RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 IL6STP40189 918 aaPredicted RBP18.55■□□□□ 0.56
VARS-215ENST00000375663 SLC1A4P43007 532 aa18.55■□□□□ 0.56
VARS-215ENST00000375663 ZBTB16Q05516 673 aa18.55■□□□□ 0.56
VARS-215ENST00000375663 CUL4BQ13620 913 aa18.55■□□□□ 0.56
VARS-215ENST00000375663 MB21D1Q8N884 522 aa18.55■□□□□ 0.56
VARS-215ENST00000375663 MRPL44Q9H9J2 332 aaKnown RBP18.55■□□□□ 0.56
VARS-215ENST00000375663 AMFRQ9UKV5 643 aa18.55■□□□□ 0.56
VARS-215ENST00000375663 A0A1B0GUA9 196 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 LAD1O00515 517 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 HEXIM1O94992 359 aaKnown RBP18.54■□□□□ 0.56
VARS-215ENST00000375663 APBA1Q02410 837 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 CNBD1Q8NA66 436 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 EPB41L5Q9HCM4 733 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 ADGRB2O60241 1585 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 STAT1P42224 750 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 SETDB1Q15047 1291 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 RBM43Q6ZSC3 357 aaKnown RBP18.54■□□□□ 0.56
VARS-215ENST00000375663 EFCAB13Q8IY85 973 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 STAG1Q8WVM7 1258 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 AK8Q96MA6 479 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 THAP9Q9H5L6 903 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 HGSO14964 777 aaPredicted RBP18.54■□□□□ 0.56
VARS-215ENST00000375663 MYL1P05976 194 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 LACTBP83111 547 aaPredicted RBP18.54■□□□□ 0.56
VARS-215ENST00000375663 MAN2A1Q16706 1144 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 SGMS1Q86VZ5 419 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 CARD10Q9BWT7 1032 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 ZBTB21Q9ULJ3 1066 aa18.54■□□□□ 0.56
VARS-215ENST00000375663 ABCB4P21439 1286 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 MAP3K9P80192 1104 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 SPATS2Q86XZ4 545 aaKnown RBP18.53■□□□□ 0.56
VARS-215ENST00000375663 CACNA2D3Q8IZS8 1091 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 RAB17Q9H0T7 212 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.53■□□□□ 0.56
VARS-215ENST00000375663 TUBE1Q9UJT0 475 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 H2AFZP0C0S5 128 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 EIF4A3P38919 411 aaKnown RBP18.53■□□□□ 0.56
VARS-215ENST00000375663 H2AFVQ71UI9 128 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 PANK4Q9NVE7 773 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 A0A087WUV0 522 aaPredicted RBP18.53■□□□□ 0.56
VARS-215ENST00000375663 MOCS3O95396 460 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 ARL6IP4Q66PJ3 421 aaKnown RBP18.53■□□□□ 0.56
VARS-215ENST00000375663 CROCCP2Q86T23 111 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 LARP4BQ92615 738 aaKnown RBP18.53■□□□□ 0.56
VARS-215ENST00000375663 DPH5Q9H2P9 285 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 HOMER2Q9NSB8 354 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 SRGAP2O75044 1071 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 MAP2K2P36507 400 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 ADAM9Q13443 819 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 IFT74Q96LB3 600 aa18.53■□□□□ 0.56
VARS-215ENST00000375663 WDR17Q8IZU2 1322 aa18.52■□□□□ 0.56
VARS-215ENST00000375663 C6orf163Q5TEZ5 329 aa18.52■□□□□ 0.56
VARS-215ENST00000375663 MYCT1Q8N699 235 aa18.52■□□□□ 0.56
VARS-215ENST00000375663 IQCGQ9H095 443 aaKnown RBP18.52■□□□□ 0.56
VARS-215ENST00000375663 DISC1Q9NRI5 854 aa18.52■□□□□ 0.56
VARS-215ENST00000375663 FAM184BQ9ULE4 1060 aa18.52■□□□□ 0.56
VARS-215ENST00000375663 KDM3AQ9Y4C1 1321 aa18.52■□□□□ 0.56
VARS-215ENST00000375663 EXOC3O60645 756 aa18.52■□□□□ 0.56
VARS-215ENST00000375663 ATP5DP30049 168 aa18.52■□□□□ 0.56
VARS-215ENST00000375663 DENND2CQ68D51 928 aa18.52■□□□□ 0.56
VARS-215ENST00000375663 CDCA7Q9BWT1 371 aaPredicted RBP18.52■□□□□ 0.56
VARS-215ENST00000375663 ASIC3Q9UHC3 531 aa18.52■□□□□ 0.56
VARS-215ENST00000375663 BAIAP2L1Q9UHR4 511 aa18.52■□□□□ 0.56
VARS-215ENST00000375663 GGA1Q9UJY5 639 aa18.52■□□□□ 0.56
VARS-215ENST00000375663 A0A0G2JLW4 131 aa18.52■□□□□ 0.55
VARS-215ENST00000375663 SLC7A5Q01650 507 aa18.52■□□□□ 0.55
VARS-215ENST00000375663 ARHGAP44Q17R89 818 aa18.52■□□□□ 0.55
VARS-215ENST00000375663 CCDC105Q8IYK2 499 aa18.52■□□□□ 0.55
VARS-215ENST00000375663 NBPF26B4DH59 902 aa18.51■□□□□ 0.55
VARS-215ENST00000375663 LRRC41Q15345 812 aa18.51■□□□□ 0.55
VARS-215ENST00000375663 HLFQ16534 295 aa18.51■□□□□ 0.55
VARS-215ENST00000375663 NBPF10Q6P3W6 841 aaKnown RBP18.51■□□□□ 0.55
VARS-215ENST00000375663 INTS8Q75QN2 995 aaKnown RBP18.51■□□□□ 0.55
VARS-215ENST00000375663 NBPF15Q8N660 670 aa18.51■□□□□ 0.55
VARS-215ENST00000375663 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.51■□□□□ 0.55
VARS-215ENST00000375663 FRMPD2Q68DX3 1309 aaPredicted RBP18.51■□□□□ 0.55
VARS-215ENST00000375663 TRIM49BA6NDI0 452 aa18.51■□□□□ 0.55
VARS-215ENST00000375663 PLCG1P19174 1290 aa18.51■□□□□ 0.55
VARS-215ENST00000375663 MRPS25P82663 173 aaKnown RBP18.51■□□□□ 0.55
VARS-215ENST00000375663 FMR1Q06787 632 aaKnown RBP eCLIP18.51■□□□□ 0.559e-8■■■■□ 26.6
VARS-215ENST00000375663 CNKSR2Q8WXI2 1034 aa18.51■□□□□ 0.55
VARS-215ENST00000375663 PKD2L1Q9P0L9 805 aa18.51■□□□□ 0.55
VARS-215ENST00000375663 SLAIN2Q9P270 581 aa18.51■□□□□ 0.55
VARS-215ENST00000375663 LGALS16A8MUM7 142 aa18.51■□□□□ 0.55
VARS-215ENST00000375663 RGS16O15492 202 aaPredicted RBP18.51■□□□□ 0.55
VARS-215ENST00000375663 CYP2C19P33261 490 aa18.51■□□□□ 0.55
VARS-215ENST00000375663 FKBP3Q00688 224 aaKnown RBP18.51■□□□□ 0.55
VARS-215ENST00000375663 PTPRUQ92729 1446 aa18.51■□□□□ 0.55
VARS-215ENST00000375663 HMGB2P26583 209 aaKnown RBP18.5■□□□□ 0.55
VARS-215ENST00000375663 KIF11P52732 1056 aa18.5■□□□□ 0.55
VARS-215ENST00000375663 ALX1Q15699 326 aa18.5■□□□□ 0.55
VARS-215ENST00000375663 TAOK1Q7L7X3 1001 aa18.5■□□□□ 0.55
VARS-215ENST00000375663 SMCR8Q8TEV9 937 aaPredicted RBP18.5■□□□□ 0.55
VARS-215ENST00000375663 GUCY1A2P33402 732 aa18.5■□□□□ 0.55
VARS-215ENST00000375663 GKAP1Q5VSY0 366 aaPredicted RBP18.5■□□□□ 0.55
VARS-215ENST00000375663 TMTC3Q6ZXV5 915 aa18.5■□□□□ 0.55
VARS-215ENST00000375663 PRCPP42785 496 aa18.5■□□□□ 0.55
VARS-215ENST00000375663 ZNF365Q70YC5 407 aa18.5■□□□□ 0.55
VARS-215ENST00000375663 ADAT2Q7Z6V5 191 aaKnown RBP18.5■□□□□ 0.55
VARS-215ENST00000375663 LRRC47Q8N1G4 583 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms