RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 PHKA1P46020 1223 aa24.26■■□□□ 1.47
TM9SF3-201ENST00000371142 MCTP2Q6DN12 878 aa24.26■■□□□ 1.47
TM9SF3-201ENST00000371142 PALM3A6NDB9 673 aaPredicted RBP24.26■■□□□ 1.47
TM9SF3-201ENST00000371142 MAP7Q14244 749 aa24.26■■□□□ 1.47
TM9SF3-201ENST00000371142 LRRC8AQ8IWT6 810 aa24.26■■□□□ 1.47
TM9SF3-201ENST00000371142 CACYBPQ9HB71 228 aaKnown RBP24.26■■□□□ 1.47
TM9SF3-201ENST00000371142 PCCAP05165 728 aaPredicted RBP24.26■■□□□ 1.47
TM9SF3-201ENST00000371142 SPATA1Q5VX52 437 aa24.26■■□□□ 1.47
TM9SF3-201ENST00000371142 UBXN2AP68543 259 aa24.25■■□□□ 1.47
TM9SF3-201ENST00000371142 FAM26FQ5R3K3 315 aa24.25■■□□□ 1.47
TM9SF3-201ENST00000371142 TRIML1Q8N9V2 468 aa24.25■■□□□ 1.47
TM9SF3-201ENST00000371142 HESX1Q9UBX0 185 aa24.25■■□□□ 1.47
TM9SF3-201ENST00000371142 CCDC38Q502W7 563 aa24.25■■□□□ 1.47
TM9SF3-201ENST00000371142 PUS3Q9BZE2 481 aaKnown RBP24.25■■□□□ 1.47
TM9SF3-201ENST00000371142 KIAA1024Q9UPX6 916 aa24.25■■□□□ 1.47
TM9SF3-201ENST00000371142 GALNT17Q6IS24 598 aa24.25■■□□□ 1.47
TM9SF3-201ENST00000371142 CHAMP1Q96JM3 812 aa24.25■■□□□ 1.47
TM9SF3-201ENST00000371142 KLHL14Q9P2G3 628 aa24.25■■□□□ 1.47
TM9SF3-201ENST00000371142 GOLGA8KD6RF30 607 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 ATF2P15336 505 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 C4orf50Q6ZRC1 276 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 ANKRD13CQ8N6S4 541 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 GBP7Q8N8V2 638 aaPredicted RBP24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 GPT2Q8TD30 523 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 POMGNT1Q8WZA1 660 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 RABGAP1Q9Y3P9 1069 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 EFCC1Q9HA90 598 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 ABCB5Q2M3G0 1257 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 TBC1D10BQ4KMP7 808 aaPredicted RBP24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 HAUS1Q96CS2 278 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 PCDHA1Q9Y5I3 950 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 BLMP54132 1417 aaPredicted RBP24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 LONP1P36776 959 aaKnown RBP24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 RASSF2P50749 326 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 APOL6Q9BWW8 343 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 PTPRTO14522 1441 aa24.24■■□□□ 1.47
TM9SF3-201ENST00000371142 MYL7Q01449 175 aa24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 RASSF7Q02833 373 aa24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 BFSP1Q12934 665 aa24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 USPL1Q5W0Q7 1092 aa24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 SPICE1Q8N0Z3 855 aa24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 CNOT6LQ96LI5 555 aaKnown RBP24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 PTPN22Q9Y2R2 807 aa24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 CFAP43Q8NDM7 1665 aa24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 DCAF15Q66K64 600 aa24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 LARSQ9P2J5 1176 aaKnown RBP24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 FAM193BQ96PV7 902 aaPredicted RBP24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 HOMER3Q9NSC5 361 aa24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 H2AFZP0C0S5 128 aa24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 COPB1P53618 953 aaKnown RBP24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 H2AFVQ71UI9 128 aa24.23■■□□□ 1.47
TM9SF3-201ENST00000371142 RFC1P35251 1148 aaPredicted RBP24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 TTBK2Q6IQ55 1244 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 METTL14Q9HCE5 456 aaKnown RBP24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 TLR7Q9NYK1 1049 aaKnown RBP24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 ZNF804BA4D1E1 1349 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 EXOC3L4Q17RC7 722 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 ZNF148Q9UQR1 794 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 H0YCG3 227 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 GSTA1P08263 222 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 GSTA2P09210 222 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 KIF11P52732 1056 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 RBM6P78332 1123 aaKnown RBP24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 DISC1Q9NRI5 854 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 M0R2C6 588 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 ODR4Q5SWX8 454 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 RTEL1Q9NZ71 1219 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 SEPT9Q9UHD8 586 aaPredicted RBP24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 MAD1L1Q9Y6D9 718 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 RASGRP4Q8TDF6 673 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 MAP3K15Q6ZN16 1313 aa24.22■■□□□ 1.47
TM9SF3-201ENST00000371142 EHHADHQ08426 723 aa24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 GOLGA8FQ08AF8 430 aa24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 GOLGA8DPQ0D2H9 430 aa24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 KRT26Q7Z3Y9 468 aa24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 NSFP46459 744 aaKnown RBP24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 CPSF2Q9P2I0 782 aaKnown RBP24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 DNMT1P26358 1616 aaKnown RBP24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 RBBP5Q15291 538 aaKnown RBP24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 EP400NLQ6ZTU2 488 aa24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 RAB3IPQ96QF0 476 aaPredicted RBP24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 CAPN7Q9Y6W3 813 aa24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 PLXNC1O60486 1568 aa24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 ADCK5Q3MIX3 580 aa24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 HAUS4Q9H6D7 363 aa24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 TCP1P17987 556 aaKnown RBP24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 PLCB4Q15147 1175 aa24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 LSG1Q9H089 658 aaKnown RBP24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 EPN1Q9Y6I3 576 aaPredicted RBP24.21■■□□□ 1.47
TM9SF3-201ENST00000371142 RGS12O14924 1447 aa24.2■■□□□ 1.47
TM9SF3-201ENST00000371142 H7C0C1 242 aa24.2■■□□□ 1.47
TM9SF3-201ENST00000371142 CLGNO14967 610 aa24.2■■□□□ 1.47
TM9SF3-201ENST00000371142 ATP5OP48047 213 aa24.2■■□□□ 1.47
TM9SF3-201ENST00000371142 MUM1Q2TAK8 710 aa24.2■■□□□ 1.47
TM9SF3-201ENST00000371142 NRBP2Q9NSY0 501 aa24.2■■□□□ 1.47
TM9SF3-201ENST00000371142 TYW1Q9NV66 732 aaKnown RBP24.2■■□□□ 1.47
TM9SF3-201ENST00000371142 CLRN2A0PK11 232 aa24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 BAG2O95816 211 aa24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 PDZD4Q76G19 769 aaPredicted RBP24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 PGBD1Q96JS3 809 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms