RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 SNX29Q8TEQ0 813 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 H0Y626 953 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 TRIM16O95361 564 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 STOML1Q9UBI4 398 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 TNNC2P02585 160 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 KSR1Q8IVT5 923 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 C10orf88Q9H8K7 445 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 ATP8B1O43520 1251 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 PRG3Q9Y2Y8 225 aaPredicted RBP9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 RINLQ6ZS11 566 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 ZFYVE19Q96K21 471 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 RTEL1Q9NZ71 1219 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 SUN2Q9UH99 717 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 PGBD1Q96JS3 809 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 TCEANC2Q96MN5 208 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 TLK1Q9UKI8 766 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 KDM2BQ8NHM5 1336 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 MDM2Q00987 491 aaPredicted RBP9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 KIF19Q2TAC6 998 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 CALCRLQ16602 461 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 F6X3S4 739 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 TNNI1P19237 187 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 DNM3Q9UQ16 869 aa9.13□□□□□ -0.95
NCKAP1-202ENST00000361354 ESRRAP11474 423 aaPredicted RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 PICALMQ13492 652 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 CERS3Q8IU89 383 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 CATSPER1Q8NEC5 780 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 CYTH2Q99418 400 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 RASSF10A6NK89 507 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 IRX1P78414 480 aaPredicted RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 LLPHQ9BRT6 129 aaKnown RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 PODNQ7Z5L7 613 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 MYCT1Q8N699 235 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 TTLL11Q8NHH1 800 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 MED10Q9BTT4 135 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 AP2B1P63010 937 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 APLFQ8IW19 511 aaPredicted RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 DHX38Q92620 1227 aaKnown RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 CBX8Q9HC52 389 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 ABCB4P21439 1286 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 CRLF3Q8IUI8 442 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 ST7Q9NRC1 585 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 NT5C3AQ9H0P0 336 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 AP1B1Q10567 949 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 E2F4Q16254 413 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 ARMC2Q8NEN0 867 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 POC1B-GALNT4F8VUJ3 575 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 ESRRBO95718 433 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 ALS2CLQ60I27 953 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 NOSTRINQ8IVI9 506 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 ZNF202O95125 648 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 TMED2Q15363 201 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 KLHL31Q9H511 634 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 PTPN22Q9Y2R2 807 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 CAB39Q9Y376 341 aaPredicted RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 LZTS3O60299 673 aaPredicted RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 CAPRIN1Q14444 709 aaKnown RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 SKAP1Q86WV1 359 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 ZNF174Q15697 407 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 NBPF14Q5TI25 921 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 FAM207AQ9NSI2 230 aaPredicted RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 LZTS1Q9Y250 596 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 YWHAHQ04917 246 aaPredicted RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 EXOC4Q96A65 974 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 TAB2Q9NYJ8 693 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 RHOBTB1O94844 696 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 CAPRIN2Q6IMN6 1127 aaKnown RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 LUZP2Q86TE4 346 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 MCM9Q9NXL9 1143 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 HERC4Q5GLZ8 1057 aaPredicted RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 FMNL1O95466 1100 aaPredicted RBP9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 CREB3L3Q68CJ9 461 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 GUCY2DQ02846 1103 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 SLC9C2Q5TAH2 1124 aa9.12□□□□□ -0.95
NCKAP1-202ENST00000361354 SGK1O00141 431 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 KRT7P08729 469 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 HIF1AQ16665 826 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 MYSM1Q5VVJ2 828 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 FAM180AQ6UWF9 173 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 DEFA1P59665 94 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 DEFA3P59666 94 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 FSCBQ5H9T9 825 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 NUDCD1Q96RS6 583 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 SEPT3Q9UH03 358 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 XPAP23025 273 aaPredicted RBP9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 SPOPLQ6IQ16 392 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 TMEM245Q9H330 911 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 TXNDC2Q86VQ3 553 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 ARHGEF10LQ9HCE6 1279 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 TOM1L1O75674 476 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 NCF2P19878 526 aaPredicted RBP9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 TRIM11Q96F44 468 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 MAPK8IP1Q9UQF2 711 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 NR1D1P20393 614 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 LRMPQ12912 555 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 C1orf146Q5VVC0 180 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 AZI2Q9H6S1 392 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 L3MBTL1Q9Y468 752 aa9.11□□□□□ -0.95
NCKAP1-202ENST00000361354 MAP4P27816 1152 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms