RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 USH1GQ495M9 461 aa18.61■□□□□ 0.57
C11orf88-202ENST00000375618 MFSD14CQ5VZR4 134 aa18.61■□□□□ 0.57
C11orf88-202ENST00000375618 CCDC144CPQ8IYA2 1237 aa18.61■□□□□ 0.57
C11orf88-202ENST00000375618 FAM133AQ8N9E0 248 aa18.61■□□□□ 0.57
C11orf88-202ENST00000375618 RIOX1Q9H6W3 641 aa18.61■□□□□ 0.57
C11orf88-202ENST00000375618 HMX1Q9NP08 348 aaPredicted RBP18.61■□□□□ 0.57
C11orf88-202ENST00000375618 CYP39A1Q9NYL5 469 aa18.61■□□□□ 0.57
C11orf88-202ENST00000375618 DIS3Q9Y2L1 958 aaKnown RBP18.61■□□□□ 0.57
C11orf88-202ENST00000375618 SOWAHBA6NEL2 793 aa18.6■□□□□ 0.57
C11orf88-202ENST00000375618 CCDC69A6NI79 296 aa18.6■□□□□ 0.57
C11orf88-202ENST00000375618 DHX16O60231 1041 aaKnown RBP18.6■□□□□ 0.57
C11orf88-202ENST00000375618 NSMFQ6X4W1 530 aa18.6■□□□□ 0.57
C11orf88-202ENST00000375618 SLC30A10Q6XR72 485 aa18.6■□□□□ 0.57
C11orf88-202ENST00000375618 CMTR1Q8N1G2 835 aaKnown RBP18.6■□□□□ 0.57
C11orf88-202ENST00000375618 TMTC2Q8N394 836 aa18.6■□□□□ 0.57
C11orf88-202ENST00000375618 TBC1D5Q92609 795 aa18.6■□□□□ 0.57
C11orf88-202ENST00000375618 PIGSQ96S52 555 aa18.6■□□□□ 0.57
C11orf88-202ENST00000375618 MAP3K14Q99558 947 aa18.6■□□□□ 0.57
C11orf88-202ENST00000375618 CRISPLD2Q9H0B8 497 aa18.6■□□□□ 0.57
C11orf88-202ENST00000375618 SGPL1O95470 568 aa18.59■□□□□ 0.57
C11orf88-202ENST00000375618 SNAI1O95863 264 aaPredicted RBP18.59■□□□□ 0.57
C11orf88-202ENST00000375618 CASTP20810 708 aaKnown RBP18.59■□□□□ 0.57
C11orf88-202ENST00000375618 RPS6KB1P23443 525 aa18.59■□□□□ 0.57
C11orf88-202ENST00000375618 BAATQ14032 418 aaPredicted RBP18.59■□□□□ 0.57
C11orf88-202ENST00000375618 C8orf34Q49A92 452 aa18.59■□□□□ 0.57
C11orf88-202ENST00000375618 APOA5Q6Q788 366 aa18.59■□□□□ 0.57
C11orf88-202ENST00000375618 BLOC1S2Q6QNY1 142 aa18.59■□□□□ 0.57
C11orf88-202ENST00000375618 SRBD1Q8N5C6 995 aaKnown RBP18.59■□□□□ 0.57
C11orf88-202ENST00000375618 TINF2Q9BSI4 451 aa18.59■□□□□ 0.57
C11orf88-202ENST00000375618 SLC5A4Q9NY91 659 aa18.59■□□□□ 0.57
C11orf88-202ENST00000375618 POTEB2H3BUK9 544 aa18.58■□□□□ 0.56
C11orf88-202ENST00000375618 OPLAHO14841 1288 aa18.58■□□□□ 0.56
C11orf88-202ENST00000375618 HMGB1P09429 215 aaKnown RBP18.58■□□□□ 0.56
C11orf88-202ENST00000375618 LHX8Q68G74 356 aa18.58■□□□□ 0.56
C11orf88-202ENST00000375618 Q6ZUG5 572 aa18.58■□□□□ 0.56
C11orf88-202ENST00000375618 MICU3Q86XE3 530 aa18.58■□□□□ 0.56
C11orf88-202ENST00000375618 PIBF1Q8WXW3 757 aa18.58■□□□□ 0.56
C11orf88-202ENST00000375618 SLC12A7Q9Y666 1083 aa18.58■□□□□ 0.56
C11orf88-202ENST00000375618 ZBTB5O15062 677 aa18.57■□□□□ 0.56
C11orf88-202ENST00000375618 MNX1P50219 401 aaPredicted RBP18.57■□□□□ 0.56
C11orf88-202ENST00000375618 MAMDC4Q6UXC1 1216 aa18.57■□□□□ 0.56
C11orf88-202ENST00000375618 ZNF467Q7Z7K2 595 aaPredicted RBP18.57■□□□□ 0.56
C11orf88-202ENST00000375618 FBXO11Q86XK2 927 aa18.57■□□□□ 0.56
C11orf88-202ENST00000375618 HOMER1Q86YM7 354 aa18.57■□□□□ 0.56
C11orf88-202ENST00000375618 CTCFLQ8NI51 663 aaPredicted RBP18.57■□□□□ 0.56
C11orf88-202ENST00000375618 AGXT2Q9BYV1 514 aa18.57■□□□□ 0.56
C11orf88-202ENST00000375618 ZSWIM6Q9HCJ5 1215 aa18.57■□□□□ 0.56
C11orf88-202ENST00000375618 FAM217BQ9NTX9 383 aaPredicted RBP18.57■□□□□ 0.56
C11orf88-202ENST00000375618 BAZ2BQ9UIF8 2168 aaKnown RBP18.57■□□□□ 0.56
C11orf88-202ENST00000375618 PFASO15067 1338 aa18.56■□□□□ 0.56
C11orf88-202ENST00000375618 KLF18A0A0U1RQI7 1052 aa18.56■□□□□ 0.56
C11orf88-202ENST00000375618 ZNF865P0CJ78 1059 aaPredicted RBP18.56■□□□□ 0.56
C11orf88-202ENST00000375618 APOBRQ0VD83 1088 aa18.56■□□□□ 0.56
C11orf88-202ENST00000375618 ANO1Q5XXA6 986 aa18.56■□□□□ 0.56
C11orf88-202ENST00000375618 UBE2Q1Q7Z7E8 422 aa18.56■□□□□ 0.56
C11orf88-202ENST00000375618 FANCBQ8NB91 859 aa18.56■□□□□ 0.56
C11orf88-202ENST00000375618 BRF1Q92994 677 aa18.56■□□□□ 0.56
C11orf88-202ENST00000375618 SPZ1Q9BXG8 430 aa18.56■□□□□ 0.56
C11orf88-202ENST00000375618 UPF3BQ9BZI7 483 aaKnown RBP18.56■□□□□ 0.56
C11orf88-202ENST00000375618 KATNBL1Q9H079 304 aa18.56■□□□□ 0.56
C11orf88-202ENST00000375618 FRMPD3Q5JV73 1810 aa18.56■□□□□ 0.56
C11orf88-202ENST00000375618 ABCB11O95342 1321 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 LRRC37A2A6NM11 1700 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 PTPDC1A2A3K4 754 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 PSMA5P28066 241 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 CNGA1P29973 690 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 KIF5BP33176 963 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 RPS6P62753 249 aaKnown RBP18.55■□□□□ 0.56
C11orf88-202ENST00000375618 FUT2Q10981 343 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 TMTC3Q6ZXV5 915 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 RUFY3Q7L099 469 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 ARMCX2Q7L311 632 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 DIS3LQ8TF46 1054 aaKnown RBP18.55■□□□□ 0.56
C11orf88-202ENST00000375618 AMNQ9BXJ7 453 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.55■□□□□ 0.56
C11orf88-202ENST00000375618 COL20A1Q9P218 1284 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 DDX20Q9UHI6 824 aaKnown RBP18.55■□□□□ 0.56
C11orf88-202ENST00000375618 PNMA2Q9UL42 364 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 OGDHLQ9ULD0 1010 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 MCM3APO60318 1980 aa18.55■□□□□ 0.56
C11orf88-202ENST00000375618 MKI67P46013 3256 aaKnown RBP18.54■□□□□ 0.56
C11orf88-202ENST00000375618 SYNGAP1Q96PV0 1343 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 hCG_1642624A0A1W2PR95 340 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 ZBTB43O43298 467 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 TFRCP02786 760 aaKnown RBP18.54■□□□□ 0.56
C11orf88-202ENST00000375618 CALM1P0DP23 149 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 CALM2P0DP24 149 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 CALM3P0DP25 149 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 CALML3P27482 149 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 CDC27P30260 824 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 TOB2Q14106 344 aaPredicted RBP18.54■□□□□ 0.56
C11orf88-202ENST00000375618 RNF207Q6ZRF8 634 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 FBXL16Q8N461 479 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 CCDC82Q8N4S0 544 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 LENG1Q96BZ8 264 aaPredicted RBP18.54■□□□□ 0.56
C11orf88-202ENST00000375618 LARP6Q9BRS8 491 aaKnown RBP18.54■□□□□ 0.56
C11orf88-202ENST00000375618 TM6SF1Q9BZW5 370 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 PCDHA1Q9Y5I3 950 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 MYH6P13533 1939 aa18.54■□□□□ 0.56
C11orf88-202ENST00000375618 PNMA6FA0A0J9YX94 578 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms