RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 CYLC1P35663 651 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-202ENST00000367279 MATR3P43243 847 aaKnown RBP eCLIP13.79□□□□□ -0.2
PTPN7-202ENST00000367279 DNM2P50570 870 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 CCDC96Q2M329 555 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 ANKRD40Q6AI12 368 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 MMS19Q96T76 1030 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 DEF6Q9H4E7 631 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 SAR1BQ9Y6B6 198 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 DUSP10Q9Y6W6 482 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 PHLPP1O60346 1717 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 KRT86O43790 486 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 CAPN2P17655 700 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 HERVK_113P62684 666 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 TUBB2AQ13885 445 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 ZSCAN26Q16670 478 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 SLC35G1Q2M3R5 365 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 FKBP15Q5T1M5 1219 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 GSPT2Q8IYD1 628 aaKnown RBP13.79□□□□□ -0.2
PTPN7-202ENST00000367279 P2RX5Q93086 422 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 TUBB2BQ9BVA1 445 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 GBP3Q9H0R5 595 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 HAUS4Q9H6D7 363 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 FAM207AQ9NSI2 230 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-202ENST00000367279 FRMPD2Q68DX3 1309 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-202ENST00000367279 ZNF185O15231 689 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 MARCH6O60337 910 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 KRT83P78385 493 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 MRPS25P82663 173 aaKnown RBP13.79□□□□□ -0.2
PTPN7-202ENST00000367279 ATP2B2Q01814 1243 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 NONOQ15233 471 aaKnown RBP eCLIP13.79□□□□□ -0.2
PTPN7-202ENST00000367279 LRRC15Q8TF66 581 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 TANGO6Q9C0B7 1094 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 THAP9Q9H5L6 903 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 MMRN2Q9H8L6 949 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 NHEJ1Q9H9Q4 299 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-202ENST00000367279 TMEM260Q9NX78 707 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 BARHL2Q9NY43 387 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 KLRC4O43908 158 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 SSBP05455 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
PTPN7-202ENST00000367279 KRT26Q7Z3Y9 468 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 MSANTD4Q8NCY6 345 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 SMCR8Q8TEV9 937 aaPredicted RBP13.78□□□□□ -0.2
PTPN7-202ENST00000367279 CALML4Q96GE6 196 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 EYA3Q99504 573 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 SH3GLB2Q9NR46 395 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 MYO1AQ9UBC5 1043 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 CAPN11Q9UMQ6 739 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 DNA2P51530 1060 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 NAP1L1P55209 391 aaKnown RBP13.78□□□□□ -0.2
PTPN7-202ENST00000367279 SPA17Q15506 151 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 WDR59Q6PJI9 974 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 LEKR1Q6ZMV7 388 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 GIMAP8Q8ND71 665 aaPredicted RBP13.78□□□□□ -0.2
PTPN7-202ENST00000367279 CCDC42Q96M95 316 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 PIGSQ96S52 555 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 LACRTQ9GZZ8 138 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 C6orf50Q9HD87 102 aa13.78□□□□□ -0.2
PTPN7-202ENST00000367279 NFIXQ14938 502 aa13.77□□□□□ -0.2
PTPN7-202ENST00000367279 TTI2Q6NXR4 508 aa13.77□□□□□ -0.2
PTPN7-202ENST00000367279 GOLGA6L1Q8N7Z2 621 aa13.77□□□□□ -0.2
PTPN7-202ENST00000367279 TBCKQ8TEA7 893 aa13.77□□□□□ -0.2
PTPN7-202ENST00000367279 RRP36Q96EU6 259 aaKnown RBP13.77□□□□□ -0.2
PTPN7-202ENST00000367279 TRIM34Q9BYJ4 488 aa13.77□□□□□ -0.2
PTPN7-202ENST00000367279 L1RE1Q9UN81 338 aa13.77□□□□□ -0.2
PTPN7-202ENST00000367279 NHSL1Q5SYE7 1610 aa13.77□□□□□ -0.2
PTPN7-202ENST00000367279 A0A1B0GUL6 1792 aa13.77□□□□□ -0.2
PTPN7-202ENST00000367279 PDS5AQ29RF7 1337 aaKnown RBP13.77□□□□□ -0.2
PTPN7-202ENST00000367279 BICDL2A1A5D9 508 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 MAP2K7O14733 419 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 RHOBTB3O94955 611 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 PLEKP08567 350 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-202ENST00000367279 KIF5AQ12840 1032 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 TEX11Q8IYF3 940 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 WDR66Q8TBY9 1149 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 DUSP9Q99956 384 aaKnown RBP13.77□□□□□ -0.21
PTPN7-202ENST00000367279 ACBD3Q9H3P7 528 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 COL14A1Q05707 1796 aaKnown RBP13.77□□□□□ -0.21
PTPN7-202ENST00000367279 RCCD1A6NED2 376 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 NKRFO15226 690 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTPN7-202ENST00000367279 CCNE1P24864 410 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 BTDP43251 543 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 PICALMQ13492 652 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 KCNB1Q14721 858 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 POTEDQ86YR6 584 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 C2CD5Q86YS7 1000 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 UBXN6Q9BZV1 441 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 TRIM9Q9C026 710 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 KBTBD4Q9NVX7 518 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 LRWD1Q9UFC0 647 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 RAB21Q9UL25 225 aa13.77□□□□□ -0.21
PTPN7-202ENST00000367279 LRRIQ3A6PVS8 624 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-202ENST00000367279 C2orf54Q08AI8 447 aa13.76□□□□□ -0.21
PTPN7-202ENST00000367279 ENOX2Q16206 610 aaKnown RBP13.76□□□□□ -0.21
PTPN7-202ENST00000367279 KRT25Q7Z3Z0 450 aa13.76□□□□□ -0.21
PTPN7-202ENST00000367279 NEK8Q86SG6 692 aa13.76□□□□□ -0.21
PTPN7-202ENST00000367279 FAM114A1Q8IWE2 563 aa13.76□□□□□ -0.21
PTPN7-202ENST00000367279 ANKRD13CQ8N6S4 541 aa13.76□□□□□ -0.21
PTPN7-202ENST00000367279 COA7Q96BR5 231 aa13.76□□□□□ -0.21
PTPN7-202ENST00000367279 DHTKD1Q96HY7 919 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-202ENST00000367279 CCSER1Q9C0I3 900 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms