RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 ERLIN1O75477 346 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 PABPC4Q13310 644 aaKnown RBP eCLIP11.24□□□□□ -0.61
ZNF550-203ENST00000376230 SF3B3Q15393 1217 aaKnown RBP11.24□□□□□ -0.61
ZNF550-203ENST00000376230 FBXO33Q7Z6M2 555 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 CHP1Q99653 195 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 BRIP1Q9BX63 1249 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 LRRC4BQ9NT99 713 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 POLLQ9UGP5 575 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 PCDHA4Q9UN74 947 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 THRAP3Q9Y2W1 955 aaKnown RBP11.24□□□□□ -0.61
ZNF550-203ENST00000376230 PCDHA1Q9Y5I3 950 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 C21orf2O43822 256 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 OR52Z1P0C646 297 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 FXR1P51114 621 aaKnown RBP eCLIP11.24□□□□□ -0.61
ZNF550-203ENST00000376230 COPB1P53618 953 aaKnown RBP11.24□□□□□ -0.61
ZNF550-203ENST00000376230 C12orf60Q5U649 245 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 RRAGAQ7L523 313 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 NEK8Q86SG6 692 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 REXO1L1PQ8IX06 675 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 MRPL44Q9H9J2 332 aaKnown RBP11.24□□□□□ -0.61
ZNF550-203ENST00000376230 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.24□□□□□ -0.61
ZNF550-203ENST00000376230 KIAA1024Q9UPX6 916 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 FAN1Q9Y2M0 1017 aa11.24□□□□□ -0.61
ZNF550-203ENST00000376230 PPIP5K2O43314 1243 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 SEC23AQ15436 765 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 DNAAF5Q86Y56 855 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 GPR161Q8N6U8 529 aaKnown RBP11.23□□□□□ -0.61
ZNF550-203ENST00000376230 RASSF4Q9H2L5 321 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 IL17RBQ9NRM6 502 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 HDAC6Q9UBN7 1215 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
ZNF550-203ENST00000376230 CTAGE9A4FU28 777 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 SPDYE3A6NKU9 549 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 EIF3JO75822 258 aaKnown RBP11.23□□□□□ -0.61
ZNF550-203ENST00000376230 BMP15O95972 392 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 TRIM65Q6PJ69 517 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 CCDC155Q8N6L0 562 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 GJD4Q96KN9 370 aaPredicted RBP11.23□□□□□ -0.61
ZNF550-203ENST00000376230 RAB34Q9BZG1 259 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 PSTPIP2Q9H939 334 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 RMND1Q9NWS8 449 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 SERPINB13Q9UIV8 391 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 GJA3Q9Y6H8 435 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 PNPLA7Q6ZV29 1317 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 NPHP3-ACAD11A0A0J9YXS1 232 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 DDAH1O94760 285 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 TBC1D8O95759 1140 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 SEPT2Q15019 361 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 PFKFB3Q16875 520 aaPredicted RBP11.23□□□□□ -0.61
ZNF550-203ENST00000376230 KRT26Q7Z3Y9 468 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 TEKT1Q969V4 418 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 PCDHB13Q9Y5F0 798 aa11.23□□□□□ -0.61
ZNF550-203ENST00000376230 PHLPP2Q6ZVD8 1323 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 SPAG5Q96R06 1193 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 PHF20Q9BVI0 1012 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 LCMT1Q9UIC8 334 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 RFX7Q2KHR2 1363 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 FAM208AQ9UK61 1670 aaKnown RBP11.22□□□□□ -0.61
ZNF550-203ENST00000376230 CTAGE15A4D2H0 777 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 CTAGE8P0CG41 777 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 AMPD3Q01432 767 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 CTAGE6Q86UF2 777 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 CTAGE4Q8IX94 777 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 PCDHA12Q9UN75 941 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 IKBKBO14920 756 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 ACTN4O43707 911 aaKnown RBP11.22□□□□□ -0.61
ZNF550-203ENST00000376230 RASA1P20936 1047 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 AOC3Q16853 763 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 CERKLQ49MI3 558 aaPredicted RBP11.22□□□□□ -0.61
ZNF550-203ENST00000376230 KRT27Q7Z3Y8 459 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 TPH2Q8IWU9 490 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 TBC1D16Q8TBP0 767 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 CTAGE1Q96RT6 745 aa11.22□□□□□ -0.61
ZNF550-203ENST00000376230 XRN1Q8IZH2 1706 aaKnown RBP11.22□□□□□ -0.61
ZNF550-203ENST00000376230 CNTNAP5Q8WYK1 1306 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 E9PMD0 336 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 FANCGO15287 622 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 PLCG2P16885 1265 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 ATP2B4P23634 1241 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 DPYDQ12882 1025 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 TTC19Q6DKK2 380 aaPredicted RBP11.21□□□□□ -0.61
ZNF550-203ENST00000376230 LARGE2Q8N3Y3 721 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 OGFOD1Q8N543 542 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 TSG101Q99816 390 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 TUBGCP2Q9BSJ2 902 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 FAM107BQ9H098 131 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 ABCB6Q9NP58 842 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 LEMD3Q9Y2U8 911 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 MYO1CO00159 1063 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 CLIC2O15247 247 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 SLFN13Q68D06 897 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 ADAT2Q7Z6V5 191 aaKnown RBP11.21□□□□□ -0.61
ZNF550-203ENST00000376230 ZFPM1Q8IX07 1006 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 SYCP3Q8IZU3 236 aa11.21□□□□□ -0.61
ZNF550-203ENST00000376230 PROCA1Q8NCQ7 364 aaPredicted RBP11.21□□□□□ -0.61
ZNF550-203ENST00000376230 ENOX1Q8TC92 643 aaKnown RBP11.21□□□□□ -0.61
ZNF550-203ENST00000376230 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.21□□□□□ -0.61
ZNF550-203ENST00000376230 GOLGA6L9A6NEM1 432 aa11.21□□□□□ -0.62
ZNF550-203ENST00000376230 CYTH3O43739 400 aa11.21□□□□□ -0.62
ZNF550-203ENST00000376230 GTPBP6O43824 516 aaPredicted RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms