RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 FGF10O15520 208 aaPredicted RBP3.77□□□□□ -1.81
VPS13A-206ENST00000376646 INHBBP09529 407 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 ITGA4P13612 1032 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 RPTNQ6XPR3 784 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 KLHL6Q8WZ60 621 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 ZNF428Q96B54 188 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 TNFRSF12AQ9NP84 129 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 PRR13Q9NZ81 148 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 ACSL6Q9UKU0 697 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 ADAMTS20P59510 1910 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 GJA8P48165 433 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 YBX1P67809 324 aaKnown RBP3.77□□□□□ -1.81
VPS13A-206ENST00000376646 ADAT2Q7Z6V5 191 aaKnown RBP3.77□□□□□ -1.81
VPS13A-206ENST00000376646 JAMLQ86YT9 394 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 RGS22Q8NE09 1264 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 RASGRP4Q8TDF6 673 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 SMARCC1Q92922 1105 aaPredicted RBP3.77□□□□□ -1.81
VPS13A-206ENST00000376646 KLHL25Q9H0H3 589 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 FBLN5Q9UBX5 448 aa3.77□□□□□ -1.81
VPS13A-206ENST00000376646 MPOP05164 745 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 BMP7P18075 431 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 ARL4AP40617 200 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 HEATR6Q6AI08 1181 aaKnown RBP3.76□□□□□ -1.81
VPS13A-206ENST00000376646 AMIGO3Q86WK7 504 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 SIAH1Q8IUQ4 282 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 IGDCC3Q8IVU1 814 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 CPLX3Q8WVH0 158 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 ANAPC16Q96DE5 110 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 PTCHD1Q96NR3 888 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 BCAS3Q9H6U6 928 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 APEX2Q9UBZ4 518 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 SUSD2Q9UGT4 822 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 IRAK3Q9Y616 596 aa3.76□□□□□ -1.81
VPS13A-206ENST00000376646 A0A1W2PQ27 194 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 A0A1W2PQ64 194 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 A0A1W2PQC6 194 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 A0A1W2PQD8 194 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 N4BP3O15049 544 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 ZNF200P98182 395 aaPredicted RBP3.75□□□□□ -1.81
VPS13A-206ENST00000376646 SLC7A5Q01650 507 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 TCEAL1Q15170 157 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 PLEKHN1Q494U1 663 aaPredicted RBP3.75□□□□□ -1.81
VPS13A-206ENST00000376646 LDHDQ86WU2 507 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 MZB1Q8WU39 189 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 INPP5FQ9Y2H2 1132 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 SF3B6Q9Y3B4 125 aaKnown RBP3.75□□□□□ -1.81
VPS13A-206ENST00000376646 MRVI1Q9Y6F6 885 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 TRIM13O60858 407 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 LIMS1P48059 325 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 COL9A2Q14055 689 aaPredicted RBP3.75□□□□□ -1.81
VPS13A-206ENST00000376646 HLA-DQA1Q5Y7H0 255 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 BICRALQ6AI39 1079 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 KIAA1211LQ6NV74 962 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 CPNE8Q86YQ8 564 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 TMEFF1Q8IYR6 380 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 SIGLEC10Q96LC7 697 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 WHRNQ9P202 907 aa3.75□□□□□ -1.81
VPS13A-206ENST00000376646 CGGBP1Q9UFW8 167 aaPredicted RBP3.75□□□□□ -1.81
VPS13A-206ENST00000376646 POU4F1Q01851 419 aa3.74□□□□□ -1.81
VPS13A-206ENST00000376646 LAPTM5Q13571 262 aa3.74□□□□□ -1.81
VPS13A-206ENST00000376646 TTLL10Q6ZVT0 673 aa3.74□□□□□ -1.81
VPS13A-206ENST00000376646 C20orf173Q96LM9 149 aa3.74□□□□□ -1.81
VPS13A-206ENST00000376646 PHAXQ9H814 394 aaKnown RBP3.74□□□□□ -1.81
VPS13A-206ENST00000376646 SUGT1Q9Y2Z0 365 aa3.74□□□□□ -1.81
VPS13A-206ENST00000376646 RWDD3Q9Y3V2 267 aa3.74□□□□□ -1.81
VPS13A-206ENST00000376646 PCDHA5Q9Y5H7 936 aa3.74□□□□□ -1.81
VPS13A-206ENST00000376646 ZC3H12DA2A288 527 aaKnown RBP3.74□□□□□ -1.81
VPS13A-206ENST00000376646 PPP1R11O60927 126 aaPredicted RBP3.74□□□□□ -1.81
VPS13A-206ENST00000376646 DBHP09172 617 aa3.74□□□□□ -1.81
VPS13A-206ENST00000376646 ENDOUP21128 410 aaKnown RBP3.74□□□□□ -1.81
VPS13A-206ENST00000376646 NOP2P46087 812 aaKnown RBP3.74□□□□□ -1.81
VPS13A-206ENST00000376646 ZNF385BQ569K4 471 aa3.74□□□□□ -1.81
VPS13A-206ENST00000376646 VHLLQ6RSH7 139 aa3.74□□□□□ -1.81
VPS13A-206ENST00000376646 ZNF513Q8N8E2 541 aaPredicted RBP3.74□□□□□ -1.81
VPS13A-206ENST00000376646 DACT3Q96B18 629 aaPredicted RBP3.74□□□□□ -1.81
VPS13A-206ENST00000376646 CCSER2Q9H7U1 834 aa3.74□□□□□ -1.81
VPS13A-206ENST00000376646 A0A1W2PQJ5 194 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 B2RBV5 119 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 HRKO00198 91 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 IRS4O14654 1257 aaPredicted RBP3.73□□□□□ -1.81
VPS13A-206ENST00000376646 AURKAO14965 403 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 BUB1BO60566 1050 aaPredicted RBP3.73□□□□□ -1.81
VPS13A-206ENST00000376646 HOXA5P20719 270 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 BUD31P41223 144 aaPredicted RBP3.73□□□□□ -1.81
VPS13A-206ENST00000376646 MC3RP41968 323 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 AFF3P51826 1226 aaKnown RBP3.73□□□□□ -1.81
VPS13A-206ENST00000376646 TCERG1LQ5VWI1 586 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 CYP2R1Q6VVX0 501 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 FAM129CQ86XR2 697 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 C19orf47Q8N9M1 422 aaKnown RBP3.73□□□□□ -1.81
VPS13A-206ENST00000376646 SYT8Q8NBV8 401 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 TGIF2Q9GZN2 237 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 GPRC5CQ9NQ84 441 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 PDLIM7Q9NR12 457 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 GULP1Q9UBP9 304 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 DIS3Q9Y2L1 958 aaKnown RBP3.73□□□□□ -1.81
VPS13A-206ENST00000376646 C2orf71A6NGG8 1288 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 F8W031 263 aaPredicted RBP3.73□□□□□ -1.81
VPS13A-206ENST00000376646 PPM1BO75688 479 aa3.73□□□□□ -1.81
VPS13A-206ENST00000376646 KCNH1O95259 989 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 828.1 ms