RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 DAGLBQ8NCG7 672 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 HPS3Q969F9 1004 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 CLRN2A0PK11 232 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 MARCH6O60337 910 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 PPP1R11O60927 126 aaPredicted RBP20.59■□□□□ 0.89
RXRB-202ENST00000374685 ZNF543Q08ER8 600 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 DACT2Q5SW24 774 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 RIOX1Q9H6W3 641 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 SLC37A4O43826 429 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 EEF2P13639 858 aaKnown RBP20.59■□□□□ 0.89
RXRB-202ENST00000374685 PRCPP42785 496 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 ASPRV1Q53RT3 343 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 TAB2Q9NYJ8 693 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 FAM198AQ9UFP1 575 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 SCAF8Q9UPN6 1271 aaKnown RBP20.59■□□□□ 0.89
RXRB-202ENST00000374685 RAD17O75943 681 aa20.58■□□□□ 0.89
RXRB-202ENST00000374685 DESI2Q9BSY9 194 aa20.58■□□□□ 0.89
RXRB-202ENST00000374685 POTEMA6NI47 508 aa20.58■□□□□ 0.88
RXRB-202ENST00000374685 SLC1A4P43007 532 aa20.58■□□□□ 0.88
RXRB-202ENST00000374685 PAK1Q13153 545 aa20.58■□□□□ 0.88
RXRB-202ENST00000374685 SH3BP5LQ7L8J4 393 aa20.58■□□□□ 0.88
RXRB-202ENST00000374685 SPICE1Q8N0Z3 855 aa20.58■□□□□ 0.88
RXRB-202ENST00000374685 PLCD3Q8N3E9 789 aa20.58■□□□□ 0.88
RXRB-202ENST00000374685 SWAP70Q9UH65 585 aa20.58■□□□□ 0.88
RXRB-202ENST00000374685 COL11A2P13942 1736 aaPredicted RBP20.58■□□□□ 0.88
RXRB-202ENST00000374685 USP17L15C9J2P7 530 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 USP17L13C9JLJ4 530 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 USP17L11C9JVI0 530 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 USP17L18D6R9N7 530 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 USP17L22D6RA61 530 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 USP17L17D6RBQ6 530 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 USP17L19D6RCP7 530 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 USP17L20D6RJB6 530 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 USP17L24Q0WX57 530 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 USP17L6PQ6QN14 398 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 ZDHHC15Q96MV8 337 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 DDX41Q9UJV9 622 aaKnown RBP20.57■□□□□ 0.88
RXRB-202ENST00000374685 TCP10L2B9ZVM9 353 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 CALCRLQ16602 461 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 KMT5BQ4FZB7 885 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 STRIP1Q5VSL9 837 aa20.57■□□□□ 0.88
RXRB-202ENST00000374685 N4BP3O15049 544 aa20.56■□□□□ 0.88
RXRB-202ENST00000374685 NT5C2P49902 561 aa20.56■□□□□ 0.88
RXRB-202ENST00000374685 SLC15A2Q16348 729 aa20.56■□□□□ 0.88
RXRB-202ENST00000374685 PRMT6Q96LA8 375 aaPredicted RBP20.56■□□□□ 0.88
RXRB-202ENST00000374685 BAG1Q99933 345 aaPredicted RBP20.56■□□□□ 0.88
RXRB-202ENST00000374685 LTBP1Q14766 1721 aa20.56■□□□□ 0.88
RXRB-202ENST00000374685 SLX4Q8IY92 1834 aa20.56■□□□□ 0.88
RXRB-202ENST00000374685 ASIC1P78348 528 aa20.56■□□□□ 0.88
RXRB-202ENST00000374685 NCBP1Q09161 790 aaKnown RBP20.56■□□□□ 0.88
RXRB-202ENST00000374685 USH1GQ495M9 461 aa20.56■□□□□ 0.88
RXRB-202ENST00000374685 NYAP1Q6ZVC0 841 aa20.56■□□□□ 0.88
RXRB-202ENST00000374685 IGSF22Q8N9C0 903 aa20.56■□□□□ 0.88
RXRB-202ENST00000374685 ZBTB12Q9Y330 459 aaPredicted RBP20.56■□□□□ 0.88
RXRB-202ENST00000374685 MORC2Q9Y6X9 1032 aaPredicted RBP20.56■□□□□ 0.88
RXRB-202ENST00000374685 IGKV6D-41A0A0C4DH26 115 aa20.55■□□□□ 0.88
RXRB-202ENST00000374685 ERCC3P19447 782 aa20.55■□□□□ 0.88
RXRB-202ENST00000374685 PMS1P54277 932 aaKnown RBP20.55■□□□□ 0.88
RXRB-202ENST00000374685 MTF1Q14872 753 aa20.55■□□□□ 0.88
RXRB-202ENST00000374685 NR1I3Q14994 352 aa20.55■□□□□ 0.88
RXRB-202ENST00000374685 DYMQ7RTS9 669 aa20.55■□□□□ 0.88
RXRB-202ENST00000374685 LRRC37AA6NMS7 1700 aa20.55■□□□□ 0.88
RXRB-202ENST00000374685 ICA1Q05084 483 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 ZNF658Q5TYW1 1059 aaPredicted RBP20.54■□□□□ 0.88
RXRB-202ENST00000374685 SLFN13Q68D06 897 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 TC2NQ8N9U0 490 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 STK32BQ9NY57 414 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 PI4KBQ9UBF8 816 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 SCN9AQ15858 1988 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 PNMA6FA0A0J9YX94 578 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 RBL2Q08999 1139 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 KRT31Q15323 416 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 FILIP1LQ4L180 1135 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 PPFIBP1Q86W92 1011 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 KIF18AQ8NI77 898 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 CNKSR1Q969H4 720 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 PYM1Q9BRP8 204 aaKnown RBP20.54■□□□□ 0.88
RXRB-202ENST00000374685 LRWD1Q9UFC0 647 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 DNAI1Q9UI46 699 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 TERF2Q15554 542 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 TOGARAM2Q6ZUX3 1019 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 DEFB132Q7Z7B7 95 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 CDK5RAP3Q96JB5 506 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 PSTPIP2Q9H939 334 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 ZNF277Q9NRM2 450 aaPredicted RBP20.54■□□□□ 0.88
RXRB-202ENST00000374685 RMND1Q9NWS8 449 aa20.54■□□□□ 0.88
RXRB-202ENST00000374685 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.54■□□□□ 0.88
RXRB-202ENST00000374685 A0A1B0GTH6 734 aa20.53■□□□□ 0.88
RXRB-202ENST00000374685 YDJCA8MPS7 323 aa20.53■□□□□ 0.88
RXRB-202ENST00000374685 SSBP05455 408 aaKnown RBP eCLIP20.53■□□□□ 0.88
RXRB-202ENST00000374685 PDE4DQ08499 809 aa20.53■□□□□ 0.88
RXRB-202ENST00000374685 TRIM47Q96LD4 638 aa20.53■□□□□ 0.88
RXRB-202ENST00000374685 CSRNP1Q96S65 589 aa20.53■□□□□ 0.88
RXRB-202ENST00000374685 TULP2O00295 520 aa20.53■□□□□ 0.88
RXRB-202ENST00000374685 GH2P01242 217 aa20.53■□□□□ 0.88
RXRB-202ENST00000374685 FCER1AP12319 257 aa20.53■□□□□ 0.88
RXRB-202ENST00000374685 APTXQ7Z2E3 356 aaKnown RBP20.53■□□□□ 0.88
RXRB-202ENST00000374685 NUDT12Q9BQG2 462 aa20.53■□□□□ 0.88
RXRB-202ENST00000374685 ADD3Q9UEY8 706 aaKnown RBP20.53■□□□□ 0.88
RXRB-202ENST00000374685 PAXBP1Q9Y5B6 917 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms