RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 A0A1W2PQD8 194 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 hCG_1642624A0A1W2PR95 340 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 GOLGA6L3A6NEY3 463 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 PPP6R2O75170 966 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 BCRP11274 1271 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 CTGFP29279 349 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 CEBPZQ03701 1054 aaKnown RBP24.25■■□□□ 1.47
HLA-C-201ENST00000376228 STK38Q15208 465 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 GPATCH4Q5T3I0 446 aaKnown RBP24.25■■□□□ 1.47
HLA-C-201ENST00000376228 FBXO46Q6PJ61 603 aaPredicted RBP24.25■■□□□ 1.47
HLA-C-201ENST00000376228 ASCC2Q9H1I8 757 aaPredicted RBP24.25■■□□□ 1.47
HLA-C-201ENST00000376228 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.25■■□□□ 1.47
HLA-C-201ENST00000376228 PNMA3Q9UL41 463 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 hCG_1984214I3L0E3 225 aa24.24■■□□□ 1.47
HLA-C-201ENST00000376228 SPTLC2O15270 562 aa24.24■■□□□ 1.47
HLA-C-201ENST00000376228 ZNF543Q08ER8 600 aa24.24■■□□□ 1.47
HLA-C-201ENST00000376228 LRRC47Q8N1G4 583 aaKnown RBP24.24■■□□□ 1.47
HLA-C-201ENST00000376228 ZNF713Q8N859 430 aaPredicted RBP24.24■■□□□ 1.47
HLA-C-201ENST00000376228 TNFRSF25Q93038 417 aa24.24■■□□□ 1.47
HLA-C-201ENST00000376228 OSBPP22059 807 aa24.23■■□□□ 1.47
HLA-C-201ENST00000376228 PABPC4Q13310 644 aaKnown RBP eCLIP24.23■■□□□ 1.47
HLA-C-201ENST00000376228 KIF22Q14807 665 aa24.23■■□□□ 1.47
HLA-C-201ENST00000376228 PTPAQ15257 358 aa24.23■■□□□ 1.47
HLA-C-201ENST00000376228 L1TD1Q5T7N2 865 aaKnown RBP24.23■■□□□ 1.47
HLA-C-201ENST00000376228 ANKRD13CQ8N6S4 541 aa24.23■■□□□ 1.47
HLA-C-201ENST00000376228 DAGLBQ8NCG7 672 aa24.23■■□□□ 1.47
HLA-C-201ENST00000376228 CCDC148Q8NFR7 591 aa24.23■■□□□ 1.47
HLA-C-201ENST00000376228 OXER1Q8TDS5 423 aa24.23■■□□□ 1.47
HLA-C-201ENST00000376228 DDX19AQ9NUU7 478 aaKnown RBP24.23■■□□□ 1.47
HLA-C-201ENST00000376228 BARHL2Q9NY43 387 aa24.23■■□□□ 1.47
HLA-C-201ENST00000376228 A0A1W2PRG0 241 aa24.22■■□□□ 1.47
HLA-C-201ENST00000376228 GOLGA8HP0CJ92 632 aa24.22■■□□□ 1.47
HLA-C-201ENST00000376228 EEF2P13639 858 aaKnown RBP24.22■■□□□ 1.47
HLA-C-201ENST00000376228 NR5A1Q13285 461 aa24.22■■□□□ 1.47
HLA-C-201ENST00000376228 SF3A1Q15459 793 aaKnown RBP24.22■■□□□ 1.47
HLA-C-201ENST00000376228 LRSAM1Q6UWE0 723 aa24.22■■□□□ 1.47
HLA-C-201ENST00000376228 SIAH1Q8IUQ4 282 aa24.22■■□□□ 1.47
HLA-C-201ENST00000376228 DCAF4Q8WV16 495 aa24.22■■□□□ 1.47
HLA-C-201ENST00000376228 RRP36Q96EU6 259 aaKnown RBP24.22■■□□□ 1.47
HLA-C-201ENST00000376228 PCDHA7Q9UN72 937 aa24.22■■□□□ 1.47
HLA-C-201ENST00000376228 PTPN22Q9Y2R2 807 aa24.22■■□□□ 1.47
HLA-C-201ENST00000376228 LIG1P18858 919 aa24.21■■□□□ 1.47
HLA-C-201ENST00000376228 PSMC4P43686 418 aa24.21■■□□□ 1.47
HLA-C-201ENST00000376228 ME1P48163 572 aa24.21■■□□□ 1.47
HLA-C-201ENST00000376228 TOB1P50616 345 aaPredicted RBP24.21■■□□□ 1.47
HLA-C-201ENST00000376228 IRX3P78415 501 aaPredicted RBP24.21■■□□□ 1.47
HLA-C-201ENST00000376228 ICA1Q05084 483 aa24.21■■□□□ 1.47
HLA-C-201ENST00000376228 GMCL1P1Q8NEA9 526 aa24.21■■□□□ 1.47
HLA-C-201ENST00000376228 KIAA1683Q9H0B3 1180 aa24.21■■□□□ 1.47
HLA-C-201ENST00000376228 NLRP5P59047 1200 aa24.2■■□□□ 1.47
HLA-C-201ENST00000376228 GAS2L3Q86XJ1 694 aa24.2■■□□□ 1.47
HLA-C-201ENST00000376228 BICD2Q8TD16 824 aa24.2■■□□□ 1.47
HLA-C-201ENST00000376228 CCDC12Q8WUD4 166 aaPredicted RBP24.2■■□□□ 1.47
HLA-C-201ENST00000376228 TRIM47Q96LD4 638 aa24.2■■□□□ 1.47
HLA-C-201ENST00000376228 MTMR7Q9Y216 660 aa24.2■■□□□ 1.47
HLA-C-201ENST00000376228 BRCA2P51587 3418 aa24.2■■□□□ 1.46
HLA-C-201ENST00000376228 STXBP3O00186 592 aa24.2■■□□□ 1.46
HLA-C-201ENST00000376228 PEX10O60683 326 aa24.2■■□□□ 1.46
HLA-C-201ENST00000376228 HOXA7P31268 230 aaPredicted RBP24.2■■□□□ 1.46
HLA-C-201ENST00000376228 USP14P54578 494 aa24.2■■□□□ 1.46
HLA-C-201ENST00000376228 WWC2Q6AWC2 1192 aa24.2■■□□□ 1.46
HLA-C-201ENST00000376228 RASGRP2Q7LDG7 609 aa24.2■■□□□ 1.46
HLA-C-201ENST00000376228 C12orf42Q96LP6 360 aa24.2■■□□□ 1.46
HLA-C-201ENST00000376228 PCDHA4Q9UN74 947 aa24.2■■□□□ 1.46
HLA-C-201ENST00000376228 VCAM1P19320 739 aa24.19■■□□□ 1.46
HLA-C-201ENST00000376228 TRAPPC10P48553 1259 aa24.19■■□□□ 1.46
HLA-C-201ENST00000376228 MRE11P49959 708 aa24.19■■□□□ 1.46
HLA-C-201ENST00000376228 ATP2B2Q01814 1243 aa24.19■■□□□ 1.46
HLA-C-201ENST00000376228 ARHGEF6Q15052 776 aa24.19■■□□□ 1.46
HLA-C-201ENST00000376228 AXDND1Q5T1B0 1012 aaPredicted RBP24.19■■□□□ 1.46
HLA-C-201ENST00000376228 P2RX7Q99572 595 aaKnown RBP24.19■■□□□ 1.46
HLA-C-201ENST00000376228 SEC63Q9UGP8 760 aaKnown RBP24.19■■□□□ 1.46
HLA-C-201ENST00000376228 CEP131Q9UPN4 1083 aa24.19■■□□□ 1.46
HLA-C-201ENST00000376228 ESYT2A0FGR8 921 aa24.18■■□□□ 1.46
HLA-C-201ENST00000376228 SYCE3A1L190 88 aa24.18■■□□□ 1.46
HLA-C-201ENST00000376228 M0R2N6 131 aa24.18■■□□□ 1.46
HLA-C-201ENST00000376228 CCAR1Q8IX12 1150 aaKnown RBP24.18■■□□□ 1.46
HLA-C-201ENST00000376228 BLIDQ8IZY5 108 aa24.18■■□□□ 1.46
HLA-C-201ENST00000376228 MTMR8Q96EF0 704 aa24.18■■□□□ 1.46
HLA-C-201ENST00000376228 GMCL1Q96IK5 515 aa24.18■■□□□ 1.46
HLA-C-201ENST00000376228 ZMYND12Q9H0C1 365 aa24.18■■□□□ 1.46
HLA-C-201ENST00000376228 NOL7Q9UMY1 257 aaKnown RBP24.18■■□□□ 1.46
HLA-C-201ENST00000376228 PTCH2Q9Y6C5 1203 aa24.18■■□□□ 1.46
HLA-C-201ENST00000376228 DOCK3Q8IZD9 2030 aa24.17■■□□□ 1.46
HLA-C-201ENST00000376228 BMP15O95972 392 aa24.17■■□□□ 1.46
HLA-C-201ENST00000376228 KIAA1755Q5JYT7 1200 aa24.17■■□□□ 1.46
HLA-C-201ENST00000376228 ENGASEQ8NFI3 743 aa24.17■■□□□ 1.46
HLA-C-201ENST00000376228 ARHGEF10LQ9HCE6 1279 aa24.17■■□□□ 1.46
HLA-C-201ENST00000376228 DACT1Q9NYF0 836 aa24.17■■□□□ 1.46
HLA-C-201ENST00000376228 CMA1P23946 247 aa24.16■■□□□ 1.46
HLA-C-201ENST00000376228 HERVK_113P62684 666 aa24.16■■□□□ 1.46
HLA-C-201ENST00000376228 FAM160A1Q05DH4 1040 aa24.16■■□□□ 1.46
HLA-C-201ENST00000376228 SLFN13Q68D06 897 aa24.16■■□□□ 1.46
HLA-C-201ENST00000376228 TYW1BQ6NUM6 668 aa24.16■■□□□ 1.46
HLA-C-201ENST00000376228 CCDC73Q6ZRK6 1079 aa24.16■■□□□ 1.46
HLA-C-201ENST00000376228 RBM43Q6ZSC3 357 aaKnown RBP24.16■■□□□ 1.46
HLA-C-201ENST00000376228 MRPS27Q92552 414 aaKnown RBP24.16■■□□□ 1.46
HLA-C-201ENST00000376228 GPKOWQ92917 476 aaPredicted RBP eCLIP24.16■■□□□ 1.46
HLA-C-201ENST00000376228 UBA5Q9GZZ9 404 aa24.16■■□□□ 1.46
HLA-C-201ENST00000376228 FRMPD2Q68DX3 1309 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms