RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 PRKG1Q13976 671 aa12.49□□□□□ -0.41
RPRD1B-201ENST00000373433 ZNF654Q8IZM8 581 aa12.49□□□□□ -0.41
RPRD1B-201ENST00000373433 ZSCAN10Q96SZ4 725 aaPredicted RBP12.49□□□□□ -0.41
RPRD1B-201ENST00000373433 HPCAL4Q9UM19 191 aa12.49□□□□□ -0.41
RPRD1B-201ENST00000373433 CEP83Q9Y592 693 aa12.49□□□□□ -0.41
RPRD1B-201ENST00000373433 NR1I3Q14994 352 aa12.49□□□□□ -0.41
RPRD1B-201ENST00000373433 CMTR1Q8N1G2 835 aaKnown RBP12.49□□□□□ -0.41
RPRD1B-201ENST00000373433 MSL3Q8N5Y2 521 aaKnown RBP12.49□□□□□ -0.41
RPRD1B-201ENST00000373433 CDK5RAP3Q96JB5 506 aa12.49□□□□□ -0.41
RPRD1B-201ENST00000373433 NUP88Q99567 741 aaPredicted RBP12.49□□□□□ -0.41
RPRD1B-201ENST00000373433 HDAC6Q9UBN7 1215 aa12.49□□□□□ -0.41
RPRD1B-201ENST00000373433 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
RPRD1B-201ENST00000373433 CRKP46108 304 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 TNNI2P48788 182 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 TSR1Q2NL82 804 aaKnown RBP12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 KRI1Q8N9T8 703 aaKnown RBP12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 NAA15Q9BXJ9 866 aaKnown RBP12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 SIPA1L3O60292 1781 aaPredicted RBP12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 SRGAP2O75044 1071 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 MFAP3LO75121 409 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 GNAQP50148 359 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 CAPN7Q9Y6W3 813 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 AFMP43652 599 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 TNIP1Q15025 636 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 PTPAQ15257 358 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 CIAPIN1Q6FI81 312 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 RASGRP2Q7LDG7 609 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 JPH2Q9BR39 696 aaPredicted RBP12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 TRIM10Q9UDY6 481 aa12.48□□□□□ -0.41
RPRD1B-201ENST00000373433 hCG_1642624A0A1W2PR95 340 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 H7C1D1 291 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 PRPF6O94906 941 aaKnown RBP12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 MMP14P50281 582 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 FXR1P51114 621 aaKnown RBP eCLIP12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 GNGT1P63211 74 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 GRIN1Q05586 938 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 ALX1Q15699 326 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 NRAPQ86VF7 1730 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 ADAMTS7Q9UKP4 1686 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 A0A1B0GTH6 734 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 CDC25AP30304 524 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 GRIPAP1Q4V328 841 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 APOA5Q6Q788 366 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 CNGA4Q8IV77 575 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 TDRD3Q9H7E2 651 aaKnown RBP12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 SERPINB13Q9UIV8 391 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 GOLGA6BA6NDN3 693 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 CLGNO14967 610 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 KIAA0754O94854 1291 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 IRAK1P51617 712 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 NAP1L1P55209 391 aaKnown RBP12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 TMEM132AQ24JP5 1023 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 SMYD4Q8IYR2 804 aaPredicted RBP12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 COG1Q8WTW3 980 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 FAM212AQ96EL1 285 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 CAPS2Q9BXY5 557 aa12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 V9GY48 417 aaPredicted RBP12.47□□□□□ -0.41
RPRD1B-201ENST00000373433 PCP11498 1178 aaKnown RBP12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 STRIP1Q5VSL9 837 aa12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 HEATR3Q7Z4Q2 680 aa12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 SLC44A5Q8NCS7 719 aa12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 EPB41L4AQ9HCS5 686 aaPredicted RBP12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 SUFUQ9UMX1 484 aa12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 MYH14Q7Z406 1995 aaKnown RBP12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 SYNRGQ9UMZ2 1314 aa12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 CASP1P29466 404 aa12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 FKBP15Q5T1M5 1219 aa12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 WDR93Q6P2C0 686 aa12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 GBP6Q6ZN66 633 aa12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 ADGRA1Q86SQ6 560 aa12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
RPRD1B-201ENST00000373433 N4BP3O15049 544 aa12.46□□□□□ -0.42
RPRD1B-201ENST00000373433 ZNF76P36508 570 aa12.46□□□□□ -0.42
RPRD1B-201ENST00000373433 USP14P54578 494 aa12.46□□□□□ -0.42
RPRD1B-201ENST00000373433 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.42
RPRD1B-201ENST00000373433 FANCBQ8NB91 859 aa12.46□□□□□ -0.42
RPRD1B-201ENST00000373433 GIMAP7Q8NHV1 300 aa12.46□□□□□ -0.42
RPRD1B-201ENST00000373433 MED15Q96RN5 788 aa12.46□□□□□ -0.42
RPRD1B-201ENST00000373433 MMS19Q96T76 1030 aa12.46□□□□□ -0.42
RPRD1B-201ENST00000373433 VIPAS39Q9H9C1 493 aa12.46□□□□□ -0.42
RPRD1B-201ENST00000373433 DAGLAQ9Y4D2 1042 aa12.46□□□□□ -0.42
RPRD1B-201ENST00000373433 BTAF1O14981 1849 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 UBE2Q2LH0YL09 131 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 MCM3P25205 808 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 AARSP49588 968 aaKnown RBP eCLIP12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 PLCD1P51178 756 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 KCNV1Q6PIU1 500 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 CYB5R4Q7L1T6 521 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 SLC51AQ86UW1 340 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 PNMA1Q8ND90 353 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 STAG1Q8WVM7 1258 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 CSRNP1Q96S65 589 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 SELENOOQ9BVL4 669 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 VPS16Q9H269 839 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 CENPHQ9H3R5 247 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 TFR2Q9UP52 801 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 CCDC194A0A1B0GVG4 234 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms