RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 VPS54Q9P1Q0 977 aa11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 DMGDHQ9UI17 866 aaKnown RBP11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 MCM8Q9UJA3 840 aa11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 HYOU1Q9Y4L1 999 aa11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 RREB1Q92766 1687 aa11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 USO1O60763 962 aaKnown RBP11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 CSF1RP07333 972 aa11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 ARID4AP29374 1257 aaPredicted RBP11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 LSP1P33241 339 aa11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 RDXP35241 583 aaKnown RBP11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 CTDSPL2Q05D32 466 aa11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 TTC38Q5R3I4 469 aa11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 NAA35Q5VZE5 725 aa11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 TNFRSF25Q93038 417 aa11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 TACC3Q9Y6A5 838 aa11.72□□□□□ -0.53
LYSMD1-201ENST00000368908 ITGB4P16144 1822 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 FAM205CA6NFA0 338 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 MYO1FO00160 1098 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 UQCRFS1P1P0C7P4 283 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 PRCPP42785 496 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 TRAPPC10P48553 1259 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 KCNB1Q14721 858 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 PTGISQ16647 500 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 WLSQ5T9L3 541 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 GIMAP7Q8NHV1 300 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 ZNF473Q8WTR7 871 aaKnown RBP11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 ZKSCAN4Q969J2 545 aaPredicted RBP11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 SHISA4Q96DD7 197 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 ZIM3Q96PE6 472 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 SH2D4AQ9H788 454 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 ACTR5Q9H9F9 607 aaPredicted RBP11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 MAGEC2Q9UBF1 373 aaPredicted RBP11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 KCPQ6ZWJ8 1503 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 PRPF3O43395 683 aaKnown RBP11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 RASSF9O75901 435 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 TRIM28Q13263 835 aaKnown RBP11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 EZH2Q15910 746 aaKnown RBP11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 MAGEC3Q8TD91 643 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 MTRQ99707 1265 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 BLZF1Q9H2G9 400 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 EXOC1Q9NV70 894 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 RIPOR2Q9Y4F9 1068 aa11.71□□□□□ -0.53
LYSMD1-201ENST00000368908 LRP5O75197 1615 aa11.71□□□□□ -0.54
LYSMD1-201ENST00000368908 PPP1R37O75864 691 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 IDH1O75874 414 aaKnown RBP11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 PCCAP05165 728 aaPredicted RBP11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 MYL1P05976 194 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 HNRNPH3P31942 346 aaKnown RBP11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 CABP4P57796 275 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 PKN1Q16512 942 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 EARS2Q5JPH6 523 aaKnown RBP11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 CCDC50Q8IVM0 306 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 IQCKQ8N0W5 287 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 HDAC7Q8WUI4 952 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 OSBPL9Q96SU4 736 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 JPH2Q9BR39 696 aaPredicted RBP11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 RNF14Q9UBS8 474 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 TFR2Q9UP52 801 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 BTAF1O14981 1849 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 COBLO75128 1261 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 LCA5LO95447 670 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 GNAT2P19087 354 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 ELF1P32519 619 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 PAK2Q13177 524 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 IFIT5Q13325 482 aaKnown RBP11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 SPA17Q15506 151 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 METTL24Q5JXM2 366 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 C6orf89Q6UWU4 347 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 ALS2CR12Q96Q35 445 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 RNF41Q9H4P4 317 aaPredicted RBP11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 GDF3Q9NR23 364 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 KLC4Q9NSK0 619 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 TSKSQ9UJT2 592 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 GDAQ9Y2T3 454 aa11.7□□□□□ -0.54
LYSMD1-201ENST00000368908 MACROD2A1Z1Q3 448 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 HMGB1P1B2RPK0 211 aaPredicted RBP11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 SOCS7O14512 581 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 NR1D1P20393 614 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 PAFAH1B1P43034 410 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 PTGDRQ13258 359 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 CCDC40Q4G0X9 1142 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 CFAP58Q5T655 872 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 ARL6IP4Q66PJ3 421 aaKnown RBP11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 PPP4R3AQ6IN85 833 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 C8orf74Q6P047 294 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 IFT20Q8IY31 132 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 MYCBPAPQ8TBZ2 947 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 STAMQ92783 540 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 UPF1Q92900 1129 aaKnown RBP eCLIP11.69□□□□□ -0.545e-7■■■■□ 19.7
LYSMD1-201ENST00000368908 RABEP2Q9H5N1 569 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 INCENPQ9NQS7 918 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 PNPLA7Q6ZV29 1317 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 PSMA7O14818 248 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 FAM107AO95990 144 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 TRIM21P19474 475 aaKnown RBP11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 LONP1P36776 959 aaKnown RBP11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 FUT2Q10981 343 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 TCIRG1Q13488 830 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 TTC19Q6DKK2 380 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms