RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 MTMR14Q8NCE2 650 aa16.81■□□□□ 0.28
UBXN11-204ENST00000374217 CCDC148Q8NFR7 591 aa16.81■□□□□ 0.28
UBXN11-204ENST00000374217 KRT23Q9C075 422 aa16.81■□□□□ 0.28
UBXN11-204ENST00000374217 NBPF3Q9H094 633 aa16.81■□□□□ 0.28
UBXN11-204ENST00000374217 CEP131Q9UPN4 1083 aa16.81■□□□□ 0.28
UBXN11-204ENST00000374217 NID2Q14112 1375 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 CYP2D6P10635 497 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 ATP2B1P20020 1258 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 METAP2P50579 478 aaKnown RBP eCLIP16.8■□□□□ 0.28
UBXN11-204ENST00000374217 ANTXR2P58335 489 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 ZNF280AP59817 542 aaPredicted RBP16.8■□□□□ 0.28
UBXN11-204ENST00000374217 RRP12Q5JTH9 1297 aaKnown RBP16.8■□□□□ 0.28
UBXN11-204ENST00000374217 ZNF569Q5MCW4 686 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 C12orf60Q5U649 245 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 AFAP1L1Q8TED9 768 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 STAG1Q8WVM7 1258 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 CCDC102AQ96A19 550 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 TMEM87BQ96K49 555 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 DESI2Q9BSY9 194 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 IDI2Q9BXS1 227 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 SHTN1A0MZ66 631 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 CLRN2A0PK11 232 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 SOWAHDA6NJG2 315 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 A6NNZ2 444 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 PCP11498 1178 aaKnown RBP16.8■□□□□ 0.28
UBXN11-204ENST00000374217 PTPREP23469 700 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 CDC27P30260 824 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 VSNL1P62760 191 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 TCP10Q12799 353 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 NFIAQ12857 509 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 TUBB8Q3ZCM7 444 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 RILPL1Q5EBL4 403 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 RAD9BQ6WBX8 426 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 ZSCAN29Q8IWY8 852 aaPredicted RBP16.8■□□□□ 0.28
UBXN11-204ENST00000374217 IGSF22Q8N9C0 903 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 RUBCNQ92622 972 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 NCAPGQ9BPX3 1015 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 VEZTQ9HBM0 779 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 LZTFL1Q9NQ48 299 aa16.8■□□□□ 0.28
UBXN11-204ENST00000374217 PUF60Q9UHX1 559 aaKnown RBP16.8■□□□□ 0.28
UBXN11-204ENST00000374217 SHOX2O60902 331 aaPredicted RBP16.79■□□□□ 0.28
UBXN11-204ENST00000374217 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
UBXN11-204ENST00000374217 PACS2Q86VP3 889 aa16.79■□□□□ 0.28
UBXN11-204ENST00000374217 FAM204AQ9H8W3 233 aa16.79■□□□□ 0.28
UBXN11-204ENST00000374217 ZNF287Q9HBT7 754 aa16.79■□□□□ 0.28
UBXN11-204ENST00000374217 DDX4Q9NQI0 724 aaKnown RBP16.79■□□□□ 0.28
UBXN11-204ENST00000374217 ZNF70Q9UC06 446 aaPredicted RBP16.79■□□□□ 0.28
UBXN11-204ENST00000374217 TIAM2Q8IVF5 1701 aa16.79■□□□□ 0.28
UBXN11-204ENST00000374217 CDK5RAP2Q96SN8 1893 aa16.78■□□□□ 0.28
UBXN11-204ENST00000374217 B4E1Z4 1266 aa16.78■□□□□ 0.28
UBXN11-204ENST00000374217 DDNO94850 711 aaPredicted RBP16.78■□□□□ 0.28
UBXN11-204ENST00000374217 HLA-DOAP06340 250 aa16.78■□□□□ 0.28
UBXN11-204ENST00000374217 USP8P40818 1118 aa16.78■□□□□ 0.28
UBXN11-204ENST00000374217 SAFBQ15424 915 aaKnown RBP eCLIP16.78■□□□□ 0.28
UBXN11-204ENST00000374217 TBC1D10BQ4KMP7 808 aaPredicted RBP16.78■□□□□ 0.28
UBXN11-204ENST00000374217 CDKAL1Q5VV42 579 aa16.78■□□□□ 0.28
UBXN11-204ENST00000374217 MMS22LQ6ZRQ5 1243 aa16.78■□□□□ 0.28
UBXN11-204ENST00000374217 APTXQ7Z2E3 356 aaKnown RBP16.78■□□□□ 0.28
UBXN11-204ENST00000374217 SAMD7Q7Z3H4 446 aa16.78■□□□□ 0.28
UBXN11-204ENST00000374217 CEP89Q96ST8 783 aa16.78■□□□□ 0.28
UBXN11-204ENST00000374217 MYCBPQ99417 103 aaPredicted RBP16.78■□□□□ 0.28
UBXN11-204ENST00000374217 MKNK2Q9HBH9 465 aa16.78■□□□□ 0.28
UBXN11-204ENST00000374217 INCENPQ9NQS7 918 aa16.78■□□□□ 0.28
UBXN11-204ENST00000374217 GPRC5DQ9NZD1 345 aa16.78■□□□□ 0.28
UBXN11-204ENST00000374217 ADD3Q9UEY8 706 aaKnown RBP16.78■□□□□ 0.28
UBXN11-204ENST00000374217 TCP10L2B9ZVM9 353 aa16.77■□□□□ 0.28
UBXN11-204ENST00000374217 WNT10BO00744 389 aa16.77■□□□□ 0.28
UBXN11-204ENST00000374217 SH2B2O14492 632 aaPredicted RBP16.77■□□□□ 0.28
UBXN11-204ENST00000374217 ENTPD3O75355 529 aa16.77■□□□□ 0.28
UBXN11-204ENST00000374217 AMPD2Q01433 879 aa16.77■□□□□ 0.28
UBXN11-204ENST00000374217 NBPF9Q3BBW0 867 aa16.77■□□□□ 0.28
UBXN11-204ENST00000374217 SPDYE2Q495Y8 402 aa16.77■□□□□ 0.28
UBXN11-204ENST00000374217 CYP26C1Q6V0L0 522 aa16.77■□□□□ 0.28
UBXN11-204ENST00000374217 TADA2BQ86TJ2 420 aa16.77■□□□□ 0.28
UBXN11-204ENST00000374217 SGMS1Q86VZ5 419 aa16.77■□□□□ 0.28
UBXN11-204ENST00000374217 NOSTRINQ8IVI9 506 aa16.77■□□□□ 0.28
UBXN11-204ENST00000374217 ESR2Q92731 530 aa16.77■□□□□ 0.28
UBXN11-204ENST00000374217 DHX36Q9H2U1 1008 aaKnown RBP16.77■□□□□ 0.28
UBXN11-204ENST00000374217 MYO6Q9UM54 1294 aa16.77■□□□□ 0.28
UBXN11-204ENST00000374217 RANBP6O60518 1105 aaKnown RBP16.77■□□□□ 0.27
UBXN11-204ENST00000374217 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.27
UBXN11-204ENST00000374217 PRDM1O75626 825 aa16.77■□□□□ 0.27
UBXN11-204ENST00000374217 SPAG1Q07617 926 aa16.77■□□□□ 0.27
UBXN11-204ENST00000374217 RBL2Q08999 1139 aa16.77■□□□□ 0.27
UBXN11-204ENST00000374217 ZNF662Q6ZS27 426 aa16.77■□□□□ 0.27
UBXN11-204ENST00000374217 SLC35F6Q8N357 371 aa16.77■□□□□ 0.27
UBXN11-204ENST00000374217 CLIC6Q96NY7 704 aa16.77■□□□□ 0.27
UBXN11-204ENST00000374217 FOXP1Q9H334 677 aaPredicted RBP16.77■□□□□ 0.27
UBXN11-204ENST00000374217 GPHNQ9NQX3 736 aaPredicted RBP16.77■□□□□ 0.27
UBXN11-204ENST00000374217 FBXO2Q9UK22 296 aaPredicted RBP16.77■□□□□ 0.27
UBXN11-204ENST00000374217 ATXN2Q99700 1313 aaKnown RBP16.77■□□□□ 0.27
UBXN11-204ENST00000374217 FOCADQ5VW36 1801 aa16.77■□□□□ 0.27
UBXN11-204ENST00000374217 MYH1P12882 1939 aa16.76■□□□□ 0.27
UBXN11-204ENST00000374217 LAMB1P07942 1786 aa16.76■□□□□ 0.27
UBXN11-204ENST00000374217 SMIM22K7EJ46 135 aa16.76■□□□□ 0.27
UBXN11-204ENST00000374217 PPFIA3O75145 1194 aa16.76■□□□□ 0.27
UBXN11-204ENST00000374217 RNF40O75150 1001 aa16.76■□□□□ 0.27
UBXN11-204ENST00000374217 PRPF6O94906 941 aaKnown RBP16.76■□□□□ 0.27
UBXN11-204ENST00000374217 EVX2Q03828 476 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms