409 MYH7BA7E2Y1 1941 aa18.11■□□□□ 0.49
CCDC107-204ENST00000378409 ADAMTS3O15072 1205 aa18.1■□□□□ 0.49
CCDC107-204ENST00000378409 SREBF2Q12772 1141 aa18.1■□□□□ 0.49
CCDC107-204ENST00000378409 FOXD4L6Q3SYB3 417 aaPredicted RBP18.1■□□□□ 0.49
CCDC107-204ENST00000378409 FOXD4L3Q6VB84 417 aaPredicted RBP18.1■□□□□ 0.49
CCDC107-204ENST00000378409 SMCR8Q8TEV9 937 aaPredicted RBP18.1■□□□□ 0.49
CCDC107-204ENST00000378409 HOMER2Q9NSB8 354 aa18.1■□□□□ 0.49
CCDC107-204ENST00000378409 BTBD7Q9P203 1132 aa18.1■□□□□ 0.49
CCDC107-204ENST00000378409 ZNF214Q9UL59 606 aaPredicted RBP18.1■□□□□ 0.49
CCDC107-204ENST00000378409 IGF2BP3O00425 579 aaKnown RBP eCLIP18.09■□□□□ 0.49
CCDC107-204ENST00000378409 ATP2A1O14983 1001 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 PEX10O60683 326 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 U2AF2P26368 475 aaKnown RBP eCLIP18.09■□□□□ 0.49
CCDC107-204ENST00000378409 STAT3P40763 770 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 MRPL12P52815 198 aaKnown RBP18.09■□□□□ 0.49
CCDC107-204ENST00000378409 INHBEP58166 350 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 POTEEQ6S8J3 1075 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 BRAPQ7Z569 592 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 NOSTRINQ8IVI9 506 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 REXO1Q8N1G1 1221 aaKnown RBP18.09■□□□□ 0.49
CCDC107-204ENST00000378409 RASGRP4Q8TDF6 673 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 GTF3C2Q8WUA4 911 aaPredicted RBP18.09■□□□□ 0.49
CCDC107-204ENST00000378409 CAPNS2Q96L46 248 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 TRERF1Q96PN7 1200 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 PARK7Q99497 189 aaKnown RBP18.09■□□□□ 0.49
CCDC107-204ENST00000378409 TEX13BQ9BXU2 312 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 GLT8D2Q9H1C3 349 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 ATP6V1DQ9Y5K8 247 aa18.09■□□□□ 0.49
CCDC107-204ENST00000378409 ZNFX1Q9P2E3 1918 aaKnown RBP18.09■□□□□ 0.49
CCDC107-204ENST00000378409 CNMDO75829 334 aa18.08■□□□□ 0.48
CCDC107-204ENST00000378409 NOGQ13253 232 aa18.08■□□□□ 0.48
CCDC107-204ENST00000378409 UBE2SQ16763 222 aa18.08■□□□□ 0.48
CCDC107-204ENST00000378409 FAM173BQ6P4H8 233 aa18.08■□□□□ 0.48
CCDC107-204ENST00000378409 IFNL1Q8IU54 200 aa18.08■□□□□ 0.48
CCDC107-204ENST00000378409 TNFRSF25Q93038 417 aa18.08■□□□□ 0.48
CCDC107-204ENST00000378409 ZIC5Q96T25 663 aa18.08■□□□□ 0.48
CCDC107-204ENST00000378409 RNF146Q9NTX7 359 aa18.08■□□□□ 0.48
CCDC107-204ENST00000378409 BIN2Q9UBW5 565 aaPredicted RBP18.08■□□□□ 0.48
CCDC107-204ENST00000378409 PCDHA6Q9UN73 950 aa18.08■□□□□ 0.48
CCDC107-204ENST00000378409 RABGAP1Q9Y3P9 1069 aa18.08■□□□□ 0.48
CCDC107-204ENST00000378409 RIPK3Q9Y572 518 aa18.08■□□□□ 0.48
CCDC107-204ENST00000378409 PCDHA8Q9Y5H6 950 aa18.08■□□□□ 0.48
CCDC107-204ENST00000378409 M0R2N6 131 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 NFIBO00712 420 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 OPLAHO14841 1288 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 AOC2O75106 756 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 CFBP00751 764 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 MUM1L1Q5H9M0 696 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 JAKMIP3Q5VZ66 844 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 USP17L6PQ6QN14 398 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 SPATC1LQ9H0A9 340 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 TXNRD2Q9NNW7 524 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 ZCCHC17Q9NP64 241 aaKnown RBP18.07■□□□□ 0.48
CCDC107-204ENST00000378409 TMEM260Q9NX78 707 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 RBPJLQ9UBG7 517 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 PLXNB2O15031 1838 aa18.07■□□□□ 0.48
CCDC107-204ENST00000378409 CCDC194A0A1B0GVG4 234 aa18.06■□□□□ 0.48
CCDC107-204ENST00000378409 FAM205CA6NFA0 338 aa18.06■□□□□ 0.48
CCDC107-204ENST00000378409 HOXA13P31271 388 aaPredicted RBP18.06■□□□□ 0.48
CCDC107-204ENST00000378409 GCLCP48506 637 aaPredicted RBP18.06■□□□□ 0.48
CCDC107-204ENST00000378409 TAF1CQ15572 869 aaPredicted RBP18.06■□□□□ 0.48
CCDC107-204ENST00000378409 TKFCQ3LXA3 575 aa18.06■□□□□ 0.48
CCDC107-204ENST00000378409 NOM1Q5C9Z4 860 aaKnown RBP18.06■□□□□ 0.48
CCDC107-204ENST00000378409 PIK3AP1Q6ZUJ8 805 aa18.06■□□□□ 0.48
CCDC107-204ENST00000378409 MCF2L2Q86YR7 1114 aa18.06■□□□□ 0.48
CCDC107-204ENST00000378409 RIOX2Q8IUF8 465 aa18.06■□□□□ 0.48
CCDC107-204ENST00000378409 CLEC4DQ8WXI8 215 aa18.06■□□□□ 0.48
CCDC107-204ENST00000378409 CHAMP1Q96JM3 812 aa18.06■□□□□ 0.48
CCDC107-204ENST00000378409 LCTP09848 1927 aa18.06■□□□□ 0.48
CCDC107-204ENST00000378409 GCOM1H8Y6P7 765 aaPredicted RBP18.05■□□□□ 0.48
CCDC107-204ENST00000378409 MEIS2O14770 477 aa18.05■□□□□ 0.48
CCDC107-204ENST00000378409 POLR2MP0CAP2 368 aa18.05■□□□□ 0.48
CCDC107-204ENST00000378409 TM4SF4P48230 202 aa18.05■□□□□ 0.48
CCDC107-204ENST00000378409 CLK2P49760 499 aaKnown RBP18.05■□□□□ 0.48
CCDC107-204ENST00000378409 EARS2Q5JPH6 523 aaKnown RBP18.05■□□□□ 0.48
CCDC107-204ENST00000378409 MYSM1Q5VVJ2 828 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms