RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 ZNF467Q7Z7K2 595 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-201ENST00000376177 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
DDX39B-201ENST00000376177 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
DDX39B-201ENST00000376177 RPUSD2Q8IZ73 545 aaKnown RBP13.11□□□□□ -0.31
DDX39B-201ENST00000376177 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.11□□□□□ -0.31
DDX39B-201ENST00000376177 TEX13BQ9BXU2 312 aa13.11□□□□□ -0.31
DDX39B-201ENST00000376177 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
DDX39B-201ENST00000376177 C1orf115Q9H7X2 142 aa13.11□□□□□ -0.31
DDX39B-201ENST00000376177 RAVER2Q9HCJ3 691 aaKnown RBP13.11□□□□□ -0.31
DDX39B-201ENST00000376177 PDGFCQ9NRA1 345 aa13.11□□□□□ -0.31
DDX39B-201ENST00000376177 SURF6O75683 361 aaKnown RBP13.1□□□□□ -0.31
DDX39B-201ENST00000376177 CDK8P49336 464 aa13.1□□□□□ -0.31
DDX39B-201ENST00000376177 TNFAIP2Q03169 654 aa13.1□□□□□ -0.31
DDX39B-201ENST00000376177 NFKBIBQ15653 356 aa13.1□□□□□ -0.31
DDX39B-201ENST00000376177 FSCN1Q16658 493 aaKnown RBP13.1□□□□□ -0.31
DDX39B-201ENST00000376177 TLK2Q86UE8 772 aa13.1□□□□□ -0.31
DDX39B-201ENST00000376177 GJD3Q8N144 294 aa13.1□□□□□ -0.31
DDX39B-201ENST00000376177 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.1□□□□□ -0.31
DDX39B-201ENST00000376177 SLF1Q9BQI6 1058 aa13.1□□□□□ -0.31
DDX39B-201ENST00000376177 CRNKL1Q9BZJ0 848 aaKnown RBP13.1□□□□□ -0.31
DDX39B-201ENST00000376177 ARMT1Q9H993 441 aa13.1□□□□□ -0.31
DDX39B-201ENST00000376177 ZNF532Q9HCE3 1301 aa13.1□□□□□ -0.31
DDX39B-201ENST00000376177 ATG2AQ2TAZ0 1938 aa13.1□□□□□ -0.31
DDX39B-201ENST00000376177 TCRBV5S4A2TA0A5A2 114 aa13.09□□□□□ -0.31
DDX39B-201ENST00000376177 DYNC1LI2O43237 492 aaPredicted RBP13.09□□□□□ -0.31
DDX39B-201ENST00000376177 IGSF3O75054 1194 aa13.09□□□□□ -0.31
DDX39B-201ENST00000376177 SMPD1P17405 629 aa13.09□□□□□ -0.31
DDX39B-201ENST00000376177 COPB2P35606 906 aa13.09□□□□□ -0.31
DDX39B-201ENST00000376177 C20orf194Q5TEA3 1177 aa13.09□□□□□ -0.31
DDX39B-201ENST00000376177 HERC6Q8IVU3 1022 aa13.09□□□□□ -0.31
DDX39B-201ENST00000376177 ANKRD35Q8N283 1001 aa13.09□□□□□ -0.31
DDX39B-201ENST00000376177 ALDH8A1Q9H2A2 487 aaPredicted RBP13.09□□□□□ -0.31
DDX39B-201ENST00000376177 SWAP70Q9UH65 585 aa13.09□□□□□ -0.31
DDX39B-201ENST00000376177 MYH7P12883 1935 aa13.09□□□□□ -0.31
DDX39B-201ENST00000376177 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.31
DDX39B-201ENST00000376177 RARSP54136 660 aaKnown RBP13.08□□□□□ -0.31
DDX39B-201ENST00000376177 SLC9C2Q5TAH2 1124 aa13.08□□□□□ -0.31
DDX39B-201ENST00000376177 SSH3Q8TE77 659 aa13.08□□□□□ -0.31
DDX39B-201ENST00000376177 CLUAP1Q96AJ1 413 aa13.08□□□□□ -0.31
DDX39B-201ENST00000376177 UBE2ZQ9H832 354 aaPredicted RBP13.08□□□□□ -0.31
DDX39B-201ENST00000376177 UPF2Q9HAU5 1272 aaKnown RBP13.08□□□□□ -0.31
DDX39B-201ENST00000376177 HOMER2Q9NSB8 354 aa13.08□□□□□ -0.31
DDX39B-201ENST00000376177 MTUS1Q9ULD2 1270 aa13.08□□□□□ -0.31
DDX39B-201ENST00000376177 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.08□□□□□ -0.32
DDX39B-201ENST00000376177 SOWAHBA6NEL2 793 aa13.08□□□□□ -0.32
DDX39B-201ENST00000376177 TRIM27P14373 513 aa13.08□□□□□ -0.32
DDX39B-201ENST00000376177 EEPD1Q7L9B9 569 aa13.08□□□□□ -0.32
DDX39B-201ENST00000376177 SLC9A7Q96T83 725 aa13.08□□□□□ -0.32
DDX39B-201ENST00000376177 GOPCQ9HD26 462 aa13.08□□□□□ -0.32
DDX39B-201ENST00000376177 NDUFB10O96000 172 aa13.07□□□□□ -0.32
DDX39B-201ENST00000376177 KCNA5P22460 613 aa13.07□□□□□ -0.32
DDX39B-201ENST00000376177 C12orf60Q5U649 245 aa13.07□□□□□ -0.32
DDX39B-201ENST00000376177 STK11IPQ8N1F8 1099 aa13.07□□□□□ -0.32
DDX39B-201ENST00000376177 PURBQ96QR8 312 aaKnown RBP13.07□□□□□ -0.32
DDX39B-201ENST00000376177 SCN10AQ9Y5Y9 1956 aa13.07□□□□□ -0.32
DDX39B-201ENST00000376177 TNKSO95271 1327 aa13.07□□□□□ -0.32
DDX39B-201ENST00000376177 USP17L12C9JPN9 530 aa13.06□□□□□ -0.32
DDX39B-201ENST00000376177 USP17L21D6R901 530 aa13.06□□□□□ -0.32
DDX39B-201ENST00000376177 CABYRO75952 493 aa13.06□□□□□ -0.32
DDX39B-201ENST00000376177 ATP8B2P98198 1209 aa13.06□□□□□ -0.32
DDX39B-201ENST00000376177 CSPP1Q1MSJ5 1256 aa13.06□□□□□ -0.32
DDX39B-201ENST00000376177 TCTN1Q2MV58 587 aa13.06□□□□□ -0.32
DDX39B-201ENST00000376177 C16orf86Q6ZW13 317 aa13.06□□□□□ -0.32
DDX39B-201ENST00000376177 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.06□□□□□ -0.32
DDX39B-201ENST00000376177 FBXO16Q8IX29 292 aaPredicted RBP13.06□□□□□ -0.32
DDX39B-201ENST00000376177 FAM133AQ8N9E0 248 aa13.06□□□□□ -0.32
DDX39B-201ENST00000376177 KIFC2Q96AC6 838 aa13.06□□□□□ -0.32
DDX39B-201ENST00000376177 KANSL2Q9H9L4 492 aa13.06□□□□□ -0.32
DDX39B-201ENST00000376177 SUGCTQ9HAC7 445 aa13.06□□□□□ -0.32
DDX39B-201ENST00000376177 F5H6K3 240 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 MBD4O95243 580 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 PFKMP08237 780 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 DEFB103AP81534 67 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 KLRC3Q07444 240 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 LEXMQ3ZCV2 418 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 PTCRAQ6ISU1 281 aaPredicted RBP13.05□□□□□ -0.32
DDX39B-201ENST00000376177 TAPT1Q6NXT6 567 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 HFE2Q6ZVN8 426 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 ARHGAP45Q92619 1136 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 CHMP4CQ96CF2 233 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 CCDC17Q96LX7 622 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 AP5M1Q9H0R1 490 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 SLC38A10Q9HBR0 1119 aa13.05□□□□□ -0.32
DDX39B-201ENST00000376177 GOLIM4O00461 696 aa13.04□□□□□ -0.32
DDX39B-201ENST00000376177 ATP2A1O14983 1001 aa13.04□□□□□ -0.32
DDX39B-201ENST00000376177 IQCF3P0C7M6 154 aa13.04□□□□□ -0.32
DDX39B-201ENST00000376177 GPNMBQ14956 572 aa13.04□□□□□ -0.32
DDX39B-201ENST00000376177 AACSQ86V21 672 aa13.04□□□□□ -0.32
DDX39B-201ENST00000376177 TMEM57Q8N5G2 664 aa13.04□□□□□ -0.32
DDX39B-201ENST00000376177 PRPF38AQ8NAV1 312 aaKnown RBP13.04□□□□□ -0.32
DDX39B-201ENST00000376177 PHOSPHO2Q8TCD6 241 aa13.04□□□□□ -0.32
DDX39B-201ENST00000376177 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX39B-201ENST00000376177 FTOQ9C0B1 505 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX39B-201ENST00000376177 A1CFQ9NQ94 594 aaKnown RBP13.04□□□□□ -0.32
DDX39B-201ENST00000376177 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
DDX39B-201ENST00000376177 GRXCR2A6NFK2 248 aa13.03□□□□□ -0.32
DDX39B-201ENST00000376177 H3BQ06 376 aaPredicted RBP13.03□□□□□ -0.32
DDX39B-201ENST00000376177 ZBED4O75132 1171 aa13.03□□□□□ -0.32
DDX39B-201ENST00000376177 ACTN1P12814 892 aa13.03□□□□□ -0.32
DDX39B-201ENST00000376177 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms