RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
PDPN-202ENST00000376057 TYRO3Q06418 890 aa12.65□□□□□ -0.38
PDPN-202ENST00000376057 SEMA3FQ13275 785 aa12.65□□□□□ -0.38
PDPN-202ENST00000376057 FAM83BQ5T0W9 1011 aa12.65□□□□□ -0.38
PDPN-202ENST00000376057 NT5DC1Q5TFE4 455 aa12.65□□□□□ -0.38
PDPN-202ENST00000376057 KRBA2Q6ZNG9 492 aa12.65□□□□□ -0.38
PDPN-202ENST00000376057 KIAA1468Q9P260 1216 aa12.65□□□□□ -0.38
PDPN-202ENST00000376057 RBBP6Q7Z6E9 1792 aaKnown RBP12.64□□□□□ -0.39
PDPN-202ENST00000376057 ABCB11O95342 1321 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 GLTPD2A6NH11 291 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 PTPRAP18433 802 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 INF2Q27J81 1249 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 SH3D19Q5HYK7 790 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 SASS6Q6UVJ0 657 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.64□□□□□ -0.39
PDPN-202ENST00000376057 TBCKQ8TEA7 893 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 DCPSQ96C86 337 aaKnown RBP12.64□□□□□ -0.39
PDPN-202ENST00000376057 MRVI1Q9Y6F6 885 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 MEIS2O14770 477 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 PRPF38AQ8NAV1 312 aaKnown RBP12.64□□□□□ -0.39
PDPN-202ENST00000376057 RASGRP4Q8TDF6 673 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 CCDC34Q96HJ3 373 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 MTMR9Q96QG7 549 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 NUP88Q99567 741 aaPredicted RBP12.64□□□□□ -0.39
PDPN-202ENST00000376057 BPIFA3Q9BQP9 254 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 CCSER1Q9C0I3 900 aa12.64□□□□□ -0.39
PDPN-202ENST00000376057 EDIL3O43854 480 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 CYP3A4P08684 503 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 BACE1P56817 501 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 IL17AQ16552 155 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 CAMK4Q16566 473 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 ZNF280CQ8ND82 737 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 PICK1Q9NRD5 415 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 BIN2Q9UBW5 565 aaPredicted RBP12.63□□□□□ -0.39
PDPN-202ENST00000376057 USP2O75604 605 aaPredicted RBP12.63□□□□□ -0.39
PDPN-202ENST00000376057 MCM7P33993 719 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDPN-202ENST00000376057 PDIA5Q14554 519 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 STX1AQ16623 288 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 DTHD1Q6ZMT9 781 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 SH3RF1Q7Z6J0 888 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 SPATA20Q8TB22 786 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 SDF4Q9BRK5 362 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 MRPL11Q9Y3B7 192 aaKnown RBP12.63□□□□□ -0.39
PDPN-202ENST00000376057 OTOFQ9HC10 1997 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 LOC285556D6RIA3 1793 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 RLFQ13129 1914 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 MYPNQ86TC9 1320 aa12.63□□□□□ -0.39
PDPN-202ENST00000376057 ACTN4O43707 911 aaKnown RBP12.62□□□□□ -0.39
PDPN-202ENST00000376057 ICAM1P05362 532 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 OR52Z1P0C646 297 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 GRIN1Q05586 938 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 CT47A1Q5JQC4 288 aaPredicted RBP12.62□□□□□ -0.39
PDPN-202ENST00000376057 RBM46Q8TBY0 533 aaKnown RBP12.62□□□□□ -0.39
PDPN-202ENST00000376057 FAM200AQ8TCP9 573 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 SLF1Q9BQI6 1058 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 EMILIN3Q9NT22 766 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 ANO10Q9NW15 660 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 ADAMTS5Q9UNA0 930 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 IQCA1LA6NCM1 817 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 OPLAHO14841 1288 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 NEMFO60524 1076 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 SLFN14P0C7P3 912 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 INPP5BP32019 993 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 CIITAP33076 1130 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 OAZ1P54368 228 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 WRNIP1Q96S55 665 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 GLIS2Q9BZE0 524 aaPredicted RBP12.62□□□□□ -0.39
PDPN-202ENST00000376057 CUEDC2Q9H467 287 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 MAGEF1Q9HAY2 307 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 RABGAP1Q9Y3P9 1069 aa12.62□□□□□ -0.39
PDPN-202ENST00000376057 POLR2AP24928 1970 aaKnown RBP12.62□□□□□ -0.39
PDPN-202ENST00000376057 MYH7BA7E2Y1 1941 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 TBX3O15119 743 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 MYL1P05976 194 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 SREBF1P36956 1147 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 SARSP49591 514 aaKnown RBP12.61□□□□□ -0.39
PDPN-202ENST00000376057 E2F4Q16254 413 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 LONRF3Q496Y0 759 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 JAKMIP3Q5VZ66 844 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 SULF1Q8IWU6 871 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 IGSF22Q8N9C0 903 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 TRIML1Q8N9V2 468 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 TMEM260Q9NX78 707 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 CCNT1O60563 726 aaKnown RBP12.61□□□□□ -0.39
PDPN-202ENST00000376057 ATP2B1P20020 1258 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 MAP3K9P80192 1104 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 Q4G0T1 1027 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 PNMA8AQ86V59 439 aaPredicted RBP12.61□□□□□ -0.39
PDPN-202ENST00000376057 SPICE1Q8N0Z3 855 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 SYMPKQ92797 1274 aaKnown RBP12.61□□□□□ -0.39
PDPN-202ENST00000376057 FEZ1Q99689 392 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 SLC38A10Q9HBR0 1119 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 ATP2A1O14983 1001 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 EPHX2P34913 555 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 IKQ13123 557 aaPredicted RBP12.61□□□□□ -0.39
PDPN-202ENST00000376057 CKAP2LQ8IYA6 745 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 CNNM3Q8NE01 707 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 320.7 ms