RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 CRHR2Q13324 411 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 WWC2Q6AWC2 1192 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 C17orf99Q6UX52 265 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 RIOX2Q8IUF8 465 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 ZNF713Q8N859 430 aaPredicted RBP14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 FAM184AQ8NB25 1140 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 COA7Q96BR5 231 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 AIFM3Q96NN9 605 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 ALG1Q9BT22 464 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 PAGR1Q9BTK6 254 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 TEX13BQ9BXU2 312 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 SPATC1LQ9H0A9 340 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 CCPG1Q9ULG6 757 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 RIPK3Q9Y572 518 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 PCDHA1Q9Y5I3 950 aa14.31□□□□□ -0.12
NIF3L1-201ENST00000359683 STXBP3O00186 592 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 ERVK-9P63128 1117 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 ERVK-24P63145 666 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 FAM110CQ1W6H9 321 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 TKFCQ3LXA3 575 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 SNRNP48Q6IEG0 339 aaKnown RBP14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 HEATR3Q7Z4Q2 680 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 FAM177A1Q8N128 213 aaPredicted RBP14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 ANKRD13CQ8N6S4 541 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 SPRYD3Q8NCJ5 442 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 GPRC5AQ8NFJ5 357 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 GPKOWQ92917 476 aaPredicted RBP eCLIP14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 SHISA4Q96DD7 197 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 SH3GLB2Q9NR46 395 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 KIF3AQ9Y496 699 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 PLS1Q14651 629 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 USH1GQ495M9 461 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 TYW1BQ6NUM6 668 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 CTU1Q7Z7A3 348 aaKnown RBP14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 RGS22Q8NE09 1264 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 IPO9Q96P70 1041 aaKnown RBP14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 MOV10L1Q9BXT6 1211 aaKnown RBP14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 R3HDMLQ9H3Y0 253 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 CWC22Q9HCG8 908 aaKnown RBP14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 CPA4Q9UI42 421 aa14.3□□□□□ -0.12
NIF3L1-201ENST00000359683 ABCB11O95342 1321 aa14.29□□□□□ -0.12
NIF3L1-201ENST00000359683 SLC25A27O95847 323 aa14.29□□□□□ -0.12
NIF3L1-201ENST00000359683 ALAS1P13196 640 aa14.29□□□□□ -0.12
NIF3L1-201ENST00000359683 TAL1P17542 331 aaPredicted RBP14.29□□□□□ -0.12
NIF3L1-201ENST00000359683 PPP1R18Q6NYC8 613 aa14.29□□□□□ -0.12
NIF3L1-201ENST00000359683 SHCBP1Q8NEM2 672 aa14.29□□□□□ -0.12
NIF3L1-201ENST00000359683 CLEC4DQ8WXI8 215 aa14.29□□□□□ -0.12
NIF3L1-201ENST00000359683 VPS54Q9P1Q0 977 aa14.29□□□□□ -0.12
NIF3L1-201ENST00000359683 DAXXQ9UER7 740 aaPredicted RBP14.29□□□□□ -0.12
NIF3L1-201ENST00000359683 MRPL11Q9Y3B7 192 aaKnown RBP14.29□□□□□ -0.12
NIF3L1-201ENST00000359683 ESYT2A0FGR8 921 aa14.28□□□□□ -0.12
NIF3L1-201ENST00000359683 XBP1P17861 261 aa14.28□□□□□ -0.12
NIF3L1-201ENST00000359683 COPB2P35606 906 aa14.28□□□□□ -0.12
NIF3L1-201ENST00000359683 CCNA1P78396 465 aa14.28□□□□□ -0.12
NIF3L1-201ENST00000359683 LARP1BQ659C4 914 aaKnown RBP14.28□□□□□ -0.12
NIF3L1-201ENST00000359683 CHST13Q8NET6 341 aa14.28□□□□□ -0.12
NIF3L1-201ENST00000359683 FBXO18Q8NFZ0 1043 aa14.28□□□□□ -0.12
NIF3L1-201ENST00000359683 CCDC12Q8WUD4 166 aaPredicted RBP14.28□□□□□ -0.12
NIF3L1-201ENST00000359683 TRERF1Q96PN7 1200 aa14.28□□□□□ -0.12
NIF3L1-201ENST00000359683 ZMYND12Q9H0C1 365 aa14.28□□□□□ -0.12
NIF3L1-201ENST00000359683 GJB4Q9NTQ9 266 aa14.28□□□□□ -0.12
NIF3L1-201ENST00000359683 OPLAHO14841 1288 aa14.27□□□□□ -0.12
NIF3L1-201ENST00000359683 TBC1D8O95759 1140 aa14.27□□□□□ -0.12
NIF3L1-201ENST00000359683 PDCP20941 246 aa14.27□□□□□ -0.12
NIF3L1-201ENST00000359683 NAPAP54920 295 aa14.27□□□□□ -0.12
NIF3L1-201ENST00000359683 MUM1L1Q5H9M0 696 aa14.27□□□□□ -0.12
NIF3L1-201ENST00000359683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.27□□□□□ -0.12
NIF3L1-201ENST00000359683 CCDC148Q8NFR7 591 aa14.27□□□□□ -0.12
NIF3L1-201ENST00000359683 C8orf76Q96K31 380 aa14.27□□□□□ -0.12
NIF3L1-201ENST00000359683 PHF20Q9BVI0 1012 aa14.27□□□□□ -0.12
NIF3L1-201ENST00000359683 MAF1Q9H063 256 aa14.27□□□□□ -0.12
NIF3L1-201ENST00000359683 MROH8Q9H579 483 aa14.27□□□□□ -0.12
NIF3L1-201ENST00000359683 RNF146Q9NTX7 359 aa14.27□□□□□ -0.12
NIF3L1-201ENST00000359683 SMCO2A6NFE2 343 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 ERCC3P19447 782 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 SYT1P21579 422 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 SOX10P56693 466 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 GHRHRQ02643 423 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 KRT40Q6A162 431 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 GALNT17Q6IS24 598 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 TEX2Q8IWB9 1127 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 SAMD3Q8N6K7 520 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 SP7Q8TDD2 431 aaPredicted RBP14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 ZNF296Q8WUU4 475 aaPredicted RBP14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 PORCNQ9H237 461 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 FBXO40Q9UH90 709 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 NFIBO00712 420 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 PDIA4P13667 645 aaKnown RBP14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 CALML3P27482 149 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 MRPL12P52815 198 aaKnown RBP14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 NLRP5P59047 1200 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 TRIM29Q14134 588 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 NPY5RQ15761 445 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 NCAPG2Q86XI2 1143 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 MCF2L2Q86YR7 1114 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 TBC1D5Q92609 795 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 GLT8D2Q9H1C3 349 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 ACAD9Q9H845 621 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 PSTPIP2Q9H939 334 aa14.26□□□□□ -0.13
NIF3L1-201ENST00000359683 C6orf50Q9HD87 102 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms