RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 MKRN3Q13064 507 aaKnown RBP19.76■□□□□ 0.75
UBE3D-203ENST00000369747 STX1AQ16623 288 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 SH3D19Q5HYK7 790 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 BTNL9Q6UXG8 535 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 C12orf42Q96LP6 360 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 TANGO6Q9C0B7 1094 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 RPAP3Q9H6T3 665 aaPredicted RBP19.76■□□□□ 0.75
UBE3D-203ENST00000369747 KCNH4Q9UQ05 1017 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 ZKSCAN5Q9Y2L8 839 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 A0A0G2JLL6 359 aaPredicted RBP19.76■□□□□ 0.75
UBE3D-203ENST00000369747 ZNF202O95125 648 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 MSNP26038 577 aaKnown RBP19.76■□□□□ 0.75
UBE3D-203ENST00000369747 PLCB2Q00722 1185 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 C11orf57Q6ZUT1 292 aaPredicted RBP19.76■□□□□ 0.75
UBE3D-203ENST00000369747 PRRT2Q7Z6L0 340 aaPredicted RBP19.76■□□□□ 0.75
UBE3D-203ENST00000369747 SAPCD2Q86UD0 394 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 TMOD4Q9NZQ9 345 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 VPS54Q9P1Q0 977 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 PRR12Q9ULL5 1215 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.75■□□□□ 0.75
UBE3D-203ENST00000369747 PTMAP06454 111 aaKnown RBP19.75■□□□□ 0.75
UBE3D-203ENST00000369747 SCG2P13521 617 aa19.75■□□□□ 0.75
UBE3D-203ENST00000369747 PFKFB3Q16875 520 aaPredicted RBP19.75■□□□□ 0.75
UBE3D-203ENST00000369747 TREML2Q5T2D2 321 aa19.75■□□□□ 0.75
UBE3D-203ENST00000369747 SYDE2Q5VT97 1194 aa19.75■□□□□ 0.75
UBE3D-203ENST00000369747 SHC4Q6S5L8 630 aa19.75■□□□□ 0.75
UBE3D-203ENST00000369747 GPKOWQ92917 476 aaPredicted RBP eCLIP19.75■□□□□ 0.75
UBE3D-203ENST00000369747 KIFC2Q96AC6 838 aa19.75■□□□□ 0.75
UBE3D-203ENST00000369747 RRP36Q96EU6 259 aaKnown RBP19.75■□□□□ 0.75
UBE3D-203ENST00000369747 SDF4Q9BRK5 362 aa19.75■□□□□ 0.75
UBE3D-203ENST00000369747 PHF20Q9BVI0 1012 aa19.75■□□□□ 0.75
UBE3D-203ENST00000369747 HPSEQ9Y251 543 aa19.75■□□□□ 0.75
UBE3D-203ENST00000369747 FAM237AA0A1B0GTK4 181 aa19.74■□□□□ 0.75
UBE3D-203ENST00000369747 CXCL11O14625 94 aa19.74■□□□□ 0.75
UBE3D-203ENST00000369747 XBP1P17861 261 aa19.74■□□□□ 0.75
UBE3D-203ENST00000369747 RILPL1Q5EBL4 403 aa19.74■□□□□ 0.75
UBE3D-203ENST00000369747 ERCC4Q92889 916 aaPredicted RBP19.74■□□□□ 0.75
UBE3D-203ENST00000369747 WNK4Q96J92 1243 aa19.74■□□□□ 0.75
UBE3D-203ENST00000369747 FEM1BQ9UK73 627 aa19.74■□□□□ 0.75
UBE3D-203ENST00000369747 CUTAO60888 179 aa19.74■□□□□ 0.75
UBE3D-203ENST00000369747 IQCB1Q15051 598 aa19.74■□□□□ 0.75
UBE3D-203ENST00000369747 RESP18Q5W5W9 173 aa19.74■□□□□ 0.75
UBE3D-203ENST00000369747 CHURC1Q8WUH1 139 aa19.74■□□□□ 0.75
UBE3D-203ENST00000369747 MTMR8Q96EF0 704 aa19.74■□□□□ 0.75
UBE3D-203ENST00000369747 CLIC6Q96NY7 704 aa19.74■□□□□ 0.75
UBE3D-203ENST00000369747 SEC63Q9UGP8 760 aaKnown RBP19.74■□□□□ 0.75
UBE3D-203ENST00000369747 A0A087WWV3 80 aa19.73■□□□□ 0.75
UBE3D-203ENST00000369747 PPP1R11O60927 126 aaPredicted RBP19.73■□□□□ 0.75
UBE3D-203ENST00000369747 FLOT1O75955 427 aa19.73■□□□□ 0.75
UBE3D-203ENST00000369747 MOGSQ13724 837 aa19.73■□□□□ 0.75
UBE3D-203ENST00000369747 GADL1Q6ZQY3 521 aa19.73■□□□□ 0.75
UBE3D-203ENST00000369747 KIAA1468Q9P260 1216 aa19.73■□□□□ 0.75
UBE3D-203ENST00000369747 ZBTB5O15062 677 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 PLA2G6O60733 806 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 CDC37Q16543 378 aaPredicted RBP19.72■□□□□ 0.75
UBE3D-203ENST00000369747 WWC2Q6AWC2 1192 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 TYW1BQ6NUM6 668 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 HEATR3Q7Z4Q2 680 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 ANO10Q9NW15 660 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 PNMA6FA0A0J9YX94 578 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 KRT2P35908 639 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 NPY5RQ15761 445 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 QRICH1Q2TAL8 776 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 FAM160B2Q86V87 743 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 PRPF38AQ8NAV1 312 aaKnown RBP19.72■□□□□ 0.75
UBE3D-203ENST00000369747 TIGD1Q96MW7 591 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 SLF1Q9BQI6 1058 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 PCDHB6Q9Y5E3 794 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 LOC285556D6RIA3 1793 aa19.72■□□□□ 0.75
UBE3D-203ENST00000369747 PARP14Q460N5 1801 aa19.71■□□□□ 0.75
UBE3D-203ENST00000369747 SYKP43405 635 aa19.71■□□□□ 0.75
UBE3D-203ENST00000369747 ZNF157P51786 506 aaPredicted RBP19.71■□□□□ 0.75
UBE3D-203ENST00000369747 FSTL1Q12841 308 aa19.71■□□□□ 0.75
UBE3D-203ENST00000369747 SNAPC2Q13487 334 aa19.71■□□□□ 0.75
UBE3D-203ENST00000369747 SPRYD7Q5W111 196 aa19.71■□□□□ 0.75
UBE3D-203ENST00000369747 CATSPERGQ6ZRH7 1159 aa19.71■□□□□ 0.75
UBE3D-203ENST00000369747 KRI1Q8N9T8 703 aaKnown RBP19.71■□□□□ 0.75
UBE3D-203ENST00000369747 PROCA1Q8NCQ7 364 aaPredicted RBP19.71■□□□□ 0.75
UBE3D-203ENST00000369747 MS4A4AQ96JQ5 239 aa19.71■□□□□ 0.75
UBE3D-203ENST00000369747 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.71■□□□□ 0.75
UBE3D-203ENST00000369747 RLFQ13129 1914 aa19.71■□□□□ 0.75
UBE3D-203ENST00000369747 FAM205CA6NFA0 338 aa19.7■□□□□ 0.74
UBE3D-203ENST00000369747 TAL1P17542 331 aaPredicted RBP19.7■□□□□ 0.74
UBE3D-203ENST00000369747 EARS2Q5JPH6 523 aaKnown RBP19.7■□□□□ 0.74
UBE3D-203ENST00000369747 COA7Q96BR5 231 aa19.7■□□□□ 0.74
UBE3D-203ENST00000369747 BARHL2Q9NY43 387 aa19.7■□□□□ 0.74
UBE3D-203ENST00000369747 FBXO2Q9UK22 296 aaPredicted RBP19.7■□□□□ 0.74
UBE3D-203ENST00000369747 PPP1R9AQ9ULJ8 1098 aa19.7■□□□□ 0.74
UBE3D-203ENST00000369747 ABT1Q9ULW3 272 aaKnown RBP19.7■□□□□ 0.74
UBE3D-203ENST00000369747 TLL2Q9Y6L7 1015 aa19.7■□□□□ 0.74
UBE3D-203ENST00000369747 TMEM88BA6NKF7 163 aa19.7■□□□□ 0.74
UBE3D-203ENST00000369747 STXBP3O00186 592 aa19.7■□□□□ 0.74
UBE3D-203ENST00000369747 ZNF500O60304 480 aaPredicted RBP19.7■□□□□ 0.74
UBE3D-203ENST00000369747 SMCHD1A6NHR9 2005 aa19.7■□□□□ 0.74
UBE3D-203ENST00000369747 USP17L15C9J2P7 530 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 USP17L13C9JLJ4 530 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 USP17L11C9JVI0 530 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 USP17L18D6R9N7 530 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 USP17L22D6RA61 530 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 USP17L17D6RBQ6 530 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms