RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 FBXL16Q8N461 479 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 NCOA7Q8NI08 942 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 KRT12Q99456 494 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 NDST4Q9H3R1 872 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 COPRSQ9NQ92 184 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 STRN4Q9NRL3 753 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 SLC5A4Q9NY91 659 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 GGA2Q9UJY4 613 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 SRPRBQ9Y5M8 271 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 USP6P35125 1406 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 DNAJC8O75937 253 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 DRD4P21917 467 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 VAV2P52735 878 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 TRIM29Q14134 588 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 SCARF1Q14162 830 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 PTPROQ16827 1216 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 NBPF9Q3BBW0 867 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 ELOA2Q8IYF1 753 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 KIF2BQ8N4N8 673 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 NEUROG2Q9H2A3 272 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 GDF3Q9NR23 364 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 MED1Q15648 1581 aaPredicted RBP10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 DPPA5A6NC42 116 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 IFIT1P09914 478 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 GNAT1P11488 350 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 PRCPP42785 496 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 SLC5A9Q2M3M2 681 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 LRRC24Q50LG9 513 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 GLE1Q53GS7 698 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 LMCD1Q9NZU5 365 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 CAPN11Q9UMQ6 739 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 NOVA2Q9UNW9 492 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 CPDO75976 1380 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 ANO9A1A5B4 782 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 GOLGA8AA7E2F4 631 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 H0YGN5 161 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 MMP1P03956 469 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 HSD17B3P37058 310 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 SSR1P43307 286 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 KRT83P78385 493 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 KIF5AQ12840 1032 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 TRAF1Q13077 416 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 ODF2Q5BJF6 829 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 TRIM68Q6AZZ1 485 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 TYW1BQ6NUM6 668 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 NFXL1Q6ZNB6 911 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 CPLX4Q7Z7G2 160 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 CCDC63Q8NA47 563 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZNF507Q8TCN5 953 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 NOC3LQ8WTT2 800 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZKSCAN3Q9BRR0 538 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 TLR10Q9BXR5 811 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 ANGEL1Q9UNK9 670 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 TRIM33Q9UPN9 1127 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 NFS1Q9Y697 457 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 TACC3Q9Y6A5 838 aa10.44□□□□□ -0.74
HMGCLL1-204ENST00000370852 MYH7P12883 1935 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 A6NNZ2 444 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 HMGB1P1B2RPK0 211 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZNF213O14771 459 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 SEMA3EO15041 775 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 EPHB6O15197 1021 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 TRIM37O94972 964 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 ATP4AP20648 1035 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZNF844Q08AG5 666 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 PAK1Q13153 545 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 TUBB8Q3ZCM7 444 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 IQCEQ6IPM2 695 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 ATG9AQ7Z3C6 839 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 KLHL7Q8IXQ5 586 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 TRIM58Q8NG06 486 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 MTMR8Q96EF0 704 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 ABCF3Q9NUQ8 709 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 NALCNQ8IZF0 1738 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 SPDYE3A6NKU9 549 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 CCT8L1PA6NM43 557 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 HGSO14964 777 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 PYGBP11216 843 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 ADORA1P30542 326 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 CTCFP49711 727 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 ALDH5A1P51649 535 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 MAGOHP61326 146 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 CTDSPL2Q05D32 466 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 IFFO1Q0D2I5 559 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 PAK2Q13177 524 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 MEA1Q16626 185 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 LMBR1LQ6UX01 489 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZNF572Q7Z3I7 529 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 NBPF5PQ86XG9 351 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 CD302Q8IX05 232 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 XAGE3Q8WTP9 111 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 NUP133Q8WUM0 1156 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 CCDC47Q96A33 483 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 MAGOHBQ96A72 148 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 PUS3Q9BZE2 481 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 SH2D4AQ9H788 454 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 BATF3Q9NR55 127 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 BABAM1Q9NWV8 329 aa10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 CORO1CQ9ULV4 474 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-204ENST00000370852 C5orf60A6NFR6 353 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms