RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 NOC4LQ9BVI4 516 aaKnown RBP17.66■□□□□ 0.42
CKAP4-201ENST00000378026 PCDHA13Q9Y5I0 950 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 ABCC12Q96J65 1359 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 BACH1O14867 736 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 AKR1B10O60218 316 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 SCP2P22307 547 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 TRADDQ15628 312 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 TOM1L2Q6ZVM7 507 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 MAATS1Q7Z4T9 603 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 RASGRP4Q8TDF6 673 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 FBXO3Q9UK99 471 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 SCN11AQ9UI33 1791 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 CSF1RP07333 972 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 IFIT1BQ5T764 474 aaKnown RBP17.65■□□□□ 0.42
CKAP4-201ENST00000378026 CCDC170Q8IYT3 715 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 CCT8L2Q96SF2 557 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 EPN3Q9H201 632 aa17.65■□□□□ 0.42
CKAP4-201ENST00000378026 FSBPO95073 299 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 NR1D1P20393 614 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 TMC4Q7Z404 712 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 ENAHQ8N8S7 591 aaPredicted RBP17.64■□□□□ 0.41
CKAP4-201ENST00000378026 CNOT6LQ96LI5 555 aaKnown RBP17.64■□□□□ 0.41
CKAP4-201ENST00000378026 KLC4Q9NSK0 619 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 HYOU1Q9Y4L1 999 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 MYH7P12883 1935 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 EIF4A3P38919 411 aaKnown RBP17.64■□□□□ 0.41
CKAP4-201ENST00000378026 NPY5RQ15761 445 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 CATIPQ7Z7H3 387 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 PURBQ96QR8 312 aaKnown RBP17.64■□□□□ 0.41
CKAP4-201ENST00000378026 TTYH3Q9C0H2 523 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 SH2D4AQ9H788 454 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 DONSONQ9NYP3 566 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 SALL4Q9UJQ4 1053 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 MYH13Q9UKX3 1938 aa17.64■□□□□ 0.41
CKAP4-201ENST00000378026 EPB41P11171 864 aaKnown RBP17.63■□□□□ 0.41
CKAP4-201ENST00000378026 CCDC40Q4G0X9 1142 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 MICALCLQ6ZW33 695 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 NLRP14Q86W24 1093 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 ZBTB38Q8NAP3 1195 aaPredicted RBP17.63■□□□□ 0.41
CKAP4-201ENST00000378026 HPS3Q969F9 1004 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 ARHGAP20Q9P2F6 1191 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 LRP2BPQ9P2M1 347 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 ATRNO75882 1429 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 PRPF3O43395 683 aaKnown RBP17.63■□□□□ 0.41
CKAP4-201ENST00000378026 PPP1R37O75864 691 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 HEXIM1O94992 359 aaKnown RBP17.63■□□□□ 0.41
CKAP4-201ENST00000378026 KIF11P52732 1056 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 CCDC178Q5BJE1 867 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 CCDC13Q8IYE1 715 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 ESR2Q92731 530 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 THAP9Q9H5L6 903 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 MMRN2Q9H8L6 949 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 LAMB4A4D0S4 1761 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 BCL9LQ86UU0 1499 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 EPHB6O15197 1021 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 UQCRFS1P1P0C7P4 283 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 RASSF7Q02833 373 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 SF3A3Q12874 501 aaKnown RBP eCLIP17.63■□□□□ 0.41
CKAP4-201ENST00000378026 PTGISQ16647 500 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 N4BP2L2Q92802 583 aaPredicted RBP17.63■□□□□ 0.41
CKAP4-201ENST00000378026 CCDC114Q96M63 670 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 ALS2CR12Q96Q35 445 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 TSGA10Q9BZW7 698 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.63■□□□□ 0.41
CKAP4-201ENST00000378026 AKAP11Q9UKA4 1901 aa17.63■□□□□ 0.41
CKAP4-201ENST00000378026 FUT2Q10981 343 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 SEC23AQ15436 765 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 HLFQ16534 295 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 ANKRD40Q6AI12 368 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 MYCBPAPQ8TBZ2 947 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 TNFRSF25Q93038 417 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 DUSP9Q99956 384 aaKnown RBP17.62■□□□□ 0.41
CKAP4-201ENST00000378026 RNF41Q9H4P4 317 aaPredicted RBP17.62■□□□□ 0.41
CKAP4-201ENST00000378026 BCCIPQ9P287 314 aaKnown RBP eCLIP17.62■□□□□ 0.41
CKAP4-201ENST00000378026 TJP1Q07157 1748 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 FRMD3A2A2Y4 597 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 CHUKO15111 745 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 CDR1P51861 262 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 CEP85LQ5SZL2 805 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 TTI2Q6NXR4 508 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 KIF6Q6ZMV9 814 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 VGLL2Q8N8G2 317 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 PROCA1Q8NCQ7 364 aaPredicted RBP17.62■□□□□ 0.41
CKAP4-201ENST00000378026 SCLT1Q96NL6 688 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 ABCF2Q9UG63 623 aa17.62■□□□□ 0.41
CKAP4-201ENST00000378026 PDHBP11177 359 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 TCP1P17987 556 aaKnown RBP17.61■□□□□ 0.41
CKAP4-201ENST00000378026 ARID4AP29374 1257 aaPredicted RBP17.61■□□□□ 0.41
CKAP4-201ENST00000378026 MAGEA1P43355 309 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 ZSCAN10Q96SZ4 725 aaPredicted RBP17.61■□□□□ 0.41
CKAP4-201ENST00000378026 NUP58Q9BVL2 599 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 DISC1Q9NRI5 854 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 PACSIN2Q9UNF0 486 aaPredicted RBP17.61■□□□□ 0.41
CKAP4-201ENST00000378026 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.61■□□□□ 0.41
CKAP4-201ENST00000378026 NMT2O60551 498 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 E2F5Q15329 346 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 NAALADL2Q58DX5 795 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 KDM7AQ6ZMT4 941 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 ZNF662Q6ZS27 426 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 IFT20Q8IY31 132 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms