RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 U2AF2P26368 475 aaKnown RBP eCLIP17.22■□□□□ 0.35
YIPF3-202ENST00000372422 HERVK_113P62684 666 aa17.22■□□□□ 0.35
YIPF3-202ENST00000372422 SREBF2Q12772 1141 aa17.22■□□□□ 0.35
YIPF3-202ENST00000372422 RESTQ13127 1097 aa17.22■□□□□ 0.35
YIPF3-202ENST00000372422 TNPO1Q92973 898 aaKnown RBP17.22■□□□□ 0.35
YIPF3-202ENST00000372422 SHISA4Q96DD7 197 aa17.22■□□□□ 0.35
YIPF3-202ENST00000372422 P2RX7Q99572 595 aaKnown RBP17.22■□□□□ 0.35
YIPF3-202ENST00000372422 RAVER2Q9HCJ3 691 aaKnown RBP17.22■□□□□ 0.35
YIPF3-202ENST00000372422 RIC8AQ9NPQ8 531 aa17.22■□□□□ 0.35
YIPF3-202ENST00000372422 ZNF536O15090 1300 aa17.22■□□□□ 0.35
YIPF3-202ENST00000372422 MCTP2Q6DN12 878 aa17.21■□□□□ 0.35
YIPF3-202ENST00000372422 NOSTRINQ8IVI9 506 aa17.21■□□□□ 0.35
YIPF3-202ENST00000372422 REXO1Q8N1G1 1221 aaKnown RBP17.21■□□□□ 0.35
YIPF3-202ENST00000372422 SMCR8Q8TEV9 937 aaPredicted RBP17.21■□□□□ 0.35
YIPF3-202ENST00000372422 AGBL1Q96MI9 1066 aa17.21■□□□□ 0.35
YIPF3-202ENST00000372422 PARK7Q99497 189 aaKnown RBP17.21■□□□□ 0.35
YIPF3-202ENST00000372422 TEX13BQ9BXU2 312 aa17.21■□□□□ 0.35
YIPF3-202ENST00000372422 ZCCHC17Q9NP64 241 aaKnown RBP17.21■□□□□ 0.35
YIPF3-202ENST00000372422 PARP14Q460N5 1801 aa17.2■□□□□ 0.34
YIPF3-202ENST00000372422 DEFB115Q30KQ5 88 aa17.2■□□□□ 0.34
YIPF3-202ENST00000372422 TKFCQ3LXA3 575 aa17.2■□□□□ 0.34
YIPF3-202ENST00000372422 MCF2L2Q86YR7 1114 aa17.2■□□□□ 0.34
YIPF3-202ENST00000372422 REPS2Q8NFH8 660 aa17.2■□□□□ 0.34
YIPF3-202ENST00000372422 RASSF10A6NK89 507 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 FAM155AB1AL88 458 aaPredicted RBP17.19■□□□□ 0.34
YIPF3-202ENST00000372422 ALAS1P13196 640 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 STAT3P40763 770 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 PLS1Q14651 629 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 TMEM132BQ14DG7 1078 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 NPY5RQ15761 445 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 SNRNP48Q6IEG0 339 aaKnown RBP17.19■□□□□ 0.34
YIPF3-202ENST00000372422 ZNF214Q9UL59 606 aaPredicted RBP17.19■□□□□ 0.34
YIPF3-202ENST00000372422 RABGAP1Q9Y3P9 1069 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 CCDC194A0A1B0GVG4 234 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 KIF28PB7ZC32 967 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 COPB2P35606 906 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 GCLCP48506 637 aaPredicted RBP17.19■□□□□ 0.34
YIPF3-202ENST00000372422 NOGQ13253 232 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 NR5A1Q13285 461 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 ATL3Q6DD88 541 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 KRT25Q7Z3Z0 450 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 FAM43AQ8N2R8 423 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 SAMD3Q8N6K7 520 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 OXER1Q8TDS5 423 aa17.19■□□□□ 0.34
YIPF3-202ENST00000372422 ZNF396Q96N95 335 aaPredicted RBP17.19■□□□□ 0.34
YIPF3-202ENST00000372422 NOL7Q9UMY1 257 aaKnown RBP17.19■□□□□ 0.34
YIPF3-202ENST00000372422 RLFQ13129 1914 aa17.18■□□□□ 0.34
YIPF3-202ENST00000372422 GRM1Q13255 1194 aa17.18■□□□□ 0.34
YIPF3-202ENST00000372422 CLEC17AQ6ZS10 378 aa17.18■□□□□ 0.34
YIPF3-202ENST00000372422 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
YIPF3-202ENST00000372422 TRERF1Q96PN7 1200 aa17.18■□□□□ 0.34
YIPF3-202ENST00000372422 PTPN18Q99952 460 aa17.18■□□□□ 0.34
YIPF3-202ENST00000372422 PAGR1Q9BTK6 254 aa17.18■□□□□ 0.34
YIPF3-202ENST00000372422 MAF1Q9H063 256 aa17.18■□□□□ 0.34
YIPF3-202ENST00000372422 CFAP45Q9UL16 551 aa17.18■□□□□ 0.34
YIPF3-202ENST00000372422 PCDHA6Q9UN73 950 aa17.18■□□□□ 0.34
YIPF3-202ENST00000372422 PCDHA8Q9Y5H6 950 aa17.18■□□□□ 0.34
YIPF3-202ENST00000372422 GCOM1H8Y6P7 765 aaPredicted RBP17.17■□□□□ 0.34
YIPF3-202ENST00000372422 M0R2N6 131 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 PIK3CDO00329 1044 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 POLR2MP0CAP2 368 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 CYP2C8P10632 490 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 KRT85P78386 507 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 AP3B2Q13367 1082 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 FOXD4L6Q3SYB3 417 aaPredicted RBP17.17■□□□□ 0.34
YIPF3-202ENST00000372422 RILPL1Q5EBL4 403 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 L1TD1Q5T7N2 865 aaKnown RBP17.17■□□□□ 0.34
YIPF3-202ENST00000372422 MYSM1Q5VVJ2 828 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 CYP4F22Q6NT55 531 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 FOXD4L3Q6VB84 417 aaPredicted RBP17.17■□□□□ 0.34
YIPF3-202ENST00000372422 TNFRSF25Q93038 417 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 SPATC1LQ9H0A9 340 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 HOMER2Q9NSB8 354 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 RNF146Q9NTX7 359 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 MAP3K20Q9NYL2 800 aaKnown RBP17.17■□□□□ 0.34
YIPF3-202ENST00000372422 BIN2Q9UBW5 565 aaPredicted RBP17.17■□□□□ 0.34
YIPF3-202ENST00000372422 FBXO40Q9UH90 709 aa17.17■□□□□ 0.34
YIPF3-202ENST00000372422 SLC25A27O95847 323 aa17.16■□□□□ 0.34
YIPF3-202ENST00000372422 CFBP00751 764 aa17.16■□□□□ 0.34
YIPF3-202ENST00000372422 FOSP01100 380 aaPredicted RBP17.16■□□□□ 0.34
YIPF3-202ENST00000372422 NCLP19338 710 aaKnown RBP17.16■□□□□ 0.34
YIPF3-202ENST00000372422 NONOQ15233 471 aaKnown RBP eCLIP17.16■□□□□ 0.34
YIPF3-202ENST00000372422 SKOR2Q2VWA4 1001 aaPredicted RBP17.16■□□□□ 0.34
YIPF3-202ENST00000372422 PIK3AP1Q6ZUJ8 805 aa17.16■□□□□ 0.34
YIPF3-202ENST00000372422 IFNL1Q8IU54 200 aa17.16■□□□□ 0.34
YIPF3-202ENST00000372422 RIOX2Q8IUF8 465 aa17.16■□□□□ 0.34
YIPF3-202ENST00000372422 CHST13Q8NET6 341 aa17.16■□□□□ 0.34
YIPF3-202ENST00000372422 CAPNS2Q96L46 248 aa17.16■□□□□ 0.34
YIPF3-202ENST00000372422 ACAD9Q9H845 621 aa17.16■□□□□ 0.34
YIPF3-202ENST00000372422 BTBD7Q9P203 1132 aa17.16■□□□□ 0.34
YIPF3-202ENST00000372422 A0A0G2JMZ2 1700 aa17.16■□□□□ 0.34
YIPF3-202ENST00000372422 SPDYE3A6NKU9 549 aa17.15■□□□□ 0.34
YIPF3-202ENST00000372422 TAL1P17542 331 aaPredicted RBP17.15■□□□□ 0.34
YIPF3-202ENST00000372422 TRAPPC10P48553 1259 aa17.15■□□□□ 0.34
YIPF3-202ENST00000372422 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
YIPF3-202ENST00000372422 CCNA1P78396 465 aa17.15■□□□□ 0.34
YIPF3-202ENST00000372422 JAKMIP3Q5VZ66 844 aa17.15■□□□□ 0.34
YIPF3-202ENST00000372422 RASGRP4Q8TDF6 673 aa17.15■□□□□ 0.34
YIPF3-202ENST00000372422 EHMT1Q9H9B1 1298 aa17.15■□□□□ 0.34
YIPF3-202ENST00000372422 RBPJLQ9UBG7 517 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms