RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 SLC37A4O43826 429 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 SERPINB2P05120 415 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 RFC4P35249 363 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 PLA2G4AP47712 749 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 GNAQP50148 359 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 CBX1P83916 185 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 TAOK2Q9UL54 1235 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 GOLGA6L9A6NEM1 432 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 UFL1O94874 794 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 TSPY3P0CV98 308 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 TSPY8P0CW00 308 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 PLCG1P19174 1290 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 CDK11BP21127 795 aaKnown RBP10.82□□□□□ -0.68
TRIM39-202ENST00000376659 HERVK_113P62684 666 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 ECM1Q16610 540 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 FOXR2Q6PJQ5 311 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 POTEDQ86YR6 584 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 ZC3H3Q8IXZ2 948 aaKnown RBP10.82□□□□□ -0.68
TRIM39-202ENST00000376659 ANKZF1Q9H8Y5 726 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 TMEM51Q9NW97 253 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 ANKIB1Q9P2G1 1089 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 hCG_1984214I3L0E3 225 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 USP5P45974 858 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 HYIQ5T013 277 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 USP17L2Q6R6M4 530 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 ZNF713Q8N859 430 aaPredicted RBP10.82□□□□□ -0.68
TRIM39-202ENST00000376659 CCDC148Q8NFR7 591 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 MBOAT7Q96N66 472 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 SRRTQ9BXP5 876 aaKnown RBP10.82□□□□□ -0.68
TRIM39-202ENST00000376659 SUGT1Q9Y2Z0 365 aa10.82□□□□□ -0.68
TRIM39-202ENST00000376659 BAG3O95817 575 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 SRGNP10124 158 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 GGA1Q9UJY5 639 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 PCDHA2Q9Y5H9 948 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 AFF2P51816 1311 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 PAPPA2Q9BXP8 1791 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 ZNFX1Q9P2E3 1918 aaKnown RBP10.81□□□□□ -0.68
TRIM39-202ENST00000376659 A0A0G2JS52 829 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 BBOX1O75936 387 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 TBC1D8O95759 1140 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 PARP1P09874 1014 aaKnown RBP10.81□□□□□ -0.68
TRIM39-202ENST00000376659 MAPK8IP2Q13387 824 aaPredicted RBP10.81□□□□□ -0.68
TRIM39-202ENST00000376659 ZCWPW2Q504Y3 356 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 SP8Q8IXZ3 490 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 MB21D1Q8N884 522 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 P2RX7Q99572 595 aaKnown RBP10.81□□□□□ -0.68
TRIM39-202ENST00000376659 SEMA6BQ9H3T3 888 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 TMEM260Q9NX78 707 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 CAPN11Q9UMQ6 739 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 ARID2Q68CP9 1835 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 DPY19L2P1Q6NXN4 242 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 PPP1R18Q6NYC8 613 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 SIAH1Q8IUQ4 282 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 MSANTD4Q8NCY6 345 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 HAS1Q92839 578 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 RBM17Q96I25 401 aaKnown RBP10.81□□□□□ -0.68
TRIM39-202ENST00000376659 PIGSQ96S52 555 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 RMND1Q9NWS8 449 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 ATP6V0A2Q9Y487 856 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 PHIPQ8WWQ0 1821 aa10.81□□□□□ -0.68
TRIM39-202ENST00000376659 H7C1D1 291 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 OR52Z1P0C646 297 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 AKR1B1P15121 316 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 EEF1GP26641 437 aaKnown RBP10.8□□□□□ -0.68
TRIM39-202ENST00000376659 APOBEC3HQ6NTF7 200 aaKnown RBP10.8□□□□□ -0.68
TRIM39-202ENST00000376659 SAMD1Q6SPF0 538 aaPredicted RBP10.8□□□□□ -0.68
TRIM39-202ENST00000376659 ACRBPQ8NEB7 543 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 RAB21Q9UL25 225 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 PNMA6AP0CW24 399 aaPredicted RBP10.8□□□□□ -0.68
TRIM39-202ENST00000376659 HNRNPH3P31942 346 aaKnown RBP10.8□□□□□ -0.68
TRIM39-202ENST00000376659 CCT6AP40227 531 aaKnown RBP10.8□□□□□ -0.68
TRIM39-202ENST00000376659 STAT6P42226 847 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 TRIM14Q14142 442 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 RRAGBQ5VZM2 374 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 CENPPQ6IPU0 288 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 KRT25Q7Z3Z0 450 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 HEATR3Q7Z4Q2 680 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 CNGA4Q8IV77 575 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 TEX11Q8IYF3 940 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 SEPT12Q8IYM1 358 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 ST7Q9NRC1 585 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 SIK3Q9Y2K2 1263 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 RLFQ13129 1914 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 SIP14410 1827 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 LCTP09848 1927 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 TTC26A0AVF1 554 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 LCA5LO95447 670 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 TFRCP02786 760 aaKnown RBP10.8□□□□□ -0.68
TRIM39-202ENST00000376659 STK4Q13043 487 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 MFSD14BQ5SR56 506 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 KLHL10Q6JEL2 608 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 DTHD1Q6ZMT9 781 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 LRRC55Q6ZSA7 311 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 KCNK18Q7Z418 384 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 CARD6Q9BX69 1037 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 EHD4Q9H223 541 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 EPC1Q9H2F5 836 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 JMJD4Q9H9V9 463 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 TAB2Q9NYJ8 693 aa10.8□□□□□ -0.68
TRIM39-202ENST00000376659 FIGNQ5HY92 759 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms