RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TBCKQ8TEA7 893 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 ADD3Q9UEY8 706 aaKnown RBP20.48■□□□□ 0.87
CLIP2-202ENST00000361545 ARHGAP31Q2M1Z3 1444 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 CDK8P49336 464 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 SYDE2Q5VT97 1194 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 PEX26Q7Z412 305 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 CCDC125Q86Z20 511 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 IFIH1Q9BYX4 1025 aaKnown RBP20.48■□□□□ 0.87
CLIP2-202ENST00000361545 C1orf112Q9NSG2 853 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 H0YCG3 227 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 ARHGAP6O43182 974 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 ACTN4O43707 911 aaKnown RBP20.48■□□□□ 0.87
CLIP2-202ENST00000361545 SNAP25P60880 206 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 SIRT2Q8IXJ6 389 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 GOLGA5Q8TBA6 731 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 POMGNT1Q8WZA1 660 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 CELF1Q92879 486 aaKnown RBP20.48■□□□□ 0.87
CLIP2-202ENST00000361545 IMPACTQ9P2X3 320 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 ZNF521Q96K83 1311 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 GABPAQ06546 454 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 DAAM2Q86T65 1068 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 MINPP1Q9UNW1 487 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 AKT3Q9Y243 479 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 AP5M1Q9H0R1 490 aa20.47■□□□□ 0.87
CLIP2-202ENST00000361545 UTP11Q9Y3A2 253 aaKnown RBP20.47■□□□□ 0.87
CLIP2-202ENST00000361545 PRDX5P30044 214 aa20.47■□□□□ 0.87
CLIP2-202ENST00000361545 PPM1KQ8N3J5 372 aa20.47■□□□□ 0.87
CLIP2-202ENST00000361545 ATP6V0A1Q93050 837 aa20.47■□□□□ 0.87
CLIP2-202ENST00000361545 SLC10A4Q96EP9 437 aa20.47■□□□□ 0.87
CLIP2-202ENST00000361545 CARMIL3Q8ND23 1372 aa20.47■□□□□ 0.87
CLIP2-202ENST00000361545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.47■□□□□ 0.87
CLIP2-202ENST00000361545 COBLO75128 1261 aa20.47■□□□□ 0.87
CLIP2-202ENST00000361545 CYP19A1P11511 503 aaPredicted RBP20.47■□□□□ 0.87
CLIP2-202ENST00000361545 NSUN7Q8NE18 718 aaKnown RBP20.47■□□□□ 0.87
CLIP2-202ENST00000361545 PPANQ9NQ55 473 aaKnown RBP20.47■□□□□ 0.87
CLIP2-202ENST00000361545 STIM2Q9P246 746 aa20.47■□□□□ 0.87
CLIP2-202ENST00000361545 VPS18Q9P253 973 aa20.47■□□□□ 0.87
CLIP2-202ENST00000361545 ZNF445P59923 1031 aa20.47■□□□□ 0.87
CLIP2-202ENST00000361545 SH3RF3Q8TEJ3 882 aaPredicted RBP20.47■□□□□ 0.87
CLIP2-202ENST00000361545 HNRNPDLO14979 420 aaKnown RBP20.46■□□□□ 0.87
CLIP2-202ENST00000361545 CACNB1Q02641 598 aaPredicted RBP20.46■□□□□ 0.87
CLIP2-202ENST00000361545 EN1Q05925 392 aaPredicted RBP20.46■□□□□ 0.87
CLIP2-202ENST00000361545 ZNF341Q9BYN7 854 aa20.46■□□□□ 0.87
CLIP2-202ENST00000361545 NUCKS1Q9H1E3 243 aaKnown RBP20.46■□□□□ 0.87
CLIP2-202ENST00000361545 SH2B2O14492 632 aaPredicted RBP20.46■□□□□ 0.87
CLIP2-202ENST00000361545 NR5A1Q13285 461 aa20.46■□□□□ 0.87
CLIP2-202ENST00000361545 RPS6KA1Q15418 735 aa20.46■□□□□ 0.87
CLIP2-202ENST00000361545 AOC3Q16853 763 aa20.46■□□□□ 0.87
CLIP2-202ENST00000361545 SLC7A3Q8WY07 619 aa20.46■□□□□ 0.87
CLIP2-202ENST00000361545 PPM1EQ8WY54 764 aa20.46■□□□□ 0.87
CLIP2-202ENST00000361545 FOXP1Q9H334 677 aaPredicted RBP20.46■□□□□ 0.87
CLIP2-202ENST00000361545 ODF2LQ9ULJ1 636 aa20.46■□□□□ 0.87
CLIP2-202ENST00000361545 SLFNL1Q499Z3 407 aa20.46■□□□□ 0.87
CLIP2-202ENST00000361545 GBP6Q6ZN66 633 aa20.46■□□□□ 0.87
CLIP2-202ENST00000361545 NSMCE1Q8WV22 266 aa20.46■□□□□ 0.87
CLIP2-202ENST00000361545 CRKP46108 304 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 UBE2SQ16763 222 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 TXNRD1Q16881 649 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 GEN1Q17RS7 908 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 SCYL2Q6P3W7 929 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 RSPH14Q9UHP6 348 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 ADCY10Q96PN6 1610 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 CCDC6Q16204 474 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 CFAP157Q5JU67 520 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 TDRD3Q9H7E2 651 aaKnown RBP20.45■□□□□ 0.86
CLIP2-202ENST00000361545 INO80B-WBP1J3KQ70 363 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 GH2P01242 217 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 INO80BQ9C086 356 aaPredicted RBP20.45■□□□□ 0.86
CLIP2-202ENST00000361545 CPLX4Q7Z7G2 160 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 FOXP4Q8IVH2 680 aaPredicted RBP20.45■□□□□ 0.86
CLIP2-202ENST00000361545 CCDC105Q8IYK2 499 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 CARD6Q9BX69 1037 aa20.45■□□□□ 0.86
CLIP2-202ENST00000361545 CAPN9O14815 690 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 ATF7P17544 494 aaPredicted RBP20.44■□□□□ 0.86
CLIP2-202ENST00000361545 PTPROQ16827 1216 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 SMIM5Q71RC9 77 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 LARP4BQ92615 738 aaKnown RBP20.44■□□□□ 0.86
CLIP2-202ENST00000361545 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.44■□□□□ 0.867e-7■■■■□ 20.2
CLIP2-202ENST00000361545 MEIS1O00470 390 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 ARHGEF6Q15052 776 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 SYCE1Q8N0S2 351 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 SETD1BQ9UPS6 1966 aaKnown RBP20.44■□□□□ 0.86
CLIP2-202ENST00000361545 HOXA13P31271 388 aaPredicted RBP20.44■□□□□ 0.86
CLIP2-202ENST00000361545 CDC37Q16543 378 aaPredicted RBP20.44■□□□□ 0.86
CLIP2-202ENST00000361545 FANCLQ9NW38 375 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 NCAPD2Q15021 1401 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 ECE2O60344 883 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 PSMC4P43686 418 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 POLR2FP61218 127 aaKnown RBP20.44■□□□□ 0.86
CLIP2-202ENST00000361545 CASC4Q6P4E1 433 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 CYP2D6P10635 497 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 TFDP1Q14186 410 aa20.44■□□□□ 0.86
CLIP2-202ENST00000361545 SMC6Q96SB8 1091 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 PLEKHA4Q9H4M7 779 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 ZNF277Q9NRM2 450 aaPredicted RBP20.43■□□□□ 0.86
CLIP2-202ENST00000361545 CDC25AP30304 524 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 BSPRYQ5W0U4 402 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 ANKS4BQ8N8V4 417 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 OR8K1Q8NGG5 319 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 RPS6KC1Q96S38 1066 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms