RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 PI4K2BQ8TCG2 481 aa25.06■■□□□ 1.6
CD47-202ENST00000361309 FSD1Q9BTV5 496 aa25.06■■□□□ 1.6
CD47-202ENST00000361309 PBX4Q9BYU1 374 aa25.06■■□□□ 1.6
CD47-202ENST00000361309 GNEQ9Y223 722 aaKnown RBP25.06■■□□□ 1.6
CD47-202ENST00000361309 ERC2O15083 957 aa25.05■■□□□ 1.6
CD47-202ENST00000361309 SNAP25P60880 206 aa25.05■■□□□ 1.6
CD47-202ENST00000361309 ZMYM1Q5SVZ6 1142 aa25.05■■□□□ 1.6
CD47-202ENST00000361309 PSRC1Q6PGN9 363 aaPredicted RBP25.05■■□□□ 1.6
CD47-202ENST00000361309 CXCL17Q6UXB2 119 aa25.05■■□□□ 1.6
CD47-202ENST00000361309 KCTD1Q719H9 257 aa25.05■■□□□ 1.6
CD47-202ENST00000361309 TLK2Q86UE8 772 aa25.05■■□□□ 1.6
CD47-202ENST00000361309 SYMPKQ92797 1274 aaKnown RBP25.05■■□□□ 1.6
CD47-202ENST00000361309 DDX49Q9Y6V7 483 aaKnown RBP25.05■■□□□ 1.6
CD47-202ENST00000361309 PLA2G6O60733 806 aa25.04■■□□□ 1.6
CD47-202ENST00000361309 PTGS1P23219 599 aa25.04■■□□□ 1.6
CD47-202ENST00000361309 SLC43A3Q8NBI5 491 aa25.04■■□□□ 1.6
CD47-202ENST00000361309 OTUD7AQ8TE49 926 aaPredicted RBP25.04■■□□□ 1.6
CD47-202ENST00000361309 INCENPQ9NQS7 918 aa25.04■■□□□ 1.6
CD47-202ENST00000361309 STX8Q9UNK0 236 aa25.04■■□□□ 1.6
CD47-202ENST00000361309 TSPY2A6NKD2 308 aa25.03■■□□□ 1.6
CD47-202ENST00000361309 CTDSPL2Q05D32 466 aa25.03■■□□□ 1.6
CD47-202ENST00000361309 FSCN1Q16658 493 aaKnown RBP25.03■■□□□ 1.6
CD47-202ENST00000361309 MUM1L1Q5H9M0 696 aa25.03■■□□□ 1.6
CD47-202ENST00000361309 PPP4R3BQ5MIZ7 849 aa25.03■■□□□ 1.6
CD47-202ENST00000361309 RCSD1Q6JBY9 416 aa25.03■■□□□ 1.6
CD47-202ENST00000361309 AP5M1Q9H0R1 490 aa25.03■■□□□ 1.6
CD47-202ENST00000361309 IL23AQ9NPF7 189 aa25.03■■□□□ 1.6
CD47-202ENST00000361309 IL17RBQ9NRM6 502 aa25.03■■□□□ 1.6
CD47-202ENST00000361309 PRR12Q9ULL5 1215 aa25.03■■□□□ 1.6
CD47-202ENST00000361309 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.03■■□□□ 1.6
CD47-202ENST00000361309 DYNC1LI2O43237 492 aaPredicted RBP25.02■■□□□ 1.6
CD47-202ENST00000361309 NMT2O60551 498 aa25.02■■□□□ 1.6
CD47-202ENST00000361309 CABYRO75952 493 aa25.02■■□□□ 1.6
CD47-202ENST00000361309 SMPD1P17405 629 aa25.02■■□□□ 1.6
CD47-202ENST00000361309 ITGA7Q13683 1181 aa25.02■■□□□ 1.6
CD47-202ENST00000361309 EEPD1Q7L9B9 569 aa25.02■■□□□ 1.6
CD47-202ENST00000361309 RASGRP2Q7LDG7 609 aa25.02■■□□□ 1.6
CD47-202ENST00000361309 GAS2L1Q99501 681 aaPredicted RBP25.02■■□□□ 1.6
CD47-202ENST00000361309 PDGFCQ9NRA1 345 aa25.02■■□□□ 1.6
CD47-202ENST00000361309 CYP39A1Q9NYL5 469 aa25.02■■□□□ 1.6
CD47-202ENST00000361309 FOXP2O15409 715 aa25.01■■□□□ 1.59
CD47-202ENST00000361309 FBXO16Q8IX29 292 aaPredicted RBP25.01■■□□□ 1.59
CD47-202ENST00000361309 HERVK_113Q902F9 699 aa25.01■■□□□ 1.59
CD47-202ENST00000361309 HIPK3Q9H422 1215 aa25.01■■□□□ 1.59
CD47-202ENST00000361309 PRDM12Q9H4Q4 367 aa25.01■■□□□ 1.59
CD47-202ENST00000361309 MTMR7Q9Y216 660 aa25.01■■□□□ 1.59
CD47-202ENST00000361309 GRIN2DO15399 1336 aa25.01■■□□□ 1.59
CD47-202ENST00000361309 UMODL1Q5DID0 1318 aa25.01■■□□□ 1.59
CD47-202ENST00000361309 CHD7Q9P2D1 2997 aa25.01■■□□□ 1.59
CD47-202ENST00000361309 ZEB2O60315 1214 aa25■■□□□ 1.59
CD47-202ENST00000361309 TJAP1Q5JTD0 557 aa25■■□□□ 1.59
CD47-202ENST00000361309 TMEM63BQ5T3F8 832 aa25■■□□□ 1.59
CD47-202ENST00000361309 IQSEC1Q6DN90 963 aa25■■□□□ 1.59
CD47-202ENST00000361309 TAPT1Q6NXT6 567 aa25■■□□□ 1.59
CD47-202ENST00000361309 PPM1EQ8WY54 764 aa25■■□□□ 1.59
CD47-202ENST00000361309 PRDM6Q9NQX0 595 aa25■■□□□ 1.59
CD47-202ENST00000361309 CXXC1Q9P0U4 656 aaPredicted RBP25■■□□□ 1.59
CD47-202ENST00000361309 FGBP02675 491 aa24.99■■□□□ 1.59
CD47-202ENST00000361309 MUC3AQ02505 3323 aa24.99■■□□□ 1.59
CD47-202ENST00000361309 NSMFQ6X4W1 530 aa24.99■■□□□ 1.59
CD47-202ENST00000361309 PURBQ96QR8 312 aaKnown RBP24.99■■□□□ 1.59
CD47-202ENST00000361309 TRPV6Q9H1D0 765 aa24.99■■□□□ 1.59
CD47-202ENST00000361309 MSRAQ9UJ68 235 aa24.99■■□□□ 1.59
CD47-202ENST00000361309 CCPG1Q9ULG6 757 aa24.99■■□□□ 1.59
CD47-202ENST00000361309 PCDHB15Q9Y5E8 787 aa24.99■■□□□ 1.59
CD47-202ENST00000361309 MX1P20591 662 aa24.98■■□□□ 1.59
CD47-202ENST00000361309 CCL23P55773 120 aa24.98■■□□□ 1.59
CD47-202ENST00000361309 PSMC6P62333 389 aa24.98■■□□□ 1.59
CD47-202ENST00000361309 Q9Y3F1 56 aa24.98■■□□□ 1.59
CD47-202ENST00000361309 B4GALT4O60513 344 aa24.97■■□□□ 1.59
CD47-202ENST00000361309 RANBP6O60518 1105 aaKnown RBP24.97■■□□□ 1.59
CD47-202ENST00000361309 RAB30Q15771 203 aa24.97■■□□□ 1.59
CD47-202ENST00000361309 CCDC96Q2M329 555 aa24.97■■□□□ 1.59
CD47-202ENST00000361309 KIAA1211Q6ZU35 1233 aa24.97■■□□□ 1.59
CD47-202ENST00000361309 OTOP2Q7RTS6 562 aa24.97■■□□□ 1.59
CD47-202ENST00000361309 NOC4LQ9BVI4 516 aaKnown RBP24.97■■□□□ 1.59
CD47-202ENST00000361309 SEZ6LQ9BYH1 1024 aa24.97■■□□□ 1.59
CD47-202ENST00000361309 MTIF3Q9H2K0 278 aaKnown RBP24.97■■□□□ 1.59
CD47-202ENST00000361309 VTA1Q9NP79 307 aa24.97■■□□□ 1.59
CD47-202ENST00000361309 SCN5AQ14524 2016 aa24.96■■□□□ 1.59
CD47-202ENST00000361309 ICAM1P05362 532 aa24.96■■□□□ 1.59
CD47-202ENST00000361309 AKNAD1Q5T1N1 836 aa24.96■■□□□ 1.59
CD47-202ENST00000361309 NKX2-4Q9H2Z4 354 aa24.96■■□□□ 1.59
CD47-202ENST00000361309 ANAPC4Q9UJX5 808 aa24.96■■□□□ 1.59
CD47-202ENST00000361309 NCOR1O75376 2440 aa24.95■■□□□ 1.59
CD47-202ENST00000361309 NOVP48745 357 aa24.95■■□□□ 1.58
CD47-202ENST00000361309 ADGRE1Q14246 886 aa24.95■■□□□ 1.58
CD47-202ENST00000361309 VPS53Q5VIR6 699 aa24.95■■□□□ 1.58
CD47-202ENST00000361309 TTBK2Q6IQ55 1244 aa24.95■■□□□ 1.58
CD47-202ENST00000361309 MORC4Q8TE76 937 aa24.95■■□□□ 1.58
CD47-202ENST00000361309 DCAF4Q8WV16 495 aa24.95■■□□□ 1.58
CD47-202ENST00000361309 WNT8AQ9H1J5 351 aa24.95■■□□□ 1.58
CD47-202ENST00000361309 RANBP17Q9H2T7 1088 aaKnown RBP24.95■■□□□ 1.58
CD47-202ENST00000361309 REV3LO60673 3130 aa24.95■■□□□ 1.58
CD47-202ENST00000361309 SLC16A2P36021 539 aa24.94■■□□□ 1.58
CD47-202ENST00000361309 BAATQ14032 418 aaPredicted RBP24.94■■□□□ 1.58
CD47-202ENST00000361309 YBX2Q9Y2T7 364 aaKnown RBP24.94■■□□□ 1.58
CD47-202ENST00000361309 ORC4O43929 436 aa24.93■■□□□ 1.58
CD47-202ENST00000361309 IGFBP4P22692 258 aa24.93■■□□□ 1.58
CD47-202ENST00000361309 DUSP28Q4G0W2 176 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms