RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 EPB41L5Q9HCM4 733 aa17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 SALL4Q9UJQ4 1053 aa17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 NKRFO15226 690 aaKnown RBP eCLIP17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 GUCY2DQ02846 1103 aa17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 CRACR2BQ8N4Y2 399 aaPredicted RBP17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 SPEF2Q9C093 1822 aa17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 MGRN1O60291 552 aa17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 PRLRP16471 622 aa17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 TMOD1P28289 359 aa17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 GBP2P32456 591 aaPredicted RBP17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 XRCC4Q13426 336 aa17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 ZNF174Q15697 407 aa17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 ZNF658Q5TYW1 1059 aaPredicted RBP17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 TBC1D31Q96DN5 1066 aa17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 BCCIPQ9P287 314 aaKnown RBP eCLIP17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 AFDNP55196 1824 aaKnown RBP17.4■□□□□ 0.38
CSNK1A1-202ENST00000377843 TCIRG1Q13488 830 aa17.39■□□□□ 0.38
CSNK1A1-202ENST00000377843 CCDC181Q5TID7 509 aa17.39■□□□□ 0.38
CSNK1A1-202ENST00000377843 PPP4R3AQ6IN85 833 aa17.39■□□□□ 0.38
CSNK1A1-202ENST00000377843 CCDC170Q8IYT3 715 aa17.39■□□□□ 0.38
CSNK1A1-202ENST00000377843 CASKIN2Q8WXE0 1202 aa17.39■□□□□ 0.38
CSNK1A1-202ENST00000377843 SEC16BQ96JE7 1060 aa17.39■□□□□ 0.38
CSNK1A1-202ENST00000377843 HYOU1Q9Y4L1 999 aa17.39■□□□□ 0.38
CSNK1A1-202ENST00000377843 DCCP43146 1447 aa17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 ANKRD18BA2A2Z9 1011 aa17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 GMNCA6NCL1 334 aa17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 TACC1O75410 805 aa17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 HEXIM1O94992 359 aaKnown RBP17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 IPO7O95373 1038 aaKnown RBP17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 SRGNP10124 158 aa17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 LIFRP42702 1097 aa17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 RTN1Q16799 776 aa17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 CCDC50Q8IVM0 306 aa17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 OR2W6PQ8NHA6 318 aa17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 STAMBPL1Q96FJ0 436 aa17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 SLC12A6Q9UHW9 1150 aa17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 PLAAQ9Y263 795 aa17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 SIPA1L3O60292 1781 aaPredicted RBP17.39■□□□□ 0.37
CSNK1A1-202ENST00000377843 hCG_1642624A0A1W2PR95 340 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 NUTM2BA6NNL0 878 aaPredicted RBP17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 NUTM2EB1AL46 878 aaPredicted RBP17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 H7C1D1 291 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 TRAPPC3O43617 180 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 ZPR1O75312 459 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 TRIM21P19474 475 aaKnown RBP17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 MAP2K1Q02750 393 aaPredicted RBP17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 GLE1Q53GS7 698 aaKnown RBP17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 TRIM22Q8IYM9 498 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 MREGQ8N565 214 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 TLR10Q9BXR5 811 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 TMBIM4Q9HC24 238 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 RIPOR2Q9Y4F9 1068 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 TNS3Q68CZ2 1445 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 SLIT3O75094 1523 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 HMGB1P1B2RPK0 211 aaPredicted RBP17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 DEXIO95424 95 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 ATP6V1G2O95670 118 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 RPN1P04843 607 aaKnown RBP17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 PDE6BP35913 854 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 ELF3P78545 371 aaPredicted RBP17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 TTLL7Q6ZT98 887 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 IFT20Q8IY31 132 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 ANKRD13CQ8N6S4 541 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 MAB21L3Q8N8X9 362 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 KIF9Q9HAQ2 790 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 PCDHA13Q9Y5I0 950 aa17.38■□□□□ 0.37
CSNK1A1-202ENST00000377843 SRRM3A6NNA2 597 aaPredicted RBP17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 IRF6O14896 467 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 GTPBP6O43824 516 aaPredicted RBP17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 TCP1P17987 556 aaKnown RBP17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 ADD2P35612 726 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 IL17AQ16552 155 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 KCTD19Q17RG1 926 aaPredicted RBP17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 LACTB2Q53H82 288 aaPredicted RBP17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 MAATS1Q7Z4T9 603 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 NOD2Q9HC29 1040 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 CNOT8Q9UFF9 292 aaKnown RBP17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 RGPD5Q99666 1765 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 PRDM1O75626 825 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 SLC8A1P32418 973 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 SARNPP82979 210 aaKnown RBP17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 ZBED6P86452 979 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 ADSSL1Q8N142 457 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 THOC1Q96FV9 657 aaKnown RBP17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 IFIH1Q9BYX4 1025 aaKnown RBP17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 PRDM11Q9NQV5 511 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 ZNHIT6Q9NWK9 470 aaKnown RBP17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 ARHGAP20Q9P2F6 1191 aa17.37■□□□□ 0.37
CSNK1A1-202ENST00000377843 CDC25CP30307 473 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 SLC8A3P57103 927 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 PAK2Q13177 524 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 CDC37Q16543 378 aaPredicted RBP17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 NSMCE1Q8WV22 266 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 CCT6BQ92526 530 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 NUP58Q9BVL2 599 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 TSGA10Q9BZW7 698 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 GCKP35557 465 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 MCAMP43121 646 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms