RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 MORC3Q14149 939 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 PPP2R5DQ14738 602 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 NCAPGQ9BPX3 1015 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 BLZF1Q9H2G9 400 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 GREM2Q9H772 168 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 SERPINB13Q9UIV8 391 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 ZNF215Q9UL58 517 aaPredicted RBP12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 THAP12O43422 761 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 NSFP46459 744 aaKnown RBP12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 WHAMMP3Q1A5X7 153 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 SH2D4BQ5SQS7 431 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 RINT1Q6NUQ1 792 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 ANO3Q9BYT9 981 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 OGFRQ9NZT2 677 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 LRFN2Q9ULH4 789 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 PHLPP2Q6ZVD8 1323 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 H2AFZP0C0S5 128 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 MFAP3P55082 362 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 LMNB2Q03252 620 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 MAP3K21Q5TCX8 1036 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 LRCH2Q5VUJ6 765 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 DENND2CQ68D51 928 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 H2AFVQ71UI9 128 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 VPS37BQ9H9H4 285 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 NLRC4Q9NPP4 1024 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 HYOU1Q9Y4L1 999 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 SURF1Q15526 300 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 GKAP1Q5VSY0 366 aaPredicted RBP12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 MICALL1Q8N3F8 863 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 RDH13Q8NBN7 331 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 MCUR1Q96AQ8 359 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 FOXP1Q9H334 677 aaPredicted RBP12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 DNAJC21Q5F1R6 531 aaKnown RBP12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 TYW1BQ6NUM6 668 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 PALM2Q8IXS6 379 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 ANKRD36BP1Q96IX9 119 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 NT5C1BQ96P26 610 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 ADCY9O60503 1353 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 MYO3BQ8WXR4 1341 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 A0A0D9SFI3 127 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 TCP1P17987 556 aaKnown RBP12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 ADAM9Q13443 819 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 DALRD3Q5D0E6 543 aaKnown RBP12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 ZMYM1Q5SVZ6 1142 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 CLEC4GQ6UXB4 293 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 FOXP4Q8IVH2 680 aaPredicted RBP12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 HAUS4Q9H6D7 363 aa12.16□□□□□ -0.46
PHACTR4-202ENST00000373839 RBM6P78332 1123 aaKnown RBP12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 IRX5P78411 483 aaPredicted RBP12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 ME3Q16798 604 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 ZNF449Q6P9G9 518 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 VSIG1Q86XK7 387 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 KLHL7Q8IXQ5 586 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 SLF1Q9BQI6 1058 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 TMEM206Q9H813 350 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 BMP3P12645 472 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 LMNB1P20700 586 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 CCND2P30279 289 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 HPDP32754 393 aaPredicted RBP12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 ALCAMQ13740 583 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 CEP85LQ5SZL2 805 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 ANKRD20A3Q5VUR7 823 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 NUF2Q9BZD4 464 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 TRIM31Q9BZY9 425 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 STAP2Q9UGK3 403 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 ZBTB1Q9Y2K1 713 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 NDUFB9Q9Y6M9 179 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 A0A1W2PQ27 194 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 A0A1W2PQ64 194 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 A0A1W2PQD8 194 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 hCG_1642624A0A1W2PR95 340 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 NDUFAB1O14561 156 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 PRPSAP1Q14558 356 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 UNC5CLQ8IV45 518 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 PPP4R1Q8TF05 950 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 PI4KBQ9UBF8 816 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 SAR1BQ9Y6B6 198 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 RNF40O75150 1001 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 SRGAP2BP0DMP2 458 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 LRRC24Q50LG9 513 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 CIAPIN1Q6FI81 312 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 KRBA2Q6ZNG9 492 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 POMGNT1Q8WZA1 660 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 COA1Q9GZY4 146 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 SLC12A6Q9UHW9 1150 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 PCDHA4Q9UN74 947 aa12.15□□□□□ -0.46
PHACTR4-202ENST00000373839 KDM5DQ9BY66 1539 aa12.15□□□□□ -0.47
PHACTR4-202ENST00000373839 HNRNPDLO14979 420 aaKnown RBP12.15□□□□□ -0.47
PHACTR4-202ENST00000373839 TROVE2P10155 538 aaKnown RBP eCLIP12.15□□□□□ -0.47
PHACTR4-202ENST00000373839 PHKA1P46020 1223 aa12.15□□□□□ -0.47
PHACTR4-202ENST00000373839 RASSF2P50749 326 aa12.15□□□□□ -0.47
PHACTR4-202ENST00000373839 SEPT2Q15019 361 aa12.15□□□□□ -0.47
PHACTR4-202ENST00000373839 FAM173BQ6P4H8 233 aa12.15□□□□□ -0.47
PHACTR4-202ENST00000373839 POTEDQ86YR6 584 aa12.15□□□□□ -0.47
PHACTR4-202ENST00000373839 CDKL2Q92772 493 aa12.15□□□□□ -0.47
PHACTR4-202ENST00000373839 RSRC1Q96IZ7 334 aaKnown RBP12.15□□□□□ -0.47
PHACTR4-202ENST00000373839 GSDMAQ96QA5 445 aa12.15□□□□□ -0.47
PHACTR4-202ENST00000373839 KRT12Q99456 494 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms