RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 DCAF4Q8WV16 495 aa19.06■□□□□ 0.64
HDAC8-202ENST00000373556 RNPC3Q96LT9 517 aaKnown RBP19.06■□□□□ 0.64
HDAC8-202ENST00000373556 YTHDC1Q96MU7 727 aaKnown RBP19.06■□□□□ 0.64
HDAC8-202ENST00000373556 CYP39A1Q9NYL5 469 aa19.06■□□□□ 0.64
HDAC8-202ENST00000373556 CCPG1Q9ULG6 757 aa19.06■□□□□ 0.64
HDAC8-202ENST00000373556 ELP1O95163 1332 aa19.05■□□□□ 0.64
HDAC8-202ENST00000373556 FRMPD2Q68DX3 1309 aaPredicted RBP19.05■□□□□ 0.64
HDAC8-202ENST00000373556 ASB14A6NK59 587 aa19.05■□□□□ 0.64
HDAC8-202ENST00000373556 CTAGE5O15320 804 aa19.05■□□□□ 0.64
HDAC8-202ENST00000373556 TNFAIP2Q03169 654 aa19.05■□□□□ 0.64
HDAC8-202ENST00000373556 B4GALNT3Q6L9W6 998 aa19.05■□□□□ 0.64
HDAC8-202ENST00000373556 NSMFQ6X4W1 530 aa19.05■□□□□ 0.64
HDAC8-202ENST00000373556 RILPL2Q969X0 211 aa19.05■□□□□ 0.64
HDAC8-202ENST00000373556 PURBQ96QR8 312 aaKnown RBP19.05■□□□□ 0.64
HDAC8-202ENST00000373556 TMEM47Q9BQJ4 181 aa19.05■□□□□ 0.64
HDAC8-202ENST00000373556 UNC80Q8N2C7 3258 aa19.05■□□□□ 0.64
HDAC8-202ENST00000373556 CUL9Q8IWT3 2517 aa19.04■□□□□ 0.64
HDAC8-202ENST00000373556 A0A0U1RQG5 324 aaPredicted RBP19.04■□□□□ 0.64
HDAC8-202ENST00000373556 CDK7P50613 346 aa19.04■□□□□ 0.64
HDAC8-202ENST00000373556 SMAD3P84022 425 aaKnown RBP19.04■□□□□ 0.64
HDAC8-202ENST00000373556 EEPD1Q7L9B9 569 aa19.04■□□□□ 0.64
HDAC8-202ENST00000373556 SEMA6BQ9H3T3 888 aa19.04■□□□□ 0.64
HDAC8-202ENST00000373556 GPCPD1Q9NPB8 672 aa19.04■□□□□ 0.64
HDAC8-202ENST00000373556 PDGFCQ9NRA1 345 aa19.04■□□□□ 0.64
HDAC8-202ENST00000373556 TBX21Q9UL17 535 aa19.04■□□□□ 0.64
HDAC8-202ENST00000373556 CDH23Q9H251 3354 aa19.04■□□□□ 0.64
HDAC8-202ENST00000373556 CCDC171Q6TFL3 1326 aa19.03■□□□□ 0.64
HDAC8-202ENST00000373556 ARVCFO00192 962 aa19.03■□□□□ 0.64
HDAC8-202ENST00000373556 TIMP1P01033 207 aa19.03■□□□□ 0.64
HDAC8-202ENST00000373556 ICAM1P05362 532 aa19.03■□□□□ 0.64
HDAC8-202ENST00000373556 TOP1P11387 765 aaKnown RBP19.03■□□□□ 0.64
HDAC8-202ENST00000373556 SYDE2Q5VT97 1194 aa19.03■□□□□ 0.64
HDAC8-202ENST00000373556 TLK2Q86UE8 772 aa19.03■□□□□ 0.64
HDAC8-202ENST00000373556 FBXO16Q8IX29 292 aaPredicted RBP19.03■□□□□ 0.64
HDAC8-202ENST00000373556 CDX2Q99626 313 aaPredicted RBP19.03■□□□□ 0.64
HDAC8-202ENST00000373556 RANBP17Q9H2T7 1088 aaKnown RBP19.03■□□□□ 0.64
HDAC8-202ENST00000373556 TTYH1Q9H313 450 aaPredicted RBP19.03■□□□□ 0.64
HDAC8-202ENST00000373556 GNEQ9Y223 722 aaKnown RBP19.03■□□□□ 0.64
HDAC8-202ENST00000373556 ZMYM6O95789 1325 aa19.02■□□□□ 0.64
HDAC8-202ENST00000373556 MROH7Q68CQ1 1323 aa19.02■□□□□ 0.64
HDAC8-202ENST00000373556 SMPD1P17405 629 aa19.02■□□□□ 0.64
HDAC8-202ENST00000373556 TMEM63BQ5T3F8 832 aa19.02■□□□□ 0.64
HDAC8-202ENST00000373556 CXCL17Q6UXB2 119 aa19.02■□□□□ 0.64
HDAC8-202ENST00000373556 BTNL9Q6UXG8 535 aa19.02■□□□□ 0.64
HDAC8-202ENST00000373556 TCP11L1Q9NUJ3 509 aa19.02■□□□□ 0.64
HDAC8-202ENST00000373556 EYSQ5T1H1 3165 aa19.01■□□□□ 0.63
HDAC8-202ENST00000373556 NFIBO00712 420 aa19.01■□□□□ 0.63
HDAC8-202ENST00000373556 NKX3-2P78367 333 aa19.01■□□□□ 0.63
HDAC8-202ENST00000373556 TAPT1Q6NXT6 567 aa19.01■□□□□ 0.63
HDAC8-202ENST00000373556 TBC1D10CQ8IV04 446 aa19.01■□□□□ 0.63
HDAC8-202ENST00000373556 FAM126BQ8IXS8 530 aa19.01■□□□□ 0.63
HDAC8-202ENST00000373556 SMC5Q8IY18 1101 aa19.01■□□□□ 0.63
HDAC8-202ENST00000373556 PPP1R12CQ9BZL4 782 aa19.01■□□□□ 0.63
HDAC8-202ENST00000373556 AP5M1Q9H0R1 490 aa19.01■□□□□ 0.63
HDAC8-202ENST00000373556 DYNC1LI2O43237 492 aaPredicted RBP19■□□□□ 0.63
HDAC8-202ENST00000373556 PDHBP11177 359 aa19■□□□□ 0.63
HDAC8-202ENST00000373556 SDSP20132 328 aa19■□□□□ 0.63
HDAC8-202ENST00000373556 BAATQ14032 418 aaPredicted RBP19■□□□□ 0.63
HDAC8-202ENST00000373556 FSCN1Q16658 493 aaKnown RBP19■□□□□ 0.63
HDAC8-202ENST00000373556 AKNAD1Q5T1N1 836 aa19■□□□□ 0.63
HDAC8-202ENST00000373556 MFSD5Q6N075 450 aa19■□□□□ 0.63
HDAC8-202ENST00000373556 MFSD6Q6ZSS7 791 aa19■□□□□ 0.63
HDAC8-202ENST00000373556 TICAM2Q86XR7 235 aa19■□□□□ 0.63
HDAC8-202ENST00000373556 MYLIPQ8WY64 445 aa19■□□□□ 0.63
HDAC8-202ENST00000373556 BUD13Q9BRD0 619 aaKnown RBP eCLIP19■□□□□ 0.637e-6■■□□□ 11.5
HDAC8-202ENST00000373556 RWDD1Q9H446 243 aaPredicted RBP19■□□□□ 0.63
HDAC8-202ENST00000373556 NEDD4P46934 1319 aa19■□□□□ 0.63
HDAC8-202ENST00000373556 TLR3O15455 904 aaKnown RBP18.99■□□□□ 0.63
HDAC8-202ENST00000373556 IGHDP01880 384 aa18.99■□□□□ 0.63
HDAC8-202ENST00000373556 CSF2RAP15509 400 aa18.99■□□□□ 0.63
HDAC8-202ENST00000373556 SLC30A10Q6XR72 485 aa18.99■□□□□ 0.63
HDAC8-202ENST00000373556 C16orf59Q7L2K0 433 aa18.99■□□□□ 0.63
HDAC8-202ENST00000373556 PLEKHM2Q8IWE5 1019 aa18.99■□□□□ 0.63
HDAC8-202ENST00000373556 ZKSCAN3Q9BRR0 538 aa18.99■□□□□ 0.63
HDAC8-202ENST00000373556 LAMA4Q16363 1823 aa18.99■□□□□ 0.63
HDAC8-202ENST00000373556 PTPDC1A2A3K4 754 aa18.98■□□□□ 0.63
HDAC8-202ENST00000373556 ALDH5A1P51649 535 aaPredicted RBP18.98■□□□□ 0.63
HDAC8-202ENST00000373556 IQSEC1Q6DN90 963 aa18.98■□□□□ 0.63
HDAC8-202ENST00000373556 KIAA1211Q6ZU35 1233 aa18.98■□□□□ 0.63
HDAC8-202ENST00000373556 CHD1LQ86WJ1 897 aa18.98■□□□□ 0.63
HDAC8-202ENST00000373556 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.98■□□□□ 0.63
HDAC8-202ENST00000373556 MORC4Q8TE76 937 aa18.98■□□□□ 0.63
HDAC8-202ENST00000373556 VTA1Q9NP79 307 aa18.98■□□□□ 0.63
HDAC8-202ENST00000373556 CD4P01730 458 aa18.97■□□□□ 0.63
HDAC8-202ENST00000373556 ACRP10323 421 aa18.97■□□□□ 0.63
HDAC8-202ENST00000373556 CALML3P27482 149 aa18.97■□□□□ 0.63
HDAC8-202ENST00000373556 CYP2C18P33260 490 aa18.97■□□□□ 0.63
HDAC8-202ENST00000373556 MFAP1P55081 439 aaKnown RBP18.97■□□□□ 0.63
HDAC8-202ENST00000373556 PSMC6P62333 389 aa18.97■□□□□ 0.63
HDAC8-202ENST00000373556 ZNF543Q08ER8 600 aa18.97■□□□□ 0.63
HDAC8-202ENST00000373556 PPIGQ13427 754 aaKnown RBP eCLIP18.97■□□□□ 0.63
HDAC8-202ENST00000373556 ITGA7Q13683 1181 aa18.97■□□□□ 0.63
HDAC8-202ENST00000373556 AAMPQ13685 434 aa18.97■□□□□ 0.63
HDAC8-202ENST00000373556 CWC27Q6UX04 472 aaKnown RBP18.97■□□□□ 0.63
HDAC8-202ENST00000373556 TMEM199Q8N511 208 aa18.97■□□□□ 0.63
HDAC8-202ENST00000373556 SLC43A3Q8NBI5 491 aa18.97■□□□□ 0.63
HDAC8-202ENST00000373556 CLEC4DQ8WXI8 215 aa18.97■□□□□ 0.63
HDAC8-202ENST00000373556 TTC14Q96N46 770 aa18.97■□□□□ 0.63
HDAC8-202ENST00000373556 ADD3Q9UEY8 706 aaKnown RBP18.97■□□□□ 0.63
HDAC8-202ENST00000373556 GRIN2DO15399 1336 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms