RNA–Protein interactions for RNA: ENST00000374218.6

PTPN20-201, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN20, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-201ENST00000374218 SNRNP48Q6IEG0 339 aaKnown RBP10.5□□□□□ -0.73
PTPN20-201ENST00000374218 SAMD3Q8N6K7 520 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 GPRC5AQ8NFJ5 357 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 MAF1Q9H063 256 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 ZMYND12Q9H0C1 365 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 FBXO40Q9UH90 709 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 MMP1P03956 469 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 CYP2C8P10632 490 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 ALAS1P13196 640 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 HSPA6P17066 643 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 KRT2P35908 639 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 C1QTNF8P60827 252 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 GUCY1B3Q02153 619 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 TMEM132BQ14DG7 1078 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 AGBL1Q96MI9 1066 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 PHF20Q9BVI0 1012 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 ZSCAN16Q9H4T2 348 aaPredicted RBP10.5□□□□□ -0.73
PTPN20-201ENST00000374218 CHST13Q8NET6 341 aa10.49□□□□□ -0.73
PTPN20-201ENST00000374218 SPATC1LQ9H0A9 340 aa10.49□□□□□ -0.73
PTPN20-201ENST00000374218 ZNF214Q9UL59 606 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-201ENST00000374218 PCDHA4Q9UN74 947 aa10.49□□□□□ -0.73
PTPN20-201ENST00000374218 KCNJ14Q9UNX9 436 aa10.49□□□□□ -0.73
PTPN20-201ENST00000374218 PHIPQ8WWQ0 1821 aa10.49□□□□□ -0.73
PTPN20-201ENST00000374218 IGF2BP3O00425 579 aaKnown RBP eCLIP10.49□□□□□ -0.73
PTPN20-201ENST00000374218 PPP1R11O60927 126 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-201ENST00000374218 ZSCAN22P10073 491 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-201ENST00000374218 DIS3L2Q8IYB7 885 aaKnown RBP10.49□□□□□ -0.73
PTPN20-201ENST00000374218 BLIDQ8IZY5 108 aa10.49□□□□□ -0.73
PTPN20-201ENST00000374218 REPS2Q8NFH8 660 aa10.49□□□□□ -0.73
PTPN20-201ENST00000374218 TRERF1Q96PN7 1200 aa10.49□□□□□ -0.73
PTPN20-201ENST00000374218 FOXP1Q9H334 677 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-201ENST00000374218 RIC8AQ9NPQ8 531 aa10.49□□□□□ -0.73
PTPN20-201ENST00000374218 MAP3K20Q9NYL2 800 aaKnown RBP10.49□□□□□ -0.73
PTPN20-201ENST00000374218 ZNF536O15090 1300 aa10.49□□□□□ -0.73
PTPN20-201ENST00000374218 RIOX2Q8IUF8 465 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 REXO1Q8N1G1 1221 aaKnown RBP10.48□□□□□ -0.73
PTPN20-201ENST00000374218 DAGLBQ8NCG7 672 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 RBPJLQ9UBG7 517 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 MTMR6Q9Y217 621 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 GCOM1H8Y6P7 765 aaPredicted RBP10.48□□□□□ -0.73
PTPN20-201ENST00000374218 CA12O43570 354 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 FOSP01100 380 aaPredicted RBP10.48□□□□□ -0.73
PTPN20-201ENST00000374218 POLR2MP0CAP2 368 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 DDIT3P35638 169 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 VEGFBP49765 207 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 BRAPQ7Z569 592 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 MROH8Q9H579 483 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 ACAD9Q9H845 621 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 HOMER2Q9NSB8 354 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 RNF146Q9NTX7 359 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 AOC2O75106 756 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 BRD1O95696 1058 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 ERVK-9P63128 1117 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 ERVK-24P63145 666 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 FAM110CQ1W6H9 321 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 NCAPG2Q86XI2 1143 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 ANKRD13CQ8N6S4 541 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 SHCBP1Q8NEM2 672 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 EHMT1Q9H9B1 1298 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 GJB4Q9NTQ9 266 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 BTBD7Q9P203 1132 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 MORF4L1Q9UBU8 362 aa10.48□□□□□ -0.73
PTPN20-201ENST00000374218 CCDC194A0A1B0GVG4 234 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 SPDYE3A6NKU9 549 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 TLR2O60603 784 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 CFBP00751 764 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 TYW1BQ6NUM6 668 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 KRT25Q7Z3Z0 450 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 LOC285556D6RIA3 1793 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 BTBD18B2RXH4 712 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 PIK3CDO00329 1044 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 AP3B2Q13367 1082 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 WDR78Q5VTH9 848 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 NOSTRINQ8IVI9 506 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 BEGAINQ9BUH8 593 aa10.47□□□□□ -0.73
PTPN20-201ENST00000374218 MOV10L1Q9BXT6 1211 aaKnown RBP10.47□□□□□ -0.73
PTPN20-201ENST00000374218 NOL7Q9UMY1 257 aaKnown RBP10.47□□□□□ -0.73
PTPN20-201ENST00000374218 F13A1P00488 732 aa10.46□□□□□ -0.73
PTPN20-201ENST00000374218 U2AF2P26368 475 aaKnown RBP eCLIP10.46□□□□□ -0.73
PTPN20-201ENST00000374218 NSMFQ6X4W1 530 aa10.46□□□□□ -0.73
PTPN20-201ENST00000374218 ANKRD35Q8N283 1001 aa10.46□□□□□ -0.73
PTPN20-201ENST00000374218 IVNS1ABPQ9Y6Y0 642 aa10.46□□□□□ -0.73
PTPN20-201ENST00000374218 PFASO15067 1338 aa10.46□□□□□ -0.74
PTPN20-201ENST00000374218 ERCC3P19447 782 aa10.46□□□□□ -0.74
PTPN20-201ENST00000374218 MAPK4P31152 587 aa10.46□□□□□ -0.74
PTPN20-201ENST00000374218 KCTD2Q14681 263 aa10.46□□□□□ -0.74
PTPN20-201ENST00000374218 FOXD4L5Q5VV16 416 aaPredicted RBP10.46□□□□□ -0.74
PTPN20-201ENST00000374218 RNF207Q6ZRF8 634 aa10.46□□□□□ -0.74
PTPN20-201ENST00000374218 FERMT3Q86UX7 667 aa10.46□□□□□ -0.74
PTPN20-201ENST00000374218 FOXD4L4Q8WXT5 416 aaPredicted RBP10.46□□□□□ -0.74
PTPN20-201ENST00000374218 ZIC5Q96T25 663 aa10.46□□□□□ -0.74
PTPN20-201ENST00000374218 TXNRD2Q9NNW7 524 aa10.46□□□□□ -0.74
PTPN20-201ENST00000374218 BAZ2BQ9UIF8 2168 aaKnown RBP10.45□□□□□ -0.74
PTPN20-201ENST00000374218 STRNO43815 780 aa10.45□□□□□ -0.74
PTPN20-201ENST00000374218 CNMDO75829 334 aa10.45□□□□□ -0.74
PTPN20-201ENST00000374218 HTRA3P83110 453 aa10.45□□□□□ -0.74
PTPN20-201ENST00000374218 NONOQ15233 471 aaKnown RBP eCLIP10.45□□□□□ -0.74
PTPN20-201ENST00000374218 BIN2Q9UBW5 565 aaPredicted RBP10.45□□□□□ -0.74
PTPN20-201ENST00000374218 CPA4Q9UI42 421 aa10.45□□□□□ -0.74
PTPN20-201ENST00000374218 RIPK3Q9Y572 518 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms