RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 ZNF713Q8N859 430 aaPredicted RBP18.2■□□□□ 0.5
SCAF8-201ENST00000367178 PROCA1Q8NCQ7 364 aaPredicted RBP18.2■□□□□ 0.5
SCAF8-201ENST00000367178 GPR101Q96P66 508 aaPredicted RBP18.2■□□□□ 0.5
SCAF8-201ENST00000367178 UBXN2AP68543 259 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 DMP1Q13316 513 aaPredicted RBP18.2■□□□□ 0.5
SCAF8-201ENST00000367178 CCDC6Q16204 474 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 SUPT20HL1Q3ZLR7 823 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 PPP1R21Q6ZMI0 780 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 LINC00301Q8NCQ3 95 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 CCDC127Q96BQ5 260 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 EEF2KMTQ96G04 330 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 SMC6Q96SB8 1091 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 DESI2Q9BSY9 194 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 RCOR1Q9UKL0 485 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 USP17L3A6NCW0 530 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 USP17L4A6NCW7 530 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 LARGE1O95461 756 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 ABCB4P21439 1286 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 USP14P54578 494 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 KCTD2Q14681 263 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 TNS3Q68CZ2 1445 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 USP17L1Q7RTZ2 530 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 TRPM1Q7Z4N2 1603 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 NRBP2Q9NSY0 501 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 ATP5DP30049 168 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 POLGP54098 1239 aaPredicted RBP18.19■□□□□ 0.5
SCAF8-201ENST00000367178 CCDC121Q6ZUS5 278 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 TICAM2Q86XR7 235 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 C1orf112Q9NSG2 853 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 LRRIQ4A6NIV6 560 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 PRPF3O43395 683 aaKnown RBP18.19■□□□□ 0.5
SCAF8-201ENST00000367178 IPO4Q8TEX9 1081 aaKnown RBP18.19■□□□□ 0.5
SCAF8-201ENST00000367178 COA7Q96BR5 231 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 MASTLQ96GX5 879 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 ADPGKQ9BRR6 497 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 ST7Q9NRC1 585 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 SNAP23O00161 211 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 STK10O94804 968 aaKnown RBP18.19■□□□□ 0.5
SCAF8-201ENST00000367178 CCDC105Q8IYK2 499 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 PGBD1Q96JS3 809 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 FTOQ9C0B1 505 aaKnown RBP eCLIP18.19■□□□□ 0.57e-6■■■■□ 25.5
SCAF8-201ENST00000367178 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.19■□□□□ 0.5
SCAF8-201ENST00000367178 SAMD15Q9P1V8 674 aa18.19■□□□□ 0.5
SCAF8-201ENST00000367178 CLUL1Q15846 466 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 SYNE4Q8N205 404 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 CEP63Q96MT8 703 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 CCDC94Q9BW85 323 aaPredicted RBP18.18■□□□□ 0.5
SCAF8-201ENST00000367178 RPAP1Q9BWH6 1393 aaPredicted RBP18.18■□□□□ 0.5
SCAF8-201ENST00000367178 HPDP32754 393 aaPredicted RBP18.18■□□□□ 0.5
SCAF8-201ENST00000367178 TIGD1Q96MW7 591 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 ZNF577Q9BSK1 485 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 OGFRQ9NZT2 677 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 AMFRQ9UKV5 643 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 SAR1BQ9Y6B6 198 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 DLATP10515 647 aaKnown RBP18.18■□□□□ 0.5
SCAF8-201ENST00000367178 POLR2FP61218 127 aaKnown RBP18.18■□□□□ 0.5
SCAF8-201ENST00000367178 TRIM58Q8NG06 486 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 PPM1EQ8WY54 764 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 SERPINA10Q9UK55 444 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 CDK8P49336 464 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 TTLL6Q8N841 843 aa18.18■□□□□ 0.5
SCAF8-201ENST00000367178 FAM170AA1A519 330 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 CYP19A1P11511 503 aaPredicted RBP18.17■□□□□ 0.5
SCAF8-201ENST00000367178 YARSP54577 528 aaKnown RBP18.17■□□□□ 0.5
SCAF8-201ENST00000367178 PAK2Q13177 524 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 BRIP1Q9BX63 1249 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 ATP6V0A1Q93050 837 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 MINPP1Q9UNW1 487 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 ALDH3A1P30838 453 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 STAT2P52630 851 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 COL15A1P39059 1388 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 TNNC2P02585 160 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 FOXP4Q8IVH2 680 aaPredicted RBP18.17■□□□□ 0.5
SCAF8-201ENST00000367178 PPM1KQ8N3J5 372 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 WDR11Q9BZH6 1224 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 UNC13BO14795 1591 aa18.17■□□□□ 0.5
SCAF8-201ENST00000367178 TMOD1P28289 359 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 COPB1P53618 953 aaKnown RBP18.16■□□□□ 0.5
SCAF8-201ENST00000367178 FAM160B1Q5W0V3 765 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 DGKHQ86XP1 1220 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 MYRIPQ8NFW9 859 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 MRRFQ96E11 262 aaKnown RBP18.16■□□□□ 0.5
SCAF8-201ENST00000367178 TRIM7Q9C029 511 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 ATF5Q9Y2D1 282 aaPredicted RBP18.16■□□□□ 0.5
SCAF8-201ENST00000367178 CDHR2Q9BYE9 1310 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 TULP4Q9NRJ4 1543 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 SLFN14P0C7P3 912 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 NT5C2P49902 561 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 AIFM3Q96NN9 605 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 NACA2Q9H009 215 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 CYP2E1P05181 493 aaPredicted RBP18.16■□□□□ 0.5
SCAF8-201ENST00000367178 RNF169Q8NCN4 708 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 AFF2P51816 1311 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 PRDX5P30044 214 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 CCNA1P78396 465 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 SYDE2Q5VT97 1194 aa18.16■□□□□ 0.5
SCAF8-201ENST00000367178 CIAPIN1Q6FI81 312 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms