RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 TMX4Q9H1E5 349 aaPredicted RBP20.41■□□□□ 0.86
LMNA-207ENST00000368301 LIMA1Q9UHB6 759 aaKnown RBP20.41■□□□□ 0.86
LMNA-207ENST00000368301 DNAI1Q9UI46 699 aa20.41■□□□□ 0.86
LMNA-207ENST00000368301 SLX4Q8IY92 1834 aa20.41■□□□□ 0.86
LMNA-207ENST00000368301 DDTLA6NHG4 134 aaPredicted RBP20.41■□□□□ 0.86
LMNA-207ENST00000368301 TXKP42681 527 aa20.41■□□□□ 0.86
LMNA-207ENST00000368301 ETF1P62495 437 aaKnown RBP20.41■□□□□ 0.86
LMNA-207ENST00000368301 CCDC96Q2M329 555 aa20.41■□□□□ 0.86
LMNA-207ENST00000368301 MTERF4Q7Z6M4 381 aaKnown RBP20.41■□□□□ 0.86
LMNA-207ENST00000368301 IRF2BP1Q8IU81 584 aa20.41■□□□□ 0.86
LMNA-207ENST00000368301 MYH4Q9Y623 1939 aa20.4■□□□□ 0.86
LMNA-207ENST00000368301 SOWAHDA6NJG2 315 aa20.4■□□□□ 0.86
LMNA-207ENST00000368301 USP17L10C9JJH3 530 aa20.4■□□□□ 0.86
LMNA-207ENST00000368301 HLA-DOAP06340 250 aa20.4■□□□□ 0.86
LMNA-207ENST00000368301 SH3BP5LQ7L8J4 393 aa20.4■□□□□ 0.86
LMNA-207ENST00000368301 PODNQ7Z5L7 613 aa20.4■□□□□ 0.86
LMNA-207ENST00000368301 ZDHHC15Q96MV8 337 aa20.4■□□□□ 0.86
LMNA-207ENST00000368301 SIPA1L1O43166 1804 aa20.4■□□□□ 0.86
LMNA-207ENST00000368301 KCNJ18B7U540 433 aa20.39■□□□□ 0.86
LMNA-207ENST00000368301 RBM5P52756 815 aaKnown RBP eCLIP20.39■□□□□ 0.86
LMNA-207ENST00000368301 COPB1P53618 953 aaKnown RBP20.39■□□□□ 0.86
LMNA-207ENST00000368301 KCNJ12Q14500 433 aa20.39■□□□□ 0.86
LMNA-207ENST00000368301 TCP11X2Q5H9J9 407 aa20.39■□□□□ 0.86
LMNA-207ENST00000368301 DACT2Q5SW24 774 aa20.39■□□□□ 0.86
LMNA-207ENST00000368301 FCHSD1Q86WN1 690 aa20.39■□□□□ 0.86
LMNA-207ENST00000368301 AK8Q96MA6 479 aa20.39■□□□□ 0.86
LMNA-207ENST00000368301 CTAGE1Q96RT6 745 aa20.39■□□□□ 0.86
LMNA-207ENST00000368301 FAM198AQ9UFP1 575 aa20.39■□□□□ 0.86
LMNA-207ENST00000368301 GREB1LQ9C091 1923 aaPredicted RBP20.39■□□□□ 0.86
LMNA-207ENST00000368301 N4BP3O15049 544 aa20.39■□□□□ 0.85
LMNA-207ENST00000368301 ECE2O60344 883 aa20.39■□□□□ 0.85
LMNA-207ENST00000368301 GYPCP04921 128 aa20.39■□□□□ 0.85
LMNA-207ENST00000368301 CASP14P31944 242 aa20.39■□□□□ 0.85
LMNA-207ENST00000368301 FXR1P51114 621 aaKnown RBP eCLIP20.39■□□□□ 0.855e-7■■■■□ 19.8
LMNA-207ENST00000368301 FILIP1LQ4L180 1135 aa20.39■□□□□ 0.85
LMNA-207ENST00000368301 PDCL2Q8N4E4 241 aa20.39■□□□□ 0.85
LMNA-207ENST00000368301 MTMR9Q96QG7 549 aa20.39■□□□□ 0.85
LMNA-207ENST00000368301 RNF225M0QZC1 329 aaPredicted RBP20.38■□□□□ 0.85
LMNA-207ENST00000368301 RAD21O60216 631 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 KCNB1Q14721 858 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 PPFIBP1Q86W92 1011 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 L2HGDHQ9H9P8 463 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 MYO3BQ8WXR4 1341 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 PNMA6FA0A0J9YX94 578 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 A0A0U1RQJ8 604 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 LRRC10BA6NIK2 292 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 CCP110O43303 1012 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 RHOBTB3O94955 611 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 TNNI2P48788 182 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 RAD9BQ6WBX8 426 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 FLAD1Q8NFF5 587 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 ATRIPQ8WXE1 791 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 GJA10Q969M2 543 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 EEF2KMTQ96G04 330 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 TRIM9Q9C026 710 aa20.38■□□□□ 0.85
LMNA-207ENST00000368301 SYCP1Q15431 976 aa20.37■□□□□ 0.85
LMNA-207ENST00000368301 CALCRLQ16602 461 aa20.37■□□□□ 0.85
LMNA-207ENST00000368301 GIMAP8Q8ND71 665 aaPredicted RBP20.37■□□□□ 0.85
LMNA-207ENST00000368301 HPS3Q969F9 1004 aa20.37■□□□□ 0.85
LMNA-207ENST00000368301 hCG_1984214I3L0E3 225 aa20.37■□□□□ 0.85
LMNA-207ENST00000368301 ZSCAN12O43309 604 aa20.37■□□□□ 0.85
LMNA-207ENST00000368301 MFAP3LO75121 409 aa20.37■□□□□ 0.85
LMNA-207ENST00000368301 AOC3Q16853 763 aa20.37■□□□□ 0.85
LMNA-207ENST00000368301 CCDC93Q567U6 631 aa20.37■□□□□ 0.85
LMNA-207ENST00000368301 ZNF713Q8N859 430 aaPredicted RBP20.37■□□□□ 0.85
LMNA-207ENST00000368301 PANX2Q96RD6 677 aa20.37■□□□□ 0.85
LMNA-207ENST00000368301 MRPL44Q9H9J2 332 aaKnown RBP20.37■□□□□ 0.85
LMNA-207ENST00000368301 SLU7O95391 586 aaKnown RBP20.36■□□□□ 0.85
LMNA-207ENST00000368301 PPP4R3BQ5MIZ7 849 aa20.36■□□□□ 0.85
LMNA-207ENST00000368301 STRIP1Q5VSL9 837 aa20.36■□□□□ 0.85
LMNA-207ENST00000368301 RIC8AQ9NPQ8 531 aa20.36■□□□□ 0.85
LMNA-207ENST00000368301 POTEMA6NI47 508 aa20.36■□□□□ 0.85
LMNA-207ENST00000368301 H0YIN7 160 aa20.36■□□□□ 0.85
LMNA-207ENST00000368301 FCER1AP12319 257 aa20.36■□□□□ 0.85
LMNA-207ENST00000368301 EEF2P13639 858 aaKnown RBP20.36■□□□□ 0.85
LMNA-207ENST00000368301 GRB10Q13322 594 aa20.36■□□□□ 0.85
LMNA-207ENST00000368301 UIMC1Q96RL1 719 aa20.36■□□□□ 0.85
LMNA-207ENST00000368301 WDR24Q96S15 920 aa20.36■□□□□ 0.85
LMNA-207ENST00000368301 NUDT12Q9BQG2 462 aa20.36■□□□□ 0.85
LMNA-207ENST00000368301 EHD4Q9H223 541 aa20.36■□□□□ 0.85
LMNA-207ENST00000368301 PHLPP2Q6ZVD8 1323 aa20.35■□□□□ 0.85
LMNA-207ENST00000368301 ASIC1P78348 528 aa20.35■□□□□ 0.85
LMNA-207ENST00000368301 STK4Q13043 487 aa20.35■□□□□ 0.85
LMNA-207ENST00000368301 ZSCAN29Q8IWY8 852 aaPredicted RBP20.35■□□□□ 0.85
LMNA-207ENST00000368301 PNMA5Q96PV4 448 aa20.35■□□□□ 0.85
LMNA-207ENST00000368301 ZNF646O15015 1829 aaPredicted RBP20.35■□□□□ 0.85
LMNA-207ENST00000368301 PDE4DQ08499 809 aa20.35■□□□□ 0.85
LMNA-207ENST00000368301 ELF2Q15723 593 aa20.35■□□□□ 0.85
LMNA-207ENST00000368301 SIAH1Q8IUQ4 282 aa20.35■□□□□ 0.85
LMNA-207ENST00000368301 CUEDC2Q9H467 287 aa20.35■□□□□ 0.85
LMNA-207ENST00000368301 BLOC1S4Q9NUP1 217 aa20.35■□□□□ 0.85
LMNA-207ENST00000368301 LRWD1Q9UFC0 647 aa20.35■□□□□ 0.85
LMNA-207ENST00000368301 H7C1D1 291 aa20.34■□□□□ 0.85
LMNA-207ENST00000368301 ZBTB5O15062 677 aa20.34■□□□□ 0.85
LMNA-207ENST00000368301 MYL1P05976 194 aa20.34■□□□□ 0.85
LMNA-207ENST00000368301 CLK2P49760 499 aaKnown RBP20.34■□□□□ 0.85
LMNA-207ENST00000368301 TTI2Q6NXR4 508 aa20.34■□□□□ 0.85
LMNA-207ENST00000368301 ERO1AQ96HE7 468 aa20.34■□□□□ 0.85
LMNA-207ENST00000368301 TRIM47Q96LD4 638 aa20.34■□□□□ 0.85
LMNA-207ENST00000368301 DUSP9Q99956 384 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms