RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 CEP104O60308 925 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 CD19P15391 556 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 ADRA2BP18089 450 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 TBC1D10BQ4KMP7 808 aaPredicted RBP13.61□□□□□ -0.23
PTPRK-203ENST00000368207 SEL1L2Q5TEA6 688 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 C8orf74Q6P047 294 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 OTUD6AQ7L8S5 288 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 TIGD1Q96MW7 591 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 TMEM47Q9BQJ4 181 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 ZDHHC9Q9Y397 364 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 COL4A3BPQ9Y5P4 624 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 BRDTQ58F21 947 aaPredicted RBP13.61□□□□□ -0.23
PTPRK-203ENST00000368207 NCAPG2Q86XI2 1143 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 TICAM2Q86XR7 235 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 ATRIPQ8WXE1 791 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 DCPSQ96C86 337 aaKnown RBP13.61□□□□□ -0.23
PTPRK-203ENST00000368207 PAIP2Q9BPZ3 127 aaKnown RBP13.61□□□□□ -0.23
PTPRK-203ENST00000368207 NOD1Q9Y239 953 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 RPAP1Q9BWH6 1393 aaPredicted RBP13.61□□□□□ -0.23
PTPRK-203ENST00000368207 IQGAP1P46940 1657 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 OPA1O60313 960 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 GH2P01242 217 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 KRT19P08727 400 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 DEPTORQ8TB45 409 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 TRIM31Q9BZY9 425 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 LY9Q9HBG7 655 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 VPS18Q9P253 973 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 RABGAP1Q9Y3P9 1069 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 SRPRBQ9Y5M8 271 aaKnown RBP13.61□□□□□ -0.23
PTPRK-203ENST00000368207 IQSEC2Q5JU85 1478 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 MEIS1O00470 390 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 ATP2C2O75185 946 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 MYRIPQ8NFW9 859 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 CCDC127Q96BQ5 260 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 SUGCTQ9HAC7 445 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 MAN1B1Q9UKM7 699 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 ZHX1Q9UKY1 873 aaPredicted RBP13.6□□□□□ -0.23
PTPRK-203ENST00000368207 TECPR2O15040 1411 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 BCRP11274 1271 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 CRKP46108 304 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 COPB1P53618 953 aaKnown RBP13.6□□□□□ -0.23
PTPRK-203ENST00000368207 PTPROQ16827 1216 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 ZNF34Q8IZ26 560 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 TRIM6Q9C030 488 aaPredicted RBP13.6□□□□□ -0.23
PTPRK-203ENST00000368207 PREX1Q8TCU6 1659 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 LAD1O00515 517 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 GPSM2P81274 684 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 CALCOCO2Q13137 446 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 ITPK1Q13572 414 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 ODR4Q5SWX8 454 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 CERKQ8TCT0 537 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 CCDC77Q9BR77 488 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 PLCD4Q9BRC7 762 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 IL25Q9H293 177 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 CAMTA2O94983 1202 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 GNA14O95837 355 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 CFAP58Q5T655 872 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 METTL13Q8N6R0 699 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.6□□□□□ -0.23
PTPRK-203ENST00000368207 CCDC51Q96ER9 411 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 TUBGCP2Q9BSJ2 902 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 MYO1AQ9UBC5 1043 aa13.6□□□□□ -0.23
PTPRK-203ENST00000368207 SPATA31A1Q5TZJ5 1347 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 USP17L5A8MUK1 530 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 ABCB4P21439 1286 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 HOXA13P31271 388 aaPredicted RBP13.59□□□□□ -0.23
PTPRK-203ENST00000368207 STAT2P52630 851 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 CDC37Q16543 378 aaPredicted RBP13.59□□□□□ -0.23
PTPRK-203ENST00000368207 OXER1Q8TDS5 423 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 CNOT6LQ96LI5 555 aaKnown RBP13.59□□□□□ -0.23
PTPRK-203ENST00000368207 PLEKHA4Q9H4M7 779 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 PPP2R2CQ9Y2T4 447 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 ATP2A1O14983 1001 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 TUBBP07437 444 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 ERCC5P28715 1186 aaPredicted RBP13.59□□□□□ -0.23
PTPRK-203ENST00000368207 CASP14P31944 242 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 STAT1P42224 750 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 POLR2FP61218 127 aaKnown RBP13.59□□□□□ -0.23
PTPRK-203ENST00000368207 KLHL7Q8IXQ5 586 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 ANKRD13CQ8N6S4 541 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 SYDE2Q5VT97 1194 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 CIAPIN1Q6FI81 312 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 KRT26Q7Z3Y9 468 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 FOXP4Q8IVH2 680 aaPredicted RBP13.59□□□□□ -0.23
PTPRK-203ENST00000368207 U2AF1L4Q8WU68 220 aaKnown RBP13.59□□□□□ -0.23
PTPRK-203ENST00000368207 AK8Q96MA6 479 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 ZNF577Q9BSK1 485 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 PLA2G12BQ9BX93 195 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 SAMSN1Q9NSI8 373 aaKnown RBP13.59□□□□□ -0.23
PTPRK-203ENST00000368207 CACTINQ8WUQ7 758 aaKnown RBP13.59□□□□□ -0.23
PTPRK-203ENST00000368207 USTQ9Y2C2 406 aa13.59□□□□□ -0.23
PTPRK-203ENST00000368207 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.23
PTPRK-203ENST00000368207 ZEB2O60315 1214 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 CAPN2P17655 700 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 ALX1Q15699 326 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 CALCOCO1Q9P1Z2 691 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 MTRF1LQ9UGC7 380 aaKnown RBP13.58□□□□□ -0.24
PTPRK-203ENST00000368207 TRPC6Q9Y210 931 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTPRK-203ENST00000368207 ZNF609O15014 1411 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms