RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 IL17RBQ9NRM6 502 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 RMND1Q9NWS8 449 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 PACSIN2Q9UNF0 486 aaPredicted RBP14.42□□□□□ -0.1
CHD1L-202ENST00000369258 SAMM50Q9Y512 469 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 UBR2Q8IWV8 1755 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 PSMD14O00487 310 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 MAGEA9P43362 315 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 SF3A3Q12874 501 aaKnown RBP eCLIP14.41□□□□□ -0.11e-23■■■■□ 23.4
CHD1L-202ENST00000369258 SH2D3CQ8N5H7 860 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 CRACR2AQ9BSW2 395 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 GOLPH3Q9H4A6 298 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 DISC1Q9NRI5 854 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 PLCG1P19174 1290 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 MTIF2P46199 727 aaKnown RBP14.41□□□□□ -0.1
CHD1L-202ENST00000369258 STIM1Q13586 685 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 TXNRD1Q16881 649 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 FAM182BQ5T319 152 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 PACS2Q86VP3 889 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 C4orf32Q8N8J7 132 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 SMARCC1Q92922 1105 aaPredicted RBP14.41□□□□□ -0.1
CHD1L-202ENST00000369258 PYM1Q9BRP8 204 aaKnown RBP14.41□□□□□ -0.1
CHD1L-202ENST00000369258 TBC1D7Q9P0N9 293 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 HPCAL4Q9UM19 191 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 NUP98P52948 1817 aa14.41□□□□□ -0.1
CHD1L-202ENST00000369258 H7C1D1 291 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 AARSP49588 968 aaKnown RBP eCLIP14.4□□□□□ -0.1
CHD1L-202ENST00000369258 EIF6P56537 245 aaKnown RBP14.4□□□□□ -0.1
CHD1L-202ENST00000369258 C2CD5Q86YS7 1000 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 BLIDQ8IZY5 108 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 ADSSL1Q8N142 457 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 DUSP9Q99956 384 aaKnown RBP14.4□□□□□ -0.1
CHD1L-202ENST00000369258 STRCP1A6NGW2 1772 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 ZNF335Q9H4Z2 1342 aaPredicted RBP14.4□□□□□ -0.1
CHD1L-202ENST00000369258 AGPSO00116 658 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 KLRC4O43908 158 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 CACNB1Q02641 598 aaPredicted RBP14.4□□□□□ -0.1
CHD1L-202ENST00000369258 CKAP4Q07065 602 aaKnown RBP14.4□□□□□ -0.1
CHD1L-202ENST00000369258 PDE4DQ08499 809 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 TTC31Q49AM3 519 aaPredicted RBP14.4□□□□□ -0.1
CHD1L-202ENST00000369258 SELENOOQ9BVL4 669 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 CCDC194A0A1B0GVG4 234 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 PPFIA4O75335 1185 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 IPO7O95373 1038 aaKnown RBP14.4□□□□□ -0.1
CHD1L-202ENST00000369258 ATP1A2P50993 1020 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 ASIC1P78348 528 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 KRT83P78385 493 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 DTHD1Q6ZMT9 781 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 SND1Q7KZF4 910 aaKnown RBP eCLIP14.4□□□□□ -0.1
CHD1L-202ENST00000369258 CNOT6LQ96LI5 555 aaKnown RBP14.4□□□□□ -0.1
CHD1L-202ENST00000369258 UBA5Q9GZZ9 404 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 MMRN2Q9H8L6 949 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 NLRC4Q9NPP4 1024 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 TMEM260Q9NX78 707 aa14.4□□□□□ -0.1
CHD1L-202ENST00000369258 MYH3P11055 1940 aa14.39□□□□□ -0.11
CHD1L-202ENST00000369258 CCNT1O60563 726 aaKnown RBP14.39□□□□□ -0.11
CHD1L-202ENST00000369258 NTSR2O95665 410 aa14.39□□□□□ -0.11
CHD1L-202ENST00000369258 NOP2P46087 812 aaKnown RBP14.39□□□□□ -0.11
CHD1L-202ENST00000369258 NAP1L1P55209 391 aaKnown RBP14.39□□□□□ -0.11
CHD1L-202ENST00000369258 PNMA1Q8ND90 353 aa14.39□□□□□ -0.11
CHD1L-202ENST00000369258 NSUN4Q96CB9 384 aaKnown RBP14.39□□□□□ -0.11
CHD1L-202ENST00000369258 KAT14Q9H8E8 782 aa14.39□□□□□ -0.11
CHD1L-202ENST00000369258 RBM28Q9NW13 759 aaKnown RBP14.39□□□□□ -0.11
CHD1L-202ENST00000369258 MINPP1Q9UNW1 487 aa14.39□□□□□ -0.11
CHD1L-202ENST00000369258 EXOC5O00471 708 aa14.39□□□□□ -0.11
CHD1L-202ENST00000369258 KRT86O43790 486 aa14.39□□□□□ -0.11
CHD1L-202ENST00000369258 CAMTA2O94983 1202 aa14.39□□□□□ -0.11
CHD1L-202ENST00000369258 IBSPP21815 317 aaPredicted RBP14.39□□□□□ -0.11
CHD1L-202ENST00000369258 CCT5P48643 541 aa14.39□□□□□ -0.11
CHD1L-202ENST00000369258 USP17L2Q6R6M4 530 aa14.39□□□□□ -0.11
CHD1L-202ENST00000369258 EHBP1Q8NDI1 1231 aa14.39□□□□□ -0.11
CHD1L-202ENST00000369258 ZNF507Q8TCN5 953 aa14.39□□□□□ -0.11
CHD1L-202ENST00000369258 NOC4LQ9BVI4 516 aaKnown RBP14.39□□□□□ -0.11
CHD1L-202ENST00000369258 MAGEC2Q9UBF1 373 aaPredicted RBP14.39□□□□□ -0.11
CHD1L-202ENST00000369258 CICQ96RK0 1608 aaPredicted RBP14.39□□□□□ -0.11
CHD1L-202ENST00000369258 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.38□□□□□ -0.11
CHD1L-202ENST00000369258 LGALS16A8MUM7 142 aa14.38□□□□□ -0.11
CHD1L-202ENST00000369258 IL6STP40189 918 aaPredicted RBP14.38□□□□□ -0.11
CHD1L-202ENST00000369258 TXKP42681 527 aa14.38□□□□□ -0.11
CHD1L-202ENST00000369258 CORO7P57737 925 aa14.38□□□□□ -0.11
CHD1L-202ENST00000369258 PFKFB3Q16875 520 aaPredicted RBP14.38□□□□□ -0.11
CHD1L-202ENST00000369258 PAPD7Q5XG87 772 aaKnown RBP14.38□□□□□ -0.11
CHD1L-202ENST00000369258 RPGRIP1Q96KN7 1286 aa14.38□□□□□ -0.11
CHD1L-202ENST00000369258 ZNHIT6Q9NWK9 470 aaKnown RBP14.38□□□□□ -0.11
CHD1L-202ENST00000369258 BIN2Q9UBW5 565 aaPredicted RBP14.38□□□□□ -0.11
CHD1L-202ENST00000369258 ZC3H4Q9UPT8 1303 aaKnown RBP14.38□□□□□ -0.11
CHD1L-202ENST00000369258 ZNF142P52746 1687 aaPredicted RBP14.38□□□□□ -0.11
CHD1L-202ENST00000369258 PRPF6O94906 941 aaKnown RBP14.38□□□□□ -0.11
CHD1L-202ENST00000369258 GFPT1Q06210 699 aaPredicted RBP14.38□□□□□ -0.11
CHD1L-202ENST00000369258 TTI2Q6NXR4 508 aa14.38□□□□□ -0.11
CHD1L-202ENST00000369258 DNAJC7Q99615 494 aa14.38□□□□□ -0.11
CHD1L-202ENST00000369258 PCDHA6Q9UN73 950 aa14.38□□□□□ -0.11
CHD1L-202ENST00000369258 PCDHA8Q9Y5H6 950 aa14.38□□□□□ -0.11
CHD1L-202ENST00000369258 PARP4Q9UKK3 1724 aaKnown RBP14.38□□□□□ -0.11
CHD1L-202ENST00000369258 TARSL2A2RTX5 802 aaKnown RBP14.37□□□□□ -0.11
CHD1L-202ENST00000369258 KRT14P02533 472 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 CYLC1P35663 651 aaPredicted RBP14.37□□□□□ -0.11
CHD1L-202ENST00000369258 LIG3P49916 1009 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 ANKRD18AQ8IVF6 992 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 MAPKAPK5Q8IW41 473 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 TSEN2Q8NCE0 465 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms