RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 MFAP3LO75121 409 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 GMPSP49915 693 aaPredicted RBP13.99□□□□□ -0.17
UBA3-202ENST00000361055 KARSQ15046 597 aaKnown RBP13.99□□□□□ -0.17
UBA3-202ENST00000361055 BRD3Q15059 726 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 ZNF174Q15697 407 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 TTC38Q5R3I4 469 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 KLHL10Q6JEL2 608 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 SRGAP1Q7Z6B7 1085 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 MTMR14Q8NCE2 650 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 PCDHAC2Q9Y5I4 1007 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 DDX60LQ5H9U9 1706 aaKnown RBP13.98□□□□□ -0.17
UBA3-202ENST00000361055 SEC31AO94979 1220 aaKnown RBP13.98□□□□□ -0.17
UBA3-202ENST00000361055 STX17P56962 302 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 DLGAP5Q15398 846 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 NPY5RQ15761 445 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 TMTC3Q6ZXV5 915 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 TMTC1Q8IUR5 882 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 CEP112Q8N8E3 955 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 ARPP21Q9UBL0 812 aaPredicted RBP13.98□□□□□ -0.17
UBA3-202ENST00000361055 CDC23Q9UJX2 597 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 CCDC151A5D8V7 595 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 SPDYE2BA6NHP3 402 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 PLEKHA8P1O95397 391 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 SPDYE6P0CI01 402 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 ZNF280AP59817 542 aaPredicted RBP13.98□□□□□ -0.17
UBA3-202ENST00000361055 SPAG1Q07617 926 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 PTGDRQ13258 359 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 E2F4Q16254 413 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 CTR9Q6PD62 1173 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 CPLX3Q8WVH0 158 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 HNRNPLLQ8WVV9 542 aaKnown RBP13.98□□□□□ -0.17
UBA3-202ENST00000361055 PRMT6Q96LA8 375 aaPredicted RBP13.98□□□□□ -0.17
UBA3-202ENST00000361055 EPC1Q9H2F5 836 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 MCM9Q9NXL9 1143 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.98□□□□□ -0.17
UBA3-202ENST00000361055 RWDD2AQ9UIY3 292 aa13.98□□□□□ -0.17
UBA3-202ENST00000361055 FLT1P17948 1338 aa13.97□□□□□ -0.17
UBA3-202ENST00000361055 USP17L12C9JPN9 530 aa13.97□□□□□ -0.17
UBA3-202ENST00000361055 USP17L21D6R901 530 aa13.97□□□□□ -0.17
UBA3-202ENST00000361055 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
UBA3-202ENST00000361055 PRDM1O75626 825 aa13.97□□□□□ -0.17
UBA3-202ENST00000361055 SBK1Q52WX2 424 aa13.97□□□□□ -0.17
UBA3-202ENST00000361055 MAPKAPK5Q8IW41 473 aa13.97□□□□□ -0.17
UBA3-202ENST00000361055 FUT8Q9BYC5 575 aa13.97□□□□□ -0.17
UBA3-202ENST00000361055 MYOZ2Q9NPC6 264 aa13.97□□□□□ -0.17
UBA3-202ENST00000361055 CNOT7Q9UIV1 285 aaKnown RBP13.97□□□□□ -0.17
UBA3-202ENST00000361055 ZC3H4Q9UPT8 1303 aaKnown RBP13.97□□□□□ -0.17
UBA3-202ENST00000361055 GTPBP6O43824 516 aaPredicted RBP13.96□□□□□ -0.17
UBA3-202ENST00000361055 ORC4O43929 436 aa13.96□□□□□ -0.17
UBA3-202ENST00000361055 SASH3O75995 380 aa13.96□□□□□ -0.17
UBA3-202ENST00000361055 CASP14P31944 242 aa13.96□□□□□ -0.17
UBA3-202ENST00000361055 MICALL2Q8IY33 904 aa13.96□□□□□ -0.17
UBA3-202ENST00000361055 AMOTL1Q8IY63 956 aa13.96□□□□□ -0.17
UBA3-202ENST00000361055 IDI2Q9BXS1 227 aa13.96□□□□□ -0.17
UBA3-202ENST00000361055 IRX2Q9BZI1 471 aaPredicted RBP13.96□□□□□ -0.17
UBA3-202ENST00000361055 TDRD3Q9H7E2 651 aaKnown RBP13.96□□□□□ -0.17
UBA3-202ENST00000361055 LZTFL1Q9NQ48 299 aa13.96□□□□□ -0.17
UBA3-202ENST00000361055 CALCOCO1Q9P1Z2 691 aa13.96□□□□□ -0.17
UBA3-202ENST00000361055 WNT7AO00755 349 aa13.96□□□□□ -0.18
UBA3-202ENST00000361055 GYPCP04921 128 aa13.96□□□□□ -0.18
UBA3-202ENST00000361055 CASP1P29466 404 aa13.96□□□□□ -0.18
UBA3-202ENST00000361055 CHMP4BP1P59074 171 aa13.96□□□□□ -0.18
UBA3-202ENST00000361055 TRIM14Q14142 442 aa13.96□□□□□ -0.18
UBA3-202ENST00000361055 SMC1AQ14683 1233 aaKnown RBP13.96□□□□□ -0.18
UBA3-202ENST00000361055 ARL6IP4Q66PJ3 421 aaKnown RBP13.96□□□□□ -0.18
UBA3-202ENST00000361055 PDXDC2PQ6P474 469 aa13.96□□□□□ -0.18
UBA3-202ENST00000361055 RMND1Q9NWS8 449 aa13.96□□□□□ -0.18
UBA3-202ENST00000361055 MYO1AQ9UBC5 1043 aa13.96□□□□□ -0.18
UBA3-202ENST00000361055 hCG_1642624A0A1W2PR95 340 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 SMIM22K7EJ46 135 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 NPM3O75607 178 aaKnown RBP13.95□□□□□ -0.18
UBA3-202ENST00000361055 PICALMQ13492 652 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 KRT31Q15323 416 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 RRAGBQ5VZM2 374 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 SRBD1Q8N5C6 995 aaKnown RBP13.95□□□□□ -0.18
UBA3-202ENST00000361055 MSL3Q8N5Y2 521 aaKnown RBP13.95□□□□□ -0.18
UBA3-202ENST00000361055 ANKRD20A12PQ8NF67 263 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 CTCFLQ8NI51 663 aaPredicted RBP13.95□□□□□ -0.18
UBA3-202ENST00000361055 ZBED3Q96IU2 234 aaPredicted RBP13.95□□□□□ -0.18
UBA3-202ENST00000361055 RAB21Q9UL25 225 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.95□□□□□ -0.18
UBA3-202ENST00000361055 SHTN1A0MZ66 631 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 CTAGE9A4FU28 777 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 H7C1D1 291 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 WNT10BO00744 389 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 N4BP3O15049 544 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 FXR1P51114 621 aaKnown RBP eCLIP13.95□□□□□ -0.18
UBA3-202ENST00000361055 NLRP5P59047 1200 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 ZNF569Q5MCW4 686 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 ZNF658Q5TYW1 1059 aaPredicted RBP13.95□□□□□ -0.18
UBA3-202ENST00000361055 C12orf60Q5U649 245 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 DPY19L2Q6NUT2 758 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 CYP26C1Q6V0L0 522 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 SMYD4Q8IYR2 804 aaPredicted RBP13.95□□□□□ -0.18
UBA3-202ENST00000361055 DDX4Q9NQI0 724 aaKnown RBP13.95□□□□□ -0.18
UBA3-202ENST00000361055 GPRC5DQ9NZD1 345 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 TMOD2Q9NZR1 351 aa13.95□□□□□ -0.18
UBA3-202ENST00000361055 CNTNAP5Q8WYK1 1306 aa13.94□□□□□ -0.18
UBA3-202ENST00000361055 MAP2K7O14733 419 aa13.94□□□□□ -0.18
UBA3-202ENST00000361055 DDNO94850 711 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms