RNA–Protein interactions for RNA: ENST00000375130.2

NCBP1-201, Transcript of nuclear cap binding protein subunit 1, humanhuman

TSL 3

Gene NCBP1, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-201ENST00000375130 SMARCC1Q92922 1105 aaPredicted RBP4.84□□□□□ -1.63
NCBP1-201ENST00000375130 RNF34Q969K3 372 aa4.84□□□□□ -1.63
NCBP1-201ENST00000375130 NECAB3Q96P71 396 aaPredicted RBP4.84□□□□□ -1.63
NCBP1-201ENST00000375130 ZC3H12CQ9C0D7 883 aaKnown RBP4.84□□□□□ -1.63
NCBP1-201ENST00000375130 SRCIN1Q9C0H9 1055 aa4.84□□□□□ -1.63
NCBP1-201ENST00000375130 LRRC27Q9C0I9 530 aa4.84□□□□□ -1.63
NCBP1-201ENST00000375130 OSBPL2Q9H1P3 480 aa4.84□□□□□ -1.63
NCBP1-201ENST00000375130 GGT7Q9UJ14 662 aa4.84□□□□□ -1.63
NCBP1-201ENST00000375130 COL14A1Q05707 1796 aaKnown RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 TRPM3Q9HCF6 1732 aaPredicted RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 YTHDC2Q9H6S0 1430 aaKnown RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 ANKRD30BQ9BXX2 1392 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 ADGRF5Q8IZF2 1346 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 FAM229AH3BQW9 127 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 TBX3O15119 743 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 NPHP1O15259 732 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 CTAGE5O15320 804 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 KIF5CO60282 957 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 IGHDP01880 384 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 NID1P14543 1247 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 PSMA3P25788 255 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 ZNF76P36508 570 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 TNNI2P48788 182 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 RGS3P49796 1198 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 GSTM4Q03013 218 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 WASHC5Q12768 1159 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 IKBKEQ14164 716 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 CCDC85BQ15834 202 aaPredicted RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 EZH2Q15910 746 aaKnown RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 RGL3Q3MIN7 710 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 FAM133BQ5BKY9 247 aaKnown RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 ZC3H12AQ5D1E8 599 aaKnown RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 ODR4Q5SWX8 454 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 C1QTNF12Q5T7M4 302 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 NDUFAF2Q8N183 169 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 NGDNQ8NEJ9 315 aaKnown RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 C22orf23Q9BZE7 217 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 TGIF2Q9GZN2 237 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 ALDH8A1Q9H2A2 487 aaPredicted RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 CLEC4MQ9H2X3 399 aaPredicted RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 ACBD3Q9H3P7 528 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 SRA1Q9HD15 236 aaKnown RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 ENAMQ9NRM1 1142 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 KCNK4Q9NYG8 393 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 GPN3Q9UHW5 284 aaPredicted RBP4.83□□□□□ -1.64
NCBP1-201ENST00000375130 PCDHB5Q9Y5E4 795 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 NUP188Q5SRE5 1749 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 IFT172Q9UG01 1749 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 CRYBG1Q9Y4K1 1723 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 ALS2Q96Q42 1657 aa4.83□□□□□ -1.64
NCBP1-201ENST00000375130 ANKARQ7Z5J8 1434 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 GOLGA6L22H0YM25 854 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 CHL1O00533 1208 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 PES1O00541 588 aaKnown RBP4.82□□□□□ -1.64
NCBP1-201ENST00000375130 TM4SF5O14894 197 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 FSCN2O14926 492 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 DEAF1O75398 565 aaPredicted RBP4.82□□□□□ -1.64
NCBP1-201ENST00000375130 RPN1P04843 607 aaKnown RBP4.82□□□□□ -1.64
NCBP1-201ENST00000375130 KRT18P05783 430 aaKnown RBP4.82□□□□□ -1.64
NCBP1-201ENST00000375130 CTSBP07858 339 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 ZNF132P52740 706 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 BRD3Q15059 726 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 TAF11Q15544 211 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 CCDC93Q567U6 631 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 FAM196AQ6ZSG2 479 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 WFDC8Q8IUA0 241 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 ACRBPQ8NEB7 543 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 ERP27Q96DN0 273 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 TRIM11Q96F44 468 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 IWS1Q96ST2 819 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 MAP7D2Q96T17 732 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 MPHOSPH6Q99547 160 aaKnown RBP4.82□□□□□ -1.64
NCBP1-201ENST00000375130 CCDC94Q9BW85 323 aaPredicted RBP4.82□□□□□ -1.64
NCBP1-201ENST00000375130 PLVAPQ9BX97 442 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 TMEM39AQ9NV64 488 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 KBTBD4Q9NVX7 518 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 BTG4Q9NY30 223 aa4.82□□□□□ -1.64
NCBP1-201ENST00000375130 UTP6Q9NYH9 597 aaKnown RBP4.82□□□□□ -1.64
NCBP1-201ENST00000375130 SPATA31A1Q5TZJ5 1347 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 TCEA3O75764 348 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 RNASEH2AO75792 299 aaKnown RBP4.81□□□□□ -1.64
NCBP1-201ENST00000375130 NBPF7P0C2Y1 421 aaPredicted RBP4.81□□□□□ -1.64
NCBP1-201ENST00000375130 RBP3P10745 1247 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 NAT1P18440 290 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 GBP2P32456 591 aaPredicted RBP4.81□□□□□ -1.64
NCBP1-201ENST00000375130 DGKGP49619 791 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 AMPD3Q01432 767 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 PTPN12Q05209 780 aaKnown RBP4.81□□□□□ -1.64
NCBP1-201ENST00000375130 PTPN11Q06124 597 aaPredicted RBP4.81□□□□□ -1.64
NCBP1-201ENST00000375130 PPP2R5AQ15172 486 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 PLEKHG4Q58EX7 1191 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 CCDC70Q6NSX1 233 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 PDXDC1Q6P996 788 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 RELL1Q8IUW5 271 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 KIAA1958Q8N8K9 716 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 PMFBP1Q8TBY8 1022 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 JARID2Q92833 1246 aaPredicted RBP4.81□□□□□ -1.64
NCBP1-201ENST00000375130 LGR6Q9HBX8 967 aa4.81□□□□□ -1.64
NCBP1-201ENST00000375130 CLIC5Q9NZA1 410 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms