RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 NKX3-2P78367 333 aa14.99□□□□□ -0.01
HDAC8-204ENST00000373560 GABPAQ06546 454 aa14.99□□□□□ -0.01
HDAC8-204ENST00000373560 TMEM63BQ5T3F8 832 aa14.99□□□□□ -0.01
HDAC8-204ENST00000373560 ASCL5Q7RTU5 278 aa14.99□□□□□ -0.01
HDAC8-204ENST00000373560 LMCD1Q9NZU5 365 aa14.99□□□□□ -0.01
HDAC8-204ENST00000373560 RIPK3Q9Y572 518 aa14.99□□□□□ -0.01
HDAC8-204ENST00000373560 CACNA1BQ00975 2339 aa14.99□□□□□ -0.01
HDAC8-204ENST00000373560 MPHOSPH10O00566 681 aaKnown RBP14.98□□□□□ -0.01
HDAC8-204ENST00000373560 STAT3P40763 770 aa14.98□□□□□ -0.01
HDAC8-204ENST00000373560 DEFB103AP81534 67 aa14.98□□□□□ -0.01
HDAC8-204ENST00000373560 SPRYD3Q8NCJ5 442 aa14.98□□□□□ -0.01
HDAC8-204ENST00000373560 PHOSPHO2Q8TCD6 241 aa14.98□□□□□ -0.01
HDAC8-204ENST00000373560 SPC25Q9HBM1 224 aa14.98□□□□□ -0.01
HDAC8-204ENST00000373560 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.98□□□□□ -0.01
HDAC8-204ENST00000373560 KMT2BQ9UMN6 2715 aaPredicted RBP14.98□□□□□ -0.01
HDAC8-204ENST00000373560 VWA5AO00534 786 aa14.97□□□□□ -0.01
HDAC8-204ENST00000373560 PFKMP08237 780 aa14.97□□□□□ -0.01
HDAC8-204ENST00000373560 USP5P45974 858 aa14.97□□□□□ -0.01
HDAC8-204ENST00000373560 VCPP55072 806 aaKnown RBP14.97□□□□□ -0.01
HDAC8-204ENST00000373560 TCTN1Q2MV58 587 aa14.97□□□□□ -0.01
HDAC8-204ENST00000373560 ARMCX2Q7L311 632 aa14.97□□□□□ -0.01
HDAC8-204ENST00000373560 WDR63Q8IWG1 891 aa14.97□□□□□ -0.01
HDAC8-204ENST00000373560 MSL3Q8N5Y2 521 aaKnown RBP14.97□□□□□ -0.01
HDAC8-204ENST00000373560 ALDH8A1Q9H2A2 487 aaPredicted RBP14.97□□□□□ -0.01
HDAC8-204ENST00000373560 VCPKMTQ9H867 229 aa14.97□□□□□ -0.01
HDAC8-204ENST00000373560 LCTP09848 1927 aa14.96□□□□□ -0.01
HDAC8-204ENST00000373560 CACNA1HO95180 2353 aa14.96□□□□□ -0.01
HDAC8-204ENST00000373560 LINC01553A4QN01 128 aa14.96□□□□□ -0.01
HDAC8-204ENST00000373560 UBTFL1P0CB47 393 aaPredicted RBP14.96□□□□□ -0.01
HDAC8-204ENST00000373560 HERC4Q5GLZ8 1057 aaPredicted RBP14.96□□□□□ -0.01
HDAC8-204ENST00000373560 GORABQ5T7V8 394 aa14.96□□□□□ -0.01
HDAC8-204ENST00000373560 TLK2Q86UE8 772 aa14.96□□□□□ -0.01
HDAC8-204ENST00000373560 ADHFE1Q8IWW8 467 aa14.96□□□□□ -0.01
HDAC8-204ENST00000373560 GNEQ9Y223 722 aaKnown RBP14.96□□□□□ -0.01
HDAC8-204ENST00000373560 AKAP2Q9Y2D5 859 aa14.96□□□□□ -0.01
HDAC8-204ENST00000373560 TMEM221A6NGB7 291 aa14.95□□□□□ -0.02
HDAC8-204ENST00000373560 M0R296 226 aa14.95□□□□□ -0.02
HDAC8-204ENST00000373560 ACTN1P12814 892 aa14.95□□□□□ -0.02
HDAC8-204ENST00000373560 CYP7A1P22680 504 aa14.95□□□□□ -0.02
HDAC8-204ENST00000373560 FSCN1Q16658 493 aaKnown RBP14.95□□□□□ -0.02
HDAC8-204ENST00000373560 ABHD16BQ9H3Z7 469 aa14.95□□□□□ -0.02
HDAC8-204ENST00000373560 PPP1R9AQ9ULJ8 1098 aa14.95□□□□□ -0.02
HDAC8-204ENST00000373560 VPS13AQ96RL7 3174 aa14.95□□□□□ -0.02
HDAC8-204ENST00000373560 TNKSO95271 1327 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 PTPRCP08575 1304 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 MED19A0JLT2 244 aaPredicted RBP14.94□□□□□ -0.02
HDAC8-204ENST00000373560 KIF28PB7ZC32 967 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 WDR46O15213 610 aaKnown RBP14.94□□□□□ -0.02
HDAC8-204ENST00000373560 CYP2D6P10635 497 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 AKR1B1P15121 316 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 ZAP70P43403 619 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 ERVK-21P61565 698 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 WDR5P61964 334 aaKnown RBP14.94□□□□□ -0.02
HDAC8-204ENST00000373560 CLUL1Q15846 466 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 ERMP1Q7Z2K6 904 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 RNF135Q8IUD6 432 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 CCDC144CPQ8IYA2 1237 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 PBXIP1Q96AQ6 731 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 DDX11Q96FC9 970 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 C17orf80Q9BSJ5 609 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 TMX2Q9Y320 296 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 TRIP12Q14669 1992 aaPredicted RBP14.94□□□□□ -0.02
HDAC8-204ENST00000373560 DNAH14Q0VDD8 3507 aa14.94□□□□□ -0.02
HDAC8-204ENST00000373560 CABYRO75952 493 aa14.93□□□□□ -0.02
HDAC8-204ENST00000373560 SLC4A3P48751 1232 aa14.93□□□□□ -0.02
HDAC8-204ENST00000373560 TNFAIP2Q03169 654 aa14.93□□□□□ -0.02
HDAC8-204ENST00000373560 GPNMBQ14956 572 aa14.93□□□□□ -0.02
HDAC8-204ENST00000373560 SNRNP48Q6IEG0 339 aaKnown RBP14.93□□□□□ -0.02
HDAC8-204ENST00000373560 EP400NLQ6ZTU2 488 aa14.93□□□□□ -0.02
HDAC8-204ENST00000373560 BMP8AQ7Z5Y6 402 aa14.93□□□□□ -0.02
HDAC8-204ENST00000373560 TTC6Q86TZ1 520 aa14.93□□□□□ -0.02
HDAC8-204ENST00000373560 EDAQ92838 391 aa14.93□□□□□ -0.02
HDAC8-204ENST00000373560 FTOQ9C0B1 505 aaKnown RBP eCLIP14.93□□□□□ -0.02
HDAC8-204ENST00000373560 PRKAG3Q9UGI9 489 aa14.93□□□□□ -0.02
HDAC8-204ENST00000373560 NLRC5Q86WI3 1866 aa14.93□□□□□ -0.02
HDAC8-204ENST00000373560 IQCF3P0C7M6 154 aa14.92□□□□□ -0.02
HDAC8-204ENST00000373560 UQCRFS1P1P0C7P4 283 aa14.92□□□□□ -0.02
HDAC8-204ENST00000373560 SMPD1P17405 629 aa14.92□□□□□ -0.02
HDAC8-204ENST00000373560 CNTN2Q02246 1040 aa14.92□□□□□ -0.02
HDAC8-204ENST00000373560 ICA1Q05084 483 aa14.92□□□□□ -0.02
HDAC8-204ENST00000373560 PUS10Q3MIT2 529 aaKnown RBP14.92□□□□□ -0.02
HDAC8-204ENST00000373560 TCEAL5Q5H9L2 206 aa14.92□□□□□ -0.02
HDAC8-204ENST00000373560 FAM83BQ5T0W9 1011 aa14.92□□□□□ -0.02
HDAC8-204ENST00000373560 NOL8Q76FK4 1167 aaKnown RBP14.92□□□□□ -0.02
HDAC8-204ENST00000373560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.92□□□□□ -0.02
HDAC8-204ENST00000373560 SSH1Q8WYL5 1049 aa14.92□□□□□ -0.02
HDAC8-204ENST00000373560 ATOH1Q92858 354 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-204ENST00000373560 TGS1Q96RS0 853 aaKnown RBP14.92□□□□□ -0.02
HDAC8-204ENST00000373560 NUP88Q99567 741 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-204ENST00000373560 MEIS3Q99687 375 aa14.92□□□□□ -0.02
HDAC8-204ENST00000373560 PDGFCQ9NRA1 345 aa14.92□□□□□ -0.02
HDAC8-204ENST00000373560 SCN10AQ9Y5Y9 1956 aa14.92□□□□□ -0.02
HDAC8-204ENST00000373560 PTPRZ1P23471 2315 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-204ENST00000373560 BAZ2AQ9UIF9 1905 aaKnown RBP14.92□□□□□ -0.02
HDAC8-204ENST00000373560 H0Y858 1186 aa14.91□□□□□ -0.02
HDAC8-204ENST00000373560 DYNC1LI2O43237 492 aaPredicted RBP14.91□□□□□ -0.02
HDAC8-204ENST00000373560 LTBRP36941 435 aa14.91□□□□□ -0.02
HDAC8-204ENST00000373560 ID4P47928 161 aa14.91□□□□□ -0.02
HDAC8-204ENST00000373560 FAM117BQ6P1L5 589 aa14.91□□□□□ -0.02
HDAC8-204ENST00000373560 TRIM67Q6ZTA4 783 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms