RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 SLF1Q9BQI6 1058 aa20.2■□□□□ 0.82
PFDN6-201ENST00000374606 JMJD4Q9H9V9 463 aa20.2■□□□□ 0.82
PFDN6-201ENST00000374606 FBXO28Q9NVF7 368 aa20.2■□□□□ 0.82
PFDN6-201ENST00000374606 CHMP5Q9NZZ3 219 aa20.2■□□□□ 0.82
PFDN6-201ENST00000374606 PRR12Q9ULL5 1215 aa20.2■□□□□ 0.82
PFDN6-201ENST00000374606 H3BQV1 296 aa20.19■□□□□ 0.82
PFDN6-201ENST00000374606 FLOT1O75955 427 aa20.19■□□□□ 0.82
PFDN6-201ENST00000374606 PDIA4P13667 645 aaKnown RBP20.19■□□□□ 0.82
PFDN6-201ENST00000374606 XBP1P17861 261 aa20.19■□□□□ 0.82
PFDN6-201ENST00000374606 PKN1Q16512 942 aa20.19■□□□□ 0.82
PFDN6-201ENST00000374606 CDC37Q16543 378 aaPredicted RBP20.19■□□□□ 0.82
PFDN6-201ENST00000374606 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
PFDN6-201ENST00000374606 FASTKD5Q7L8L6 764 aaKnown RBP20.19■□□□□ 0.82
PFDN6-201ENST00000374606 KIFC2Q96AC6 838 aa20.19■□□□□ 0.82
PFDN6-201ENST00000374606 MTMR8Q96EF0 704 aa20.19■□□□□ 0.82
PFDN6-201ENST00000374606 A0A1W2PPC1 479 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 VPS37CA5D8V6 355 aaPredicted RBP20.18■□□□□ 0.82
PFDN6-201ENST00000374606 USP17L15C9J2P7 530 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 USP17L13C9JLJ4 530 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 USP17L11C9JVI0 530 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 USP17L18D6R9N7 530 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 USP17L22D6RA61 530 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 USP17L17D6RBQ6 530 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 USP17L19D6RCP7 530 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 USP17L20D6RJB6 530 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 hCG_1984214I3L0E3 225 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 ZBTB5O15062 677 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 STX6O43752 255 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 NUCB2P80303 420 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 USP17L24Q0WX57 530 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 HEATR3Q7Z4Q2 680 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 ZNF713Q8N859 430 aaPredicted RBP20.18■□□□□ 0.82
PFDN6-201ENST00000374606 SLC17A8Q8NDX2 589 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 UNC93B1Q9H1C4 597 aa20.18■□□□□ 0.82
PFDN6-201ENST00000374606 PNMA6FA0A0J9YX94 578 aa20.17■□□□□ 0.82
PFDN6-201ENST00000374606 DLL1O00548 723 aa20.17■□□□□ 0.82
PFDN6-201ENST00000374606 SGPL1O95470 568 aa20.17■□□□□ 0.82
PFDN6-201ENST00000374606 CYP2C8P10632 490 aa20.17■□□□□ 0.82
PFDN6-201ENST00000374606 QRICH1Q2TAL8 776 aa20.17■□□□□ 0.82
PFDN6-201ENST00000374606 TREML2Q5T2D2 321 aa20.17■□□□□ 0.82
PFDN6-201ENST00000374606 PRPF38AQ8NAV1 312 aaKnown RBP20.17■□□□□ 0.82
PFDN6-201ENST00000374606 GPKOWQ92917 476 aaPredicted RBP eCLIP20.17■□□□□ 0.82
PFDN6-201ENST00000374606 PPP1R9AQ9ULJ8 1098 aa20.17■□□□□ 0.82
PFDN6-201ENST00000374606 AGTPBP1Q9UPW5 1226 aa20.17■□□□□ 0.82
PFDN6-201ENST00000374606 RLFQ13129 1914 aa20.16■□□□□ 0.82
PFDN6-201ENST00000374606 CAPN2P17655 700 aa20.16■□□□□ 0.82
PFDN6-201ENST00000374606 PABPC4Q13310 644 aaKnown RBP eCLIP20.16■□□□□ 0.824e-9■■■□□ 17.5
PFDN6-201ENST00000374606 WWC2Q6AWC2 1192 aa20.16■□□□□ 0.82
PFDN6-201ENST00000374606 GPAT2Q6NUI2 795 aa20.16■□□□□ 0.82
PFDN6-201ENST00000374606 CATSPERGQ6ZRH7 1159 aa20.16■□□□□ 0.82
PFDN6-201ENST00000374606 RGS22Q8NE09 1264 aa20.16■□□□□ 0.82
PFDN6-201ENST00000374606 RANBP17Q9H2T7 1088 aaKnown RBP20.16■□□□□ 0.82
PFDN6-201ENST00000374606 VPS54Q9P1Q0 977 aa20.16■□□□□ 0.82
PFDN6-201ENST00000374606 GABRQQ9UN88 632 aa20.16■□□□□ 0.82
PFDN6-201ENST00000374606 ADCY3O60266 1144 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 EVI5O60447 810 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 SNAP25P60880 206 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 IRX3P78415 501 aaPredicted RBP20.15■□□□□ 0.82
PFDN6-201ENST00000374606 GUCY1B3Q02153 619 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 PKP1Q13835 747 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 KRT40Q6A162 431 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 CCDC148Q8NFR7 591 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 FBXO18Q8NFZ0 1043 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 CCDC12Q8WUD4 166 aaPredicted RBP20.15■□□□□ 0.82
PFDN6-201ENST00000374606 SH3GLB2Q9NR46 395 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 GJB4Q9NTQ9 266 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 BARHL2Q9NY43 387 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 MTMR6Q9Y217 621 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 A0A0G2JMZ2 1700 aa20.15■□□□□ 0.82
PFDN6-201ENST00000374606 STXBP3O00186 592 aa20.14■□□□□ 0.81
PFDN6-201ENST00000374606 FDX1P10109 184 aa20.14■□□□□ 0.81
PFDN6-201ENST00000374606 NAPAP54920 295 aa20.14■□□□□ 0.81
PFDN6-201ENST00000374606 COG2Q14746 738 aa20.14■□□□□ 0.81
PFDN6-201ENST00000374606 FAM177A1Q8N128 213 aaPredicted RBP20.14■□□□□ 0.81
PFDN6-201ENST00000374606 ATG4CQ96DT6 458 aa20.14■□□□□ 0.81
PFDN6-201ENST00000374606 AMNQ9BXJ7 453 aa20.14■□□□□ 0.81
PFDN6-201ENST00000374606 CTDP1Q9Y5B0 961 aaPredicted RBP20.14■□□□□ 0.81
PFDN6-201ENST00000374606 PPP1R11O60927 126 aaPredicted RBP20.13■□□□□ 0.81
PFDN6-201ENST00000374606 ZBED4O75132 1171 aa20.13■□□□□ 0.81
PFDN6-201ENST00000374606 BRD1O95696 1058 aa20.13■□□□□ 0.81
PFDN6-201ENST00000374606 INHAP05111 366 aa20.13■□□□□ 0.81
PFDN6-201ENST00000374606 ZSCAN22P10073 491 aaPredicted RBP20.13■□□□□ 0.81
PFDN6-201ENST00000374606 HOXA7P31268 230 aaPredicted RBP20.13■□□□□ 0.81
PFDN6-201ENST00000374606 DSG3P32926 999 aa20.13■□□□□ 0.81
PFDN6-201ENST00000374606 FLT3LGP49771 235 aa20.13■□□□□ 0.81
PFDN6-201ENST00000374606 TRAF1Q13077 416 aa20.13■□□□□ 0.81
PFDN6-201ENST00000374606 PPP1R18Q6NYC8 613 aa20.13■□□□□ 0.81
PFDN6-201ENST00000374606 CCDC174Q6PII3 467 aa20.13■□□□□ 0.81
PFDN6-201ENST00000374606 FBXO11Q86XK2 927 aa20.13■□□□□ 0.81
PFDN6-201ENST00000374606 PXYLP1Q8TE99 480 aa20.13■□□□□ 0.81
PFDN6-201ENST00000374606 COL11A1P12107 1806 aaPredicted RBP20.13■□□□□ 0.81
PFDN6-201ENST00000374606 TFRCP02786 760 aaKnown RBP20.12■□□□□ 0.81
PFDN6-201ENST00000374606 MMP1P03956 469 aa20.12■□□□□ 0.81
PFDN6-201ENST00000374606 ELNP15502 786 aa20.12■□□□□ 0.81
PFDN6-201ENST00000374606 NLRP5P59047 1200 aa20.12■□□□□ 0.81
PFDN6-201ENST00000374606 SAFBQ15424 915 aaKnown RBP eCLIP20.12■□□□□ 0.81
PFDN6-201ENST00000374606 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
PFDN6-201ENST00000374606 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
PFDN6-201ENST00000374606 PHF20Q9BVI0 1012 aa20.12■□□□□ 0.81
PFDN6-201ENST00000374606 SLC38A10Q9HBR0 1119 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms